Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22331 Brassica carinata HOM05D008190 ORTHO05D010344 7.6e-39 163.3 80 100.0
C09p20500 Brassica napus HOM05D008190 ORTHO05D010344 7.6e-39 163.3 80 100.0
BolC9t54955H Brassica oleracea HOM05D008190 ORTHO05D010344 7.6e-39 163.3 80 100.0
BcaC04g22332 Brassica carinata HOM05D008190 ORTHO05D010344 5.0e-38 160.6 80 98.8
C09p20480 Brassica napus HOM05D008190 ORTHO05D010344 5.0e-38 160.6 80 98.8
BolC9t54953H Brassica oleracea HOM05D008190 ORTHO05D010344 5.0e-38 160.6 80 98.8
A09p16740 Brassica napus HOM05D008190 ORTHO05D010344 8.4e-38 159.8 80 97.5
A09p16750 Brassica napus HOM05D008190 ORTHO05D010344 8.4e-38 159.8 80 97.5
BraA09t37311Z Brassica rapa HOM05D008190 ORTHO05D010344 8.4e-38 159.8 80 97.5
BraA09t37312Z Brassica rapa HOM05D008190 ORTHO05D010344 8.4e-38 159.8 80 97.5
BcaC04g22333 Brassica carinata HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
BcaC04g22334 Brassica carinata HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
BcaC04g22335 Brassica carinata HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
BcaC04g22336 Brassica carinata HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
BcaC04g22337 Brassica carinata HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
BcaC04g22338 Brassica carinata HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
C09p20450 Brassica napus HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
C09p20460 Brassica napus HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
C09p20470 Brassica napus HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
BolC9t54948H Brassica oleracea HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
BolC9t54950H Brassica oleracea HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
BolC9t54951H Brassica oleracea HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
BolC9t54952H Brassica oleracea HOM05D008190 ORTHO05D010344 4.2e-37 157.5 80 97.5
C09p20440 Brassica napus HOM05D008190 ORTHO05D010344 2.7e-36 154.8 78 97.4
BolC9t54949H Brassica oleracea HOM05D008190 ORTHO05D010344 1.7e-25 119.0 64 95.3
BcaB04g20339 Brassica carinata HOM05D008190 ORTHO05D010344 9.1e-24 113.2 70 75.7
BcaB04g20340 Brassica carinata HOM05D008190 ORTHO05D010344 9.1e-24 113.2 70 75.7
BcaB04g20342 Brassica carinata HOM05D008190 ORTHO05D010344 9.1e-24 113.2 70 75.7
BcaB04g20338 Brassica carinata HOM05D008190 ORTHO05D010344 4.5e-23 110.9 70 74.3
AT1G61566 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 2.5e-21 105.1 74 73.0
Sp2g03040 Schrenkiella parvula HOM05D008190 ORTHO05D010344 2.1e-20 102.1 73 68.5
AL2G14700 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 7.9e-20 100.1 76 67.1
C01p38420 Brassica napus HOM05D008190 ORTHO05D010344 7.9e-20 100.1 72 69.4
BolC1t03807H Brassica oleracea HOM05D008190 ORTHO05D010344 7.9e-20 100.1 72 69.4
BolC1t03808H Brassica oleracea HOM05D008190 ORTHO05D010344 7.9e-20 100.1 72 69.4
AT2G22055 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 2.3e-19 98.6 73 67.1
A01p30280 Brassica napus HOM05D008190 ORTHO05D010344 2.3e-19 98.6 73 67.1
BraA01t03163Z Brassica rapa HOM05D008190 ORTHO05D010344 2.3e-19 98.6 73 67.1
BcaC04g22340 Brassica carinata HOM05D008190 ORTHO05D010344 5.1e-19 97.4 80 63.8
A01p30270 Brassica napus HOM05D008190 ORTHO05D010344 5.1e-19 97.4 72 69.4
C09p20430 Brassica napus HOM05D008190 ORTHO05D010344 5.1e-19 97.4 80 63.8
BolC9t54947H Brassica oleracea HOM05D008190 ORTHO05D010344 5.1e-19 97.4 80 63.8
BraA01t03162Z Brassica rapa HOM05D008190 ORTHO05D010344 5.1e-19 97.4 72 69.4
C01p38410 Brassica napus HOM05D008190 ORTHO05D010344 2.0e-18 95.5 72 68.1
AL2G14690 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 4.4e-18 94.4 73 63.0
Carub.0002s0363 Capsella rubella HOM05D008190 ORTHO05D010344 5.7e-18 94.0 72 65.3
AT1G61563 Arabidopsis thaliana HOM05D008190 ORTHO05D010344 2.2e-17 92.0 81 60.5
CARHR050840 Cardamine hirsuta HOM05D008190 ORTHO05D010344 8.2e-17 90.1 77 57.1
AL8G22740 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 1.1e-16 89.7 74 59.5
BcaB04g20341 Brassica carinata HOM05D008190 ORTHO05D010344 2.4e-16 88.6 57 73.7
Carub.0002s0365 Capsella rubella HOM05D008190 ORTHO05D010344 2.4e-16 88.6 73 63.0
CARHR050830 Cardamine hirsuta HOM05D008190 ORTHO05D010344 3.1e-16 88.2 73 58.9
Thhalv10024096m.g Eutrema salsugineum HOM05D008190 ORTHO05D010344 1.2e-15 86.3 73 58.9
AL2G14720 Arabidopsis lyrata HOM05D008190 ORTHO05D010344 2.0e-15 85.5 76 59.2
BcaC03g13507 Brassica carinata HOM05D008190 ORTHO05D010344 2.0e-15 85.5 72 61.1
BolC2t06606H Brassica oleracea HOM05D008190 ORTHO05D010344 2.0e-15 85.5 72 61.1
BcaC09g50377 Brassica carinata HOM05D008190 ORTHO05D010344 5.9e-15 84.0 72 59.7
A02p02380 Brassica napus HOM05D008190 ORTHO05D010344 1.1e-13 79.7 72 56.9
BraA02t05208Z Brassica rapa HOM05D008190 ORTHO05D010344 1.1e-13 79.7 72 56.9
Thhalv10024053m.g Eutrema salsugineum HOM05D008190 ORTHO05D010344 1.1e-13 79.7 72 55.6
C02p06600 Brassica napus HOM05D008190 ORTHO05D010344 1.9e-13 79.0 73 56.2
Aa31LG2G9270 Aethionema arabicum HOM05D008190 ORTHO05D010344 4.2e-13 77.8 72 56.9
ClCG03G017300 Citrullus lanatus HOM05D009824 ORTHO05D010344 4.5e-07 57.8 72 44.4
CARHR126820 Cardamine hirsuta HOM05D010425 ORTHO05D014400 6.5e-06 53.9 64 39.1


User provided reference genes

Program Settings