Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 8.8e-31 136.3 70 100.0
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 5.7e-30 133.7 70 98.6
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 6.1e-24 113.6 59 98.3
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 3.9e-23 110.9 75 77.3
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 5.1e-23 110.5 75 78.7
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 6.7e-23 110.2 75 76.0
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 1.5e-22 109.0 75 76.0
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 2.0e-22 108.6 75 77.3
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 2.6e-22 108.2 75 77.3
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 2.6e-22 108.2 75 77.3
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 2.6e-22 108.2 75 77.3
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 2.6e-22 108.2 75 77.3
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 1.3e-21 105.9 75 76.0
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 2.2e-21 105.1 75 72.0
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 2.2e-21 105.1 75 72.0
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 2.2e-21 105.1 75 72.0
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 1.1e-20 102.8 75 72.0
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 1.8e-20 102.1 75 69.3
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 2.4e-20 101.7 75 70.7
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 3.1e-20 101.3 75 73.3
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 3.1e-20 101.3 75 73.3
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 4.1e-20 100.9 75 73.3
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 4.1e-20 100.9 75 73.3
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 4.1e-20 100.9 75 70.7
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 5.3e-20 100.5 75 69.3
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 9.1e-20 99.8 75 68.0
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 9.1e-20 99.8 75 69.3
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 1.2e-19 99.4 74 71.6
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 2.0e-19 98.6 75 72.0
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 2.0e-19 98.6 75 72.0
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 2.0e-19 98.6 75 66.7
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 2.6e-19 98.2 75 68.0
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 2.6e-19 98.2 75 66.7
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 2.6e-19 98.2 75 68.0
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 3.4e-19 97.8 75 68.0
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 4.5e-19 97.4 75 68.0
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 4.5e-19 97.4 75 68.0
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 5.9e-19 97.1 75 65.3
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 7.7e-19 96.7 75 68.0
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 7.7e-19 96.7 75 68.0
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 7.7e-19 96.7 75 66.7
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 7.7e-19 96.7 75 64.0
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.7e-19 96.7 77 64.9
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.0e-18 96.3 75 66.7
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 1.0e-18 96.3 74 67.6
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 1.3e-18 95.9 75 64.0
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 1.7e-18 95.5 75 65.3
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 1.7e-18 95.5 75 64.0
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.7e-18 95.5 75 65.3
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 2.2e-18 95.1 75 66.7
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.9e-18 94.7 75 61.3
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.8e-18 94.4 77 64.9
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.8e-18 94.4 75 65.3
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 3.8e-18 94.4 75 64.0
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 5.0e-18 94.0 75 61.3
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 6.5e-18 93.6 75 65.3
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 6.5e-18 93.6 75 64.0
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 6.5e-18 93.6 74 64.9
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 6.5e-18 93.6 75 66.7
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 8.5e-18 93.2 75 66.7
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 8.5e-18 93.2 75 62.7
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 1.1e-17 92.8 75 66.7
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 1.4e-17 92.4 75 60.0
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 1.4e-17 92.4 75 65.3
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.4e-17 92.4 75 65.3
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 1.4e-17 92.4 75 64.0
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 1.9e-17 92.0 75 64.0
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 2.5e-17 91.7 75 65.3
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 2.5e-17 91.7 75 65.3
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 2.5e-17 91.7 75 64.0
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 4.2e-17 90.9 75 64.0
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 4.2e-17 90.9 75 65.3
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 4.2e-17 90.9 75 64.0
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 5.5e-17 90.5 75 64.0
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 5.5e-17 90.5 75 62.7
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 5.5e-17 90.5 75 61.3
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 5.5e-17 90.5 75 65.3
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 7.2e-17 90.1 75 60.0
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 7.2e-17 90.1 75 60.0
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 9.4e-17 89.7 75 64.0
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 9.4e-17 89.7 75 64.0
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 1.2e-16 89.4 75 61.3
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 1.2e-16 89.4 75 65.3
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 1.2e-16 89.4 75 62.7
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 1.2e-16 89.4 77 61.0
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.1e-16 88.6 75 60.0
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 2.1e-16 88.6 75 60.0
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 2.1e-16 88.6 75 64.0
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 2.1e-16 88.6 75 64.0
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 2.1e-16 88.6 75 61.3
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 2.1e-16 88.6 75 61.3
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 2.7e-16 88.2 75 57.3
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 3.6e-16 87.8 75 64.0
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 4.7e-16 87.4 75 60.0
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 6.1e-16 87.0 75 57.3
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 6.1e-16 87.0 75 60.0
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 8.0e-16 86.7 75 61.3
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 8.0e-16 86.7 77 57.1
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 1.0e-15 86.3 75 60.0
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 1.0e-15 86.3 75 58.7
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 1.0e-15 86.3 75 62.7
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 1.0e-15 86.3 75 58.7
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 1.4e-15 85.9 75 61.3
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 1.4e-15 85.9 75 62.7
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.4e-15 85.9 77 57.1
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 1.4e-15 85.9 77 57.1
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 2.3e-15 85.1 75 60.0
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 2.3e-15 85.1 75 61.3
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 3.9e-15 84.3 75 56.0
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 3.9e-15 84.3 75 58.7
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 3.9e-15 84.3 77 57.1
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 8.8e-15 83.2 74 62.2
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 8.8e-15 83.2 75 56.0
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.1e-14 82.8 75 58.7
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.1e-14 82.8 71 64.8
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 1.5e-14 82.4 74 60.8
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 1.5e-14 82.4 75 57.3
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 2.6e-14 81.6 75 57.3
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 3.3e-14 81.3 75 58.7
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 4.4e-14 80.9 73 61.6
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 7.4e-14 80.1 75 54.7
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 7.4e-14 80.1 75 54.7
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 7.4e-14 80.1 75 60.0
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.3e-13 79.3 75 53.3
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 1.3e-13 79.3 66 68.2
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 2.8e-13 78.2 74 56.8
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.7e-13 77.8 70 60.0
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 4.8e-13 77.4 74 58.1
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 4.8e-13 77.4 74 58.1
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 6.3e-13 77.0 74 58.1
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 6.3e-13 77.0 74 58.1
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 6.3e-13 77.0 68 61.8
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 6.3e-13 77.0 75 52.0
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.1e-12 76.3 66 65.2
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 1.8e-12 75.5 56 78.6
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.4e-12 75.1 66 65.2
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 3.1e-12 74.7 75 53.3
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 3.1e-12 74.7 70 61.4
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 5.3e-12 73.9 75 53.3
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 5.3e-12 73.9 77 53.2
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 9.1e-12 73.2 68 52.9
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 1.2e-11 72.8 71 53.5
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.2e-11 72.8 77 54.5
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 1.2e-11 72.8 66 63.6
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 1.6e-11 72.4 66 63.6
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.6e-11 72.4 75 57.3
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 4.5e-11 70.9 63 61.9
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 5.9e-11 70.5 66 59.1
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 2.2e-10 68.6 75 48.0
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 2.9e-10 68.2 75 46.7
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 3.8e-10 67.8 77 46.8
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 5.0e-10 67.4 70 52.9
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 8.5e-10 66.6 75 49.3
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.5e-09 65.9 68 60.3
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 3.2e-09 64.7 64 53.1
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 4.2e-09 64.3 75 42.7
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.2e-08 62.8 68 44.1
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 2.0e-06 55.5 54 61.1


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