Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p20130 Brassica napus HOM05D000161 ORTHO05D000111 2.2e-111 405.6 201 100.0
A09p16570 Brassica napus HOM05D000161 ORTHO05D000111 6.0e-40 168.3 177 57.1
BraA09t37293Z Brassica rapa HOM05D000161 ORTHO05D000111 1.1e-36 157.5 177 53.7
BcaC04g22365 Brassica carinata HOM05D000161 ORTHO05D000111 4.0e-36 155.6 78 96.2
A09p16580 Brassica napus HOM05D000161 ORTHO05D000111 9.5e-30 134.4 176 50.0
BcaB07g31297 Brassica carinata HOM05D000161 ORTHO05D000111 8.1e-29 131.3 145 59.3
AL2G14050 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 5.2e-28 128.6 141 57.4
BcaB07g31296 Brassica carinata HOM05D000161 ORTHO05D000111 1.2e-27 127.5 175 46.9
BcaC04g22366 Brassica carinata HOM05D000161 ORTHO05D000111 9.9e-27 124.4 146 56.8
C09p20120 Brassica napus HOM05D000161 ORTHO05D000111 9.9e-27 124.4 147 56.5
Sp2g02560 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.3e-26 124.0 182 47.8
AT1G62120 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.2e-26 123.2 186 46.2
CARHR050330 Cardamine hirsuta HOM05D000161 ORTHO05D000111 3.8e-26 122.5 195 45.6
CARHR049980 Cardamine hirsuta HOM05D000161 ORTHO05D000111 4.9e-26 122.1 143 53.1
CARHR050310 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.1e-25 120.9 142 53.5
AL2G14060 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 4.2e-25 119.0 141 53.9
A09p16550 Brassica napus HOM05D000161 ORTHO05D000111 9.2e-25 117.9 131 58.0
Aa31LG2G8900 Aethionema arabicum HOM05D000316 ORTHO05D000111 2.7e-24 116.3 139 52.5
AL2G14070 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.5e-24 115.9 142 54.2
BcaB07g31302 Brassica carinata HOM05D000161 ORTHO05D000111 3.5e-24 115.9 140 53.6
CARHR050000 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.0e-23 114.4 141 51.8
BcaC04g22370 Brassica carinata HOM05D000161 ORTHO05D000111 3.0e-23 112.8 140 52.9
C09p20080 Brassica napus HOM05D000161 ORTHO05D000111 3.0e-23 112.8 140 52.9
BolC9t54916H Brassica oleracea HOM05D000161 ORTHO05D000111 3.0e-23 112.8 140 52.9
CARHR050060 Cardamine hirsuta HOM05D000161 ORTHO05D000111 3.0e-23 112.8 194 43.3
Sp2g02600 Schrenkiella parvula HOM05D000161 ORTHO05D000111 3.9e-23 112.5 141 54.6
C03p71120 Brassica napus HOM05D000161 ORTHO05D000111 6.6e-23 111.7 144 52.1
Thhalv10023838m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 6.6e-23 111.7 150 51.3
CARHR050220 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.1e-22 110.9 188 42.6
A06p20610 Brassica napus HOM05D000161 ORTHO05D000111 1.5e-22 110.5 140 51.4
BolC3t19397H Brassica oleracea HOM05D000161 ORTHO05D000111 4.3e-22 109.0 144 51.4
Thhalv10023447m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 4.3e-22 109.0 146 52.1
Carub.0002s0295 Capsella rubella HOM05D000161 ORTHO05D000111 7.3e-22 108.2 187 43.3
Carub.0002s0310 Capsella rubella HOM05D000161 ORTHO05D000111 7.3e-22 108.2 145 50.3
AT1G61990 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 9.6e-22 107.8 142 50.0
C01p39210 Brassica napus HOM05D000161 ORTHO05D000111 9.6e-22 107.8 175 42.9
BraA06t25140Z Brassica rapa HOM05D000161 ORTHO05D000111 9.6e-22 107.8 138 51.4
BcaC04g22764 Brassica carinata HOM05D000161 ORTHO05D000111 1.6e-21 107.1 136 51.5
C09p15550 Brassica napus HOM05D000161 ORTHO05D000111 1.6e-21 107.1 136 51.5
Thhalv10023457m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.6e-21 107.1 146 51.4
BcaB07g31298 Brassica carinata HOM05D000161 ORTHO05D000111 2.1e-21 106.7 98 63.3
Sp5g14790 Schrenkiella parvula HOM05D000161 ORTHO05D000111 2.1e-21 106.7 139 52.5
BcaC04g22364 Brassica carinata HOM05D000161 ORTHO05D000111 3.6e-21 105.9 132 54.5
C09p20140 Brassica napus HOM05D000161 ORTHO05D000111 3.6e-21 105.9 132 54.5
BolC9t54920H Brassica oleracea HOM05D000161 ORTHO05D000111 3.6e-21 105.9 132 54.5
BraA09t36957Z Brassica rapa HOM05D000161 ORTHO05D000111 4.7e-21 105.5 136 50.7
Carub.0002s0311 Capsella rubella HOM05D000161 ORTHO05D000111 4.7e-21 105.5 146 52.7
A09p13110 Brassica napus HOM05D000161 ORTHO05D000111 6.2e-21 105.1 136 51.5
AL2G14100 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 8.1e-21 104.8 135 50.4
BolC3t17768H Brassica oleracea HOM05D000161 ORTHO05D000111 8.1e-21 104.8 190 46.3
Thhalv10023445m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 8.1e-21 104.8 144 52.8
AL2G13820 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.8e-20 103.6 144 49.3
Sp2g02100 Schrenkiella parvula HOM05D000161 ORTHO05D000111 3.1e-20 102.8 150 50.0
CARHR050290 Cardamine hirsuta HOM05D000161 ORTHO05D000111 5.3e-20 102.1 99 59.6
Carub.0002s0305 Capsella rubella HOM05D000161 ORTHO05D000111 6.9e-20 101.7 142 49.3
BcaC01g03202 Brassica carinata HOM05D000161 ORTHO05D000111 1.2e-19 100.9 135 54.1
A01p30850 Brassica napus HOM05D000161 ORTHO05D000111 1.2e-19 100.9 176 42.0
Sp2g02110 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.2e-19 100.9 145 49.0
CARHR050020 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.5e-19 100.5 90 61.1
AL2G13790 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.6e-19 99.8 133 51.9
AL5G26170 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.4e-19 99.4 129 51.9
CARHR050160 Cardamine hirsuta HOM05D000161 ORTHO05D000111 3.4e-19 99.4 131 51.1
Carub.0002s0300 Capsella rubella HOM05D000161 ORTHO05D000111 4.4e-19 99.0 130 53.8
AL2G14080 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 7.6e-19 98.2 145 50.3
Carub.0002s0308 Capsella rubella HOM05D000161 ORTHO05D000111 9.9e-19 97.8 134 50.7
Thhalv10004187m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 9.9e-19 97.8 150 48.7
BcaB04g20384 Brassica carinata HOM05D000161 ORTHO05D000111 2.2e-18 96.7 141 49.6
Sp7g03520 Schrenkiella parvula HOM05D000161 ORTHO05D000111 2.2e-18 96.7 145 48.3
AT1G61980 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 4.9e-18 95.5 131 51.1
BcaB07g31299 Brassica carinata HOM05D000161 ORTHO05D000111 4.9e-18 95.5 134 50.0
Thhalv10023505m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 4.9e-18 95.5 137 49.6
Sp2g02570 Schrenkiella parvula HOM05D000161 ORTHO05D000111 4.9e-18 95.5 99 57.6
AT1G62110 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 6.4e-18 95.1 90 60.0
AL2G13390 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 8.4e-18 94.7 132 51.5
AT3G46950 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.9e-17 93.6 127 50.4
AT5G23930 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.4e-17 93.2 146 47.9
BcaC06g31879 Brassica carinata HOM05D000161 ORTHO05D000111 2.4e-17 93.2 150 48.7
C01p39190 Brassica napus HOM05D000161 ORTHO05D000111 2.4e-17 93.2 133 51.9
BolC1t03869H Brassica oleracea HOM05D000161 ORTHO05D000111 2.4e-17 93.2 133 51.9
A03p67410 Brassica napus HOM05D000161 ORTHO05D000111 4.2e-17 92.4 130 52.3
BraA01t02734Z Brassica rapa HOM05D000161 ORTHO05D000111 4.2e-17 92.4 130 52.3
BraA01t03212Z Brassica rapa HOM05D000161 ORTHO05D000111 4.2e-17 92.4 133 51.1
AT1G61970 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 5.4e-17 92.0 128 50.0
BcaC06g31881 Brassica carinata HOM05D000161 ORTHO05D000111 5.4e-17 92.0 184 39.7
CARHR050280 Cardamine hirsuta HOM05D000161 ORTHO05D000111 5.4e-17 92.0 130 49.2
BcaB07g31330 Brassica carinata HOM05D000161 ORTHO05D000111 7.1e-17 91.7 136 52.2
Sp2g23340 Schrenkiella parvula HOM05D000161 ORTHO05D000111 7.1e-17 91.7 150 46.7
BcaC06g31876 Brassica carinata HOM05D000161 ORTHO05D000111 9.3e-17 91.3 139 48.2
BcaC06g31880 Brassica carinata HOM05D000161 ORTHO05D000111 9.3e-17 91.3 124 53.2
CARHR049990 Cardamine hirsuta HOM05D000161 ORTHO05D000111 9.3e-17 91.3 128 48.4
BcaB08g34472 Brassica carinata HOM05D000161 ORTHO05D000111 1.6e-16 90.5 160 49.4
A09p16240 Brassica napus HOM05D000161 ORTHO05D000111 1.6e-16 90.5 136 51.5
Thhalv10023868m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.6e-16 90.5 145 48.3
AL2G14110 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.1e-16 90.1 131 50.4
CARHR050320 Cardamine hirsuta HOM05D000161 ORTHO05D000111 2.1e-16 90.1 131 45.0
BraA09t37290Z Brassica rapa HOM05D000161 ORTHO05D000111 2.7e-16 89.7 124 49.2
C09p20110 Brassica napus HOM05D000161 ORTHO05D000111 3.5e-16 89.4 138 50.7
Thhalv10024090m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 4.6e-16 89.0 146 45.9
Carub.0002s0249 Capsella rubella HOM05D000161 ORTHO05D000111 6.0e-16 88.6 134 51.5
AL2G13840 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 7.8e-16 88.2 177 40.1
BcaC04g22367 Brassica carinata HOM05D000161 ORTHO05D000111 7.8e-16 88.2 138 50.0
BcaC06g31903 Brassica carinata HOM05D000161 ORTHO05D000111 7.8e-16 88.2 136 50.0
Carub.0002s0291 Capsella rubella HOM05D000161 ORTHO05D000111 7.8e-16 88.2 105 52.4
BcaB04g20385 Brassica carinata HOM05D000161 ORTHO05D000111 1.0e-15 87.8 144 47.2
BcaC02g10512 Brassica carinata HOM05D000161 ORTHO05D000111 1.0e-15 87.8 118 50.0
BcaC04g22407 Brassica carinata HOM05D000161 ORTHO05D000111 1.0e-15 87.8 136 50.0
C04p28060 Brassica napus HOM05D000161 ORTHO05D000111 1.0e-15 87.8 118 50.0
C09p19700 Brassica napus HOM05D000161 ORTHO05D000111 1.0e-15 87.8 136 50.0
BolC4t24350H Brassica oleracea HOM05D000161 ORTHO05D000111 1.0e-15 87.8 118 50.0
A01p30840 Brassica napus HOM05D000161 ORTHO05D000111 1.3e-15 87.4 128 50.8
BolC9t54872H Brassica oleracea HOM05D000161 ORTHO05D000111 1.7e-15 87.0 136 50.0
Carub.0006s2165 Capsella rubella HOM05D000161 ORTHO05D000111 1.7e-15 87.0 154 44.2
AT1G62490 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.3e-15 86.7 98 59.2
BraA09t37261Z Brassica rapa HOM05D000161 ORTHO05D000111 2.3e-15 86.7 136 50.7
Thhalv10019750m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.3e-15 86.7 125 49.6
Sp2g02550 Schrenkiella parvula HOM05D000161 ORTHO05D000111 3.0e-15 86.3 148 45.3
Carub.0002s0309 Capsella rubella HOM05D000161 ORTHO05D000111 3.9e-15 85.9 136 49.3
Thhalv10023472m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.9e-15 85.9 93 60.2
AT1G62150 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 5.1e-15 85.5 142 45.1
BcaC02g10522 Brassica carinata HOM05D000161 ORTHO05D000111 5.1e-15 85.5 102 53.9
A09p16530 Brassica napus HOM05D000161 ORTHO05D000111 5.1e-15 85.5 109 49.5
C04p27930 Brassica napus HOM05D000161 ORTHO05D000111 5.1e-15 85.5 102 53.9
BolC4t24337H Brassica oleracea HOM05D000161 ORTHO05D000111 5.1e-15 85.5 102 53.9
BcaC02g10507 Brassica carinata HOM05D000161 ORTHO05D000111 6.6e-15 85.1 136 45.6
C04p28130 Brassica napus HOM05D000161 ORTHO05D000111 6.6e-15 85.1 136 45.6
BolC4t24356H Brassica oleracea HOM05D000161 ORTHO05D000111 6.6e-15 85.1 136 45.6
Carub.0002s0306 Capsella rubella HOM05D000161 ORTHO05D000111 6.6e-15 85.1 138 46.4
Thhalv10024124m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 8.7e-15 84.7 131 45.8
Thhalv10024133m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 8.7e-15 84.7 125 51.2
AT1G61960 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.1e-14 84.3 129 47.3
BraA01t03211Z Brassica rapa HOM05D000161 ORTHO05D000111 1.1e-14 84.3 134 50.0
CARHR155600 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.1e-14 84.3 133 48.9
A06p34730 Brassica napus HOM05D000161 ORTHO05D000111 1.5e-14 84.0 149 42.3
AT1G62085 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.9e-14 83.6 130 45.4
BraA06t26401Z Brassica rapa HOM05D000161 ORTHO05D000111 1.9e-14 83.6 149 42.3
AL6G35250 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.5e-14 83.2 148 43.9
AL1G66000 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.3e-14 82.8 145 40.7
A03p44330 Brassica napus HOM05D000161 ORTHO05D000111 3.3e-14 82.8 135 51.1
A09p13120 Brassica napus HOM05D000161 ORTHO05D000111 3.3e-14 82.8 127 49.6
Thhalv10023461m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.3e-14 82.8 129 46.5
A01p30830 Brassica napus HOM05D000161 ORTHO05D000111 4.3e-14 82.4 133 49.6
BcaC01g03302 Brassica carinata HOM05D000161 ORTHO05D000111 5.6e-14 82.0 134 48.5
BolC3t17658H Brassica oleracea HOM05D000161 ORTHO05D000111 5.6e-14 82.0 134 48.5
BraA03t13562Z Brassica rapa HOM05D000161 ORTHO05D000111 1.3e-13 80.9 135 50.4
BraA09t36958Z Brassica rapa HOM05D000161 ORTHO05D000111 1.6e-13 80.5 127 48.8
Thhalv10023470m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.1e-13 80.1 132 48.5
AL2G14090 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.1e-12 77.8 129 46.5
Thhalv10024039m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.8e-12 77.0 139 48.2
AL2G13770 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.4e-12 76.6 105 49.5
BcaNung01835 Brassica carinata HOM05D000161 ORTHO05D000111 2.4e-12 76.6 149 40.9
C03p54760 Brassica napus HOM05D000161 ORTHO05D000111 2.4e-12 76.6 167 43.7
C07p43750 Brassica napus HOM05D000161 ORTHO05D000111 2.4e-12 76.6 149 40.9
BolC7t44904H Brassica oleracea HOM05D000161 ORTHO05D000111 2.4e-12 76.6 149 40.9
Thhalv10024167m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.4e-12 76.6 132 45.5
AL2G13900 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 5.3e-12 75.5 94 55.3
BcaC04g22763 Brassica carinata HOM05D000161 ORTHO05D000111 5.3e-12 75.5 96 54.2
C09p15560 Brassica napus HOM05D000161 ORTHO05D000111 5.3e-12 75.5 96 54.2
BolC9t54461H Brassica oleracea HOM05D000161 ORTHO05D000111 5.3e-12 75.5 96 54.2
CARHR189630 Cardamine hirsuta HOM05D000161 ORTHO05D000111 5.3e-12 75.5 149 44.3
AL2G13930 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.5e-11 73.9 133 41.4
Thhalv10023979m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.0e-11 73.6 75 60.0
A03p67460 Brassica napus HOM05D000161 ORTHO05D000111 2.6e-11 73.2 136 41.2
BraA01t02725Z Brassica rapa HOM05D000161 ORTHO05D000111 2.6e-11 73.2 136 41.2
BcaNung01197 Brassica carinata HOM05D000161 ORTHO05D000111 5.8e-11 72.0 151 41.7
BolC1t03868H Brassica oleracea HOM05D000161 ORTHO05D000111 5.8e-11 72.0 93 53.8
Thhalv10028140m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 5.8e-11 72.0 100 54.0
C01p39170 Brassica napus HOM05D000161 ORTHO05D000111 1.3e-07 60.8 123 38.2
Psat1g188120 Pisum sativum HOM05D000161 ORTHO05D000111 6.7e-07 58.5 91 40.7
Carub.0002s0294 Capsella rubella HOM05D000161 ORTHO05D000111 8.7e-07 58.2 186 29.0


User provided reference genes

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