Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p20050 Brassica napus HOM05D008464 ORTHO05D011143 8.5e-45 183.7 125 100.0
BolC9t54913H Brassica oleracea HOM05D008464 ORTHO05D011143 8.5e-45 183.7 125 100.0
BraA09t37286Z Brassica rapa HOM05D008464 ORTHO05D011143 1.9e-36 156.0 147 71.4
A09p16490 Brassica napus HOM05D008464 ORTHO05D011143 1.0e-34 150.2 147 72.8
BcaC04g22371 Brassica carinata HOM05D008464 ORTHO05D011143 3.4e-33 145.2 97 91.8
A09p16470 Brassica napus HOM05D008464 ORTHO05D011143 7.5e-25 117.5 129 60.5
BraA09t37284Z Brassica rapa HOM05D008464 ORTHO05D011143 2.9e-24 115.5 129 59.7
A09p16500 Brassica napus HOM05D008464 ORTHO05D011143 7.8e-22 107.5 142 52.1
BraA09t37288Z Brassica rapa HOM05D008464 ORTHO05D011143 7.8e-22 107.5 142 52.1
C09p20030 Brassica napus HOM05D008464 ORTHO05D011143 2.3e-21 105.9 129 56.6
BolC9t54911H Brassica oleracea HOM05D008464 ORTHO05D011143 2.3e-21 105.9 129 56.6
Sp2g02460 Schrenkiella parvula HOM05D008464 ORTHO05D011143 4.3e-20 101.7 122 54.1
BcaC04g22373 Brassica carinata HOM05D008464 ORTHO05D011143 6.2e-19 97.8 126 55.6
BcaC04g22374 Brassica carinata HOM05D008464 ORTHO05D011143 6.2e-19 97.8 126 55.6
BraA07t30447Z Brassica rapa HOM05D008464 ORTHO05D011143 3.5e-14 82.0 117 56.4
Thhalv10024101m.g Eutrema salsugineum HOM05D008464 ORTHO05D011143 3.0e-13 79.0 67 67.2
BcaC04g22376 Brassica carinata HOM05D008464 ORTHO05D011143 6.6e-13 77.8 52 82.7
BcaC08g45479 Brassica carinata HOM05D008464 ORTHO05D011143 8.6e-13 77.4 65 70.8
C06p31300 Brassica napus HOM05D008464 ORTHO05D011143 8.6e-13 77.4 65 70.8
BolC6t38268H Brassica oleracea HOM05D008464 ORTHO05D011143 8.6e-13 77.4 65 70.8
Thhalv10023864m.g Eutrema salsugineum HOM05D008464 ORTHO05D011143 2.5e-12 75.9 67 67.2
A07p28020 Brassica napus HOM05D008464 ORTHO05D011143 3.3e-12 75.5 117 59.8
Sp2g02420 Schrenkiella parvula HOM05D008464 ORTHO05D011143 1.2e-09 67.0 97 47.4
Sp2g02470 Schrenkiella parvula HOM05D008464 ORTHO05D011143 2.0e-09 66.2 122 53.3
AL2G14030 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 5.8e-09 64.7 67 59.7
AL2G14040 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 5.8e-09 64.7 67 59.7
BcaB07g31304 Brassica carinata HOM05D008464 ORTHO05D011143 5.8e-09 64.7 124 42.7
CARHR049900 Cardamine hirsuta HOM05D008464 ORTHO05D011143 1.7e-08 63.2 121 43.0
Sp2g02400 Schrenkiella parvula HOM05D008464 ORTHO05D011143 1.7e-08 63.2 97 48.5
Carub.0002s0278 Capsella rubella HOM05D008464 ORTHO05D011143 2.2e-08 62.8 99 48.5
AT1G62060 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 8.3e-08 60.8 123 39.0
AT1G62220 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 1.1e-07 60.5 67 50.7
AT1G62000 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 3.2e-07 58.9 73 50.7
AT1G62080 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 9.2e-07 57.4 73 49.3
AL3G48150 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 2.1e-06 56.2 63 52.4
Carub.0002s0281 Capsella rubella HOM05D008464 ORTHO05D014850 2.1e-06 56.2 61 59.0
Carub.0002s0279 Capsella rubella HOM05D008464 ORTHO05D014850 4.6e-06 55.1 61 57.4
BcaC04g22770 Brassica carinata HOM05D008464 ORTHO05D011143 6.0e-06 54.7 53 64.2
A09p13080 Brassica napus HOM05D008464 ORTHO05D011143 6.0e-06 54.7 53 64.2
C09p15490 Brassica napus HOM05D008464 ORTHO05D011143 6.0e-06 54.7 53 64.2
BolC9t54455H Brassica oleracea HOM05D008464 ORTHO05D011143 6.0e-06 54.7 53 64.2
BraA09t36952Z Brassica rapa HOM05D008464 ORTHO05D011143 6.0e-06 54.7 53 64.2


User provided reference genes

Program Settings