Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p19870 Brassica napus HOM05D005725 ORTHO05D007531 4.0e-97 358.2 198 100.0
BolC9t54892H Brassica oleracea HOM05D005725 ORTHO05D007531 9.9e-96 353.6 199 99.5
BcaC04g22388 Brassica carinata HOM05D005725 ORTHO05D007531 3.0e-68 262.3 134 98.5
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 2.4e-65 252.7 217 68.7
C05p52870 Brassica napus HOM05D005725 ORTHO05D007531 3.3e-59 232.3 201 72.6
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 1.0e-55 220.7 172 70.3
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 7.2e-54 214.5 175 69.7
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 7.2e-54 214.5 175 69.7
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 1.7e-39 166.8 116 77.6
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 4.2e-38 162.2 141 66.0
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 1.2e-37 160.6 148 66.2
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 3.9e-36 155.6 115 74.8
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 6.7e-36 154.8 117 76.9
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 6.7e-36 154.8 117 76.1
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 8.8e-36 154.5 118 75.4
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 1.3e-31 140.6 115 69.6
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 3.3e-27 125.9 115 63.5
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 8.2e-26 121.3 115 60.0
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 7.0e-25 118.2 115 59.1
BraA09t40805Z Brassica rapa HOM05D005725 ORTHO05D007531 9.1e-25 117.9 144 58.3
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 1.2e-24 117.5 116 57.8
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 5.9e-24 115.2 115 57.4
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 2.0e-16 90.1 114 46.5
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 2.0e-16 90.1 114 44.7
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 3.5e-16 89.4 114 43.9
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 5.9e-16 88.6 114 41.2
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 7.7e-16 88.2 114 43.0
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.0e-15 87.8 114 41.2
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 1.7e-15 87.0 114 41.2
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.2e-15 86.7 114 41.2
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 1.9e-14 83.6 114 43.9
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 2.5e-14 83.2 114 46.5
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 1.2e-13 80.9 120 41.7
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 1.6e-13 80.5 115 40.0
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 1.6e-13 80.5 114 41.2
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 1.6e-13 80.5 114 38.6
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 2.1e-13 80.1 105 47.6
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 2.7e-13 79.7 117 41.0
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 6.1e-13 78.6 115 40.9
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 1.0e-12 77.8 117 41.0
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 1.4e-12 77.4 114 40.4
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 1.4e-12 77.4 113 45.1
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 5.2e-12 75.5 115 40.0
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 8.8e-12 74.7 118 38.1
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 4.4e-11 72.4 115 41.7
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 5.7e-11 72.0 115 39.1
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 5.7e-11 72.0 119 40.3
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 1.7e-10 70.5 115 39.1
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 1.7e-10 70.5 116 39.7
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 2.8e-10 69.7 118 38.1
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 4.9e-10 68.9 119 40.3
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 8.3e-10 68.2 119 41.2
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 1.1e-09 67.8 117 37.6
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 1.4e-09 67.4 116 35.3
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 1.8e-09 67.0 133 36.1
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 1.8e-09 67.0 114 41.2
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 2.4e-09 66.6 116 35.3
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 5.4e-09 65.5 82 40.2
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 7.0e-09 65.1 113 34.5
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 7.0e-09 65.1 115 38.3
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 1.2e-08 64.3 115 34.8
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 2.0e-08 63.5 79 41.8
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 2.7e-08 63.2 118 36.4
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 2.7e-08 63.2 118 36.4
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 2.7e-08 63.2 115 34.8
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 2.7e-08 63.2 117 36.8
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 3.5e-08 62.8 117 37.6
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 3.5e-08 62.8 115 33.9
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 4.5e-08 62.4 114 38.6
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 7.7e-08 61.6 123 37.4
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 7.7e-08 61.6 116 34.5
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 1.0e-07 61.2 115 31.3
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 1.3e-07 60.8 114 39.5
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 2.3e-07 60.1 117 35.9
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 2.9e-07 59.7 123 32.5
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 6.6e-07 58.5 114 36.8
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 8.6e-07 58.2 114 35.1
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 1.1e-06 57.8 118 34.7
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 1.1e-06 57.8 116 33.6
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 1.9e-06 57.0 118 33.1
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 2.5e-06 56.6 116 35.3
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 3.3e-06 56.2 114 35.1
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 9.5e-06 54.7 115 31.3


User provided reference genes

Program Settings