Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p18260 Brassica napus HOM05D063767 ORTHO05D042623 1.8e-44 182.2 89 100.0
BolC9t54722H Brassica oleracea HOM05D000500 ORTHO05D000367 6.3e-18 94.0 45 97.8
BcaC04g22524 Brassica carinata HOM05D000500 ORTHO05D000367 2.4e-17 92.0 44 97.7
BolC6t39212H Brassica oleracea HOM05D063767 ORTHO05D042623 5.9e-16 87.4 47 87.2
BcaB07g31425 Brassica carinata HOM05D000500 ORTHO05D000367 1.0e-15 86.7 50 82.0
A09p15140 Brassica napus HOM05D000500 ORTHO05D000367 3.7e-10 68.2 48 64.6
BraA09t37156Z Brassica rapa HOM05D000500 ORTHO05D000367 3.7e-10 68.2 48 64.6
BcaB07g31606 Brassica carinata HOM05D000500 ORTHO05D000367 1.4e-09 66.2 44 70.5
C09p18340 Brassica napus HOM05D000500 ORTHO05D000367 1.4e-09 66.2 48 62.5
BolC9t54727H Brassica oleracea HOM05D000500 ORTHO05D000367 1.4e-09 66.2 48 62.5
Carub.0002s0079 Capsella rubella HOM05D000500 ORTHO05D000367 1.4e-09 66.2 43 72.1
Thhalv10001164m.g Eutrema salsugineum HOM05D000500 ORTHO05D000367 1.4e-09 66.2 48 62.5
CARHR046940 Cardamine hirsuta HOM05D000500 ORTHO05D000367 1.8e-09 65.9 44 68.2
BcaB04g20250 Brassica carinata HOM05D000500 ORTHO05D000367 4.1e-09 64.7 48 58.3
Thhalv10028062m.g Eutrema salsugineum HOM05D000500 ORTHO05D000367 4.1e-09 64.7 44 65.9
AL2G13760 Arabidopsis lyrata HOM05D000500 ORTHO05D000367 9.2e-09 63.5 43 69.8
Carub.0002s0289 Capsella rubella HOM05D000500 ORTHO05D000367 9.2e-09 63.5 48 60.4
CARHR051260 Cardamine hirsuta HOM05D000500 ORTHO05D000367 9.2e-09 63.5 43 67.4
C09p18220 Brassica napus HOM05D000500 ORTHO05D000367 1.2e-08 63.2 44 65.9
AL2G11960 Arabidopsis lyrata HOM05D000500 ORTHO05D000367 1.6e-08 62.8 48 56.2
BcaB07g31424 Brassica carinata HOM05D000500 ORTHO05D000367 1.6e-08 62.8 49 59.2
Carub.0006s3604 Capsella rubella HOM05D000500 ORTHO05D000367 1.6e-08 62.8 43 67.4
AL2G11040 Arabidopsis lyrata HOM05D000500 ORTHO05D000367 2.7e-08 62.0 44 65.9
Carub.0002s0077 Capsella rubella HOM05D000500 ORTHO05D000367 2.7e-08 62.0 43 62.8
AL2G11060 Arabidopsis lyrata HOM05D000500 ORTHO05D000367 3.5e-08 61.6 43 67.4
AT1G62170 Arabidopsis thaliana HOM05D000500 ORTHO05D000367 3.5e-08 61.6 44 61.4
Carub.0170s0001 Capsella rubella HOM05D000500 ORTHO05D000367 3.5e-08 61.6 48 58.3
AT2G14540 Arabidopsis thaliana HOM05D000500 ORTHO05D000367 4.5e-08 61.2 44 61.4
BcaB01g04153 Brassica carinata HOM05D000500 ORTHO05D000367 4.5e-08 61.2 44 63.6
Carub.0006s3603 Capsella rubella HOM05D000500 ORTHO05D000367 4.5e-08 61.2 43 65.1
AL6G43420 Arabidopsis lyrata HOM05D000500 ORTHO05D000367 5.9e-08 60.8 43 67.4
BcaC04g22525 Brassica carinata HOM05D000500 ORTHO05D000367 5.9e-08 60.8 48 56.2
A03p15980 Brassica napus HOM05D000500 ORTHO05D000367 5.9e-08 60.8 44 65.9
C09p18230 Brassica napus HOM05D000500 ORTHO05D000367 5.9e-08 60.8 43 62.8
BolC9t54719H Brassica oleracea HOM05D000500 ORTHO05D000367 5.9e-08 60.8 48 56.2
Thhalv10024058m.g Eutrema salsugineum HOM05D000500 ORTHO05D000367 5.9e-08 60.8 44 61.4
Thhalv10024078m.g Eutrema salsugineum HOM05D000500 ORTHO05D000367 5.9e-08 60.8 49 57.1
Thhalv10024089m.g Eutrema salsugineum HOM05D000500 ORTHO05D000367 5.9e-08 60.8 44 59.1
BraA01t02987Z Brassica rapa HOM05D000500 ORTHO05D000367 7.8e-08 60.5 47 57.4
BraA10t44584Z Brassica rapa HOM05D000500 ORTHO05D000367 7.8e-08 60.5 43 65.1
A01p29080 Brassica napus HOM05D000500 ORTHO05D000367 1.0e-07 60.1 48 56.2
CARHR051070 Cardamine hirsuta HOM05D000500 ORTHO05D000367 1.0e-07 60.1 43 62.8
BcaC04g19158 Brassica carinata HOM05D000500 ORTHO05D000367 1.3e-07 59.7 44 61.4
A09p15130 Brassica napus HOM05D000500 ORTHO05D000367 1.3e-07 59.7 48 54.2
C09p18250 Brassica napus HOM05D000500 ORTHO05D000367 1.3e-07 59.7 48 54.2
C09p64140 Brassica napus HOM05D000500 ORTHO05D000367 1.3e-07 59.7 44 61.4
BolC9t54720H Brassica oleracea HOM05D000500 ORTHO05D000367 1.3e-07 59.7 48 54.2
BolC9t59251H Brassica oleracea HOM05D000500 ORTHO05D000367 1.3e-07 59.7 44 61.4
Carub.0001s4169 Capsella rubella HOM05D000500 ORTHO05D000367 1.3e-07 59.7 42 66.7
Carub.0003s2854 Capsella rubella HOM05D000500 ORTHO05D000367 1.3e-07 59.7 43 62.8
BcaB07g31528 Brassica carinata HOM05D000500 ORTHO05D000367 1.7e-07 59.3 44 59.1
BcaNung06408 Brassica carinata HOM05D000500 ORTHO05D000367 1.7e-07 59.3 44 63.6
BraA03t10889Z Brassica rapa HOM05D000500 ORTHO05D000367 1.7e-07 59.3 44 63.6
BraA09t37155Z Brassica rapa HOM05D000500 ORTHO05D000367 1.7e-07 59.3 48 54.2
AL6G43560 Arabidopsis lyrata HOM05D000500 ORTHO05D000367 2.3e-07 58.9 44 63.6
BcaC09g49402 Brassica carinata HOM05D000500 ORTHO05D027449 2.3e-07 58.9 48 54.2
BcaC09g49403 Brassica carinata HOM05D000500 ORTHO05D000367 2.3e-07 58.9 48 54.2
BcaC04g22523 Brassica carinata HOM05D000500 ORTHO05D000367 2.9e-07 58.5 40 65.0
BcaNung05363 Brassica carinata HOM05D000500 ORTHO05D000367 2.9e-07 58.5 40 65.0
A06p33220 Brassica napus HOM05D000500 ORTHO05D000367 2.9e-07 58.5 44 61.4
A10p25210 Brassica napus HOM05D000500 ORTHO05D000367 2.9e-07 58.5 43 62.8
C01p37070 Brassica napus HOM05D000500 ORTHO05D000367 2.9e-07 58.5 48 54.2
C03p18800 Brassica napus HOM05D000500 ORTHO05D000367 3.9e-07 58.2 48 58.3
Carub.0002s0080 Capsella rubella HOM05D000500 ORTHO05D000367 3.9e-07 58.2 44 61.4
AL2G11070 Arabidopsis lyrata HOM05D000500 ORTHO05D000367 8.6e-07 57.0 44 59.1
AT1G64030 Arabidopsis thaliana HOM05D000500 ORTHO05D000367 1.1e-06 56.6 44 59.1
BolC9t54718H Brassica oleracea HOM05D000500 ORTHO05D000367 1.9e-06 55.8 49 55.1
Sp4g17790 Schrenkiella parvula HOM05D000500 ORTHO05D000367 2.5e-06 55.5 45 55.6
C03p59230 Brassica napus HOM05D000500 ORTHO05D000367 4.3e-06 54.7 44 59.1
AL2G11030 Arabidopsis lyrata HOM05D000500 ORTHO05D000367 5.6e-06 54.3 58 43.1
AL3G46110 Arabidopsis lyrata HOM05D000500 ORTHO05D000367 5.6e-06 54.3 43 55.8
Carub.0004s1727 Capsella rubella HOM05D000500 ORTHO05D000367 5.6e-06 54.3 43 60.5
CARHR051500 Cardamine hirsuta HOM05D000500 ORTHO05D000367 5.6e-06 54.3 41 58.5
AT2G35580 Arabidopsis thaliana HOM05D000500 ORTHO05D000367 9.5e-06 53.5 44 52.3


User provided reference genes

Program Settings