Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 0.0e+00 1163.3 650 100.0
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 0.0e+00 1153.7 650 99.2
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 0.0e+00 1150.2 650 98.9
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 0.0e+00 1096.6 658 94.2
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 0.0e+00 1091.3 658 93.9
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 1.2e-283 979.5 670 84.0
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 8.4e-261 903.7 656 83.5
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 5.1e-250 867.8 672 78.1
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 3.4e-238 828.6 677 74.6
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 5.3e-231 804.7 675 75.7
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 3.3e-225 785.4 675 73.9
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 9.7e-225 783.9 672 73.7
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 3.0e-173 612.8 559 65.5
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 5.1e-165 585.5 628 58.0
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 4.1e-82 310.1 637 38.1
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 2.3e-80 304.3 630 37.3
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 2.3e-77 294.3 637 37.7
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 4.0e-77 293.5 578 38.4
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 2.2e-75 287.7 627 36.4
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 2.4e-74 284.3 609 37.6
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 5.0e-72 276.6 472 41.3
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 1.9e-71 274.6 582 38.5
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 4.0e-69 266.9 593 35.8
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 5.8e-68 263.1 626 35.8
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 3.7e-67 260.4 479 39.7
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 1.9e-66 258.1 527 37.4
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 3.2e-66 257.3 569 35.5
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 7.0e-66 256.1 479 38.8
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 9.2e-66 255.8 592 34.8
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 5.0e-64 250.0 624 34.0
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 2.5e-63 247.7 630 35.7
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 2.8e-62 244.2 642 34.1
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 3.6e-62 243.8 628 34.9
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 5.2e-61 240.0 463 36.5
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 1.5e-60 238.4 490 34.9
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 9.8e-60 235.7 500 36.4
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.2e-59 234.6 478 37.0
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 3.7e-59 233.8 487 36.8
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 3.7e-59 233.8 530 36.4
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 3.7e-59 233.8 489 36.8
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 1.9e-58 231.5 573 35.1
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 3.2e-58 230.7 585 35.4
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 5.4e-58 229.9 463 38.0
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 1.2e-57 228.8 562 34.7
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 6.0e-57 226.5 477 37.7
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 6.0e-57 226.5 566 34.8
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 6.0e-57 226.5 426 38.3
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.0e-56 225.7 504 35.9
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.3e-56 224.6 485 35.9
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 5.1e-56 223.4 566 33.0
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.9e-55 221.5 600 33.5
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 2.5e-55 221.1 567 33.5
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 4.3e-55 220.3 533 34.3
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 5.6e-55 219.9 631 33.1
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 5.6e-55 219.9 596 34.1
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 5.6e-55 219.9 507 36.1
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 7.3e-55 219.5 629 33.2
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 7.3e-55 219.5 560 32.7
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 9.5e-55 219.2 466 35.0
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 1.2e-54 218.8 626 31.6
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 1.2e-54 218.8 626 31.6
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.6e-54 218.4 569 33.6
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 2.8e-54 217.6 630 31.3
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 4.7e-54 216.9 577 32.9
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 4.7e-54 216.9 364 41.5
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 1.4e-53 215.3 562 33.5
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.4e-53 215.3 634 32.5
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 2.3e-53 214.5 631 31.5
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 5.2e-53 213.4 508 34.6
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 1.2e-52 212.2 526 35.0
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.6e-52 211.1 511 34.2
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.4e-52 210.7 509 34.0
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 4.4e-52 210.3 477 35.6
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 2.9e-51 207.6 629 32.9
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 2.4e-50 204.5 534 31.5
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 3.2e-50 204.1 466 33.7
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 3.2e-50 204.1 414 35.7
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 2.1e-49 201.4 593 31.9
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.5e-49 200.7 511 33.9
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 1.0e-48 199.1 586 33.1
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 1.3e-48 198.7 552 32.6
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.3e-48 198.7 364 38.5
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 8.6e-48 196.1 553 33.1
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.5e-47 195.3 350 37.7
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 9.6e-47 192.6 605 31.6
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 2.1e-46 191.4 532 33.1
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 4.7e-46 190.3 484 32.9
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 4.7e-46 190.3 402 35.8
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 7.6e-44 183.0 443 33.6
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 3.8e-43 180.6 450 33.3
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 3.8e-43 180.6 520 33.7
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 4.9e-43 180.3 518 34.7
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 1.4e-42 178.7 528 31.1
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 1.9e-42 178.3 562 32.6
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 2.4e-42 177.9 551 31.0
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 9.3e-42 176.0 451 31.3
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 9.3e-42 176.0 554 31.0
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.6e-41 175.3 563 30.7
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 1.7e-40 171.8 595 31.1
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 3.0e-40 171.0 399 33.3
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 3.0e-40 171.0 506 31.4
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 5.6e-39 166.8 572 30.4
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 9.6e-39 166.0 451 32.6
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 6.2e-38 163.3 232 44.0
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 3.1e-37 161.0 415 33.3
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 4.2e-34 150.6 492 29.7
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 2.7e-33 147.9 508 30.1
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 1.0e-32 146.0 563 30.0
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 1.3e-32 145.6 510 31.2
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 2.3e-32 144.8 517 30.8
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 1.3e-30 139.0 345 34.5
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 5.3e-21 107.1 256 32.8
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 2.2e-19 101.7 441 26.8
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 2.1e-17 95.1 439 25.1
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 5.1e-16 90.5 343 27.7
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 1.4e-13 82.4 450 25.8
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 1.0e-11 76.3 219 29.7
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 3.0e-08 64.7 133 33.8


User provided reference genes

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