Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 0.0e+00 1098.6 569 100.0
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 7.3e-293 1010.0 531 98.9
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 1.9e-285 985.3 531 96.6
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 5.6e-285 983.8 531 96.4
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 1.2e-284 982.6 533 96.1
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 1.1e-283 979.5 531 95.9
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 2.4e-264 915.2 531 89.5
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 1.9e-256 889.0 534 87.8
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 5.6e-253 877.5 536 85.3
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 1.2e-250 869.8 532 86.5
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 1.7e-249 865.9 532 85.7
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 3.3e-237 825.1 536 83.6
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 2.8e-212 742.3 583 70.8
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 4.4e-189 665.2 466 73.8
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 1.7e-188 663.3 473 72.3
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 1.0e-185 654.1 489 70.3
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 1.7e-185 653.3 525 66.3
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 1.7e-185 653.3 525 66.3
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 2.1e-183 646.4 536 66.0
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 4.7e-183 645.2 476 70.4
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 4.0e-182 642.1 549 64.1
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 4.0e-182 642.1 486 68.9
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 5.2e-182 641.7 476 70.0
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 8.9e-182 641.0 480 68.3
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 8.9e-182 641.0 486 68.9
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 8.9e-182 641.0 486 68.7
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 9.8e-181 637.5 469 69.5
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 1.3e-180 637.1 492 67.3
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 2.2e-180 636.3 481 67.8
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.1e-179 634.0 520 64.8
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 1.9e-179 633.3 480 68.5
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 1.9e-179 633.3 477 68.8
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 5.4e-179 631.7 469 69.7
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 1.6e-178 630.2 478 68.0
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 2.7e-178 629.4 545 63.1
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 4.6e-178 628.6 469 69.3
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 7.8e-178 627.9 476 68.1
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 3.3e-176 622.5 474 68.8
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 1.2e-175 620.5 471 67.9
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 3.6e-175 619.0 485 66.2
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 6.2e-175 618.2 494 66.2
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 1.8e-174 616.7 493 66.7
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 3.1e-174 615.9 475 67.2
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 3.1e-174 615.9 471 68.2
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 1.2e-173 614.0 534 61.6
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 5.8e-173 611.7 484 66.1
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 3.7e-172 609.0 483 66.3
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 1.1e-171 607.4 505 64.4
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 1.1e-171 607.4 472 67.4
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 1.9e-171 606.7 483 64.8
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 2.4e-171 606.3 468 66.9
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 1.6e-170 603.6 488 65.4
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 3.5e-170 602.4 478 66.5
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 4.6e-170 602.1 515 62.9
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 8.6e-169 597.8 465 67.3
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 1.9e-168 596.7 499 64.3
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 1.9e-168 596.7 479 65.3
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 1.9e-168 596.7 481 64.4
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 2.4e-166 589.7 492 62.8
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 3.1e-166 589.3 481 64.7
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 4.0e-166 589.0 502 62.2
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 2.6e-165 586.3 467 66.2
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 3.4e-165 585.9 473 63.2
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 7.6e-165 584.7 482 63.9
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 1.7e-164 583.6 486 63.4
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 1.1e-163 580.9 487 63.9
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 1.2e-162 577.4 399 73.2
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 3.9e-161 572.4 475 64.2
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 4.4e-157 558.9 452 63.3
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 4.4e-157 558.9 509 62.5
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 4.4e-157 558.9 497 60.0
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 2.9e-156 556.2 458 64.0
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 6.4e-156 555.1 478 60.5
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 2.5e-152 543.1 443 63.2
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 1.2e-149 534.3 449 63.9
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 1.2e-149 534.3 556 55.6
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 4.5e-149 532.3 454 62.8
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 9.9e-149 531.2 442 64.7
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 8.4e-148 528.1 482 57.5
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 9.3e-147 524.6 470 60.2
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 1.6e-146 523.9 492 58.1
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 4.6e-146 522.3 489 56.9
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 2.8e-143 513.1 503 54.1
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 1.6e-138 497.3 500 56.0
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 8.2e-135 485.0 487 53.8
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 4.9e-132 475.7 483 55.7
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 6.3e-127 458.8 494 52.6
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 1.7e-124 450.7 508 52.6
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 3.0e-121 439.9 477 49.5
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 3.7e-119 433.0 508 48.4
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 1.8e-118 430.6 446 49.3
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 1.9e-115 420.6 347 60.5
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 7.4e-112 408.7 453 48.8
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 1.3e-111 407.9 290 73.1
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 2.2e-111 407.1 286 73.8
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 8.2e-103 378.6 255 78.8
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 5.7e-88 329.3 506 41.1
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 1.7e-87 327.8 199 88.9
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 8.3e-63 245.7 188 66.0
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 9.5e-59 232.3 251 51.4
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 8.1e-58 229.2 536 32.8
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.1e-51 208.8 199 53.3
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 3.3e-51 207.2 182 54.4
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 5.6e-51 206.5 247 47.4
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 9.2e-46 189.1 204 48.0
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 5.1e-36 156.8 128 66.4
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 1.9e-35 154.8 182 52.2
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 4.8e-34 150.2 153 54.9
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.5e-16 92.0 98 53.1
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 3.8e-15 87.4 74 68.9
BcaC09g50327 Brassica carinata HOM05D017681 ORTHO05D019883 3.3e-11 74.3 117 42.7
BcaC04g20679 Brassica carinata HOM05D017681 ORTHO05D019883 2.2e-10 71.6 117 41.0


User provided reference genes

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