Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p17590 Brassica napus HOM05D001498 ORTHO05D013033 8.8e-30 132.9 64 100.0
BolC1t04860H Brassica oleracea HOM05D001498 ORTHO05D013033 7.5e-29 129.8 64 98.4
A08p07520 Brassica napus HOM05D001498 ORTHO05D013033 2.8e-28 127.9 64 96.9
BolC6t37504H Brassica oleracea HOM05D001498 ORTHO05D013033 8.3e-28 126.3 64 96.9
C09p27450 Brassica napus HOM05D001498 ORTHO05D013033 2.4e-27 124.8 64 95.3
BcaC01g06537 Brassica carinata HOM05D001498 ORTHO05D011448 9.5e-24 112.8 55 98.2
BcaC02g10288 Brassica carinata HOM05D001498 ORTHO05D011448 9.5e-24 112.8 55 98.2
C03p66020 Brassica napus HOM05D001498 ORTHO05D011448 9.5e-24 112.8 55 98.2
C03p80470 Brassica napus HOM05D001498 ORTHO05D011448 9.5e-24 112.8 55 98.2
C04p36720 Brassica napus HOM05D001498 ORTHO05D011448 9.5e-24 112.8 55 98.2
C05p34950 Brassica napus HOM05D001498 ORTHO05D011448 9.5e-24 112.8 55 98.2
C06p18080 Brassica napus HOM05D001498 ORTHO05D011878 9.5e-24 112.8 55 98.2
BolC3t13783H Brassica oleracea HOM05D001498 ORTHO05D011448 9.5e-24 112.8 55 98.2
BolC3t18712H Brassica oleracea HOM05D001498 ORTHO05D011448 9.5e-24 112.8 55 98.2
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 9.5e-24 112.8 55 98.2
BolC9t54650H Brassica oleracea HOM05D001498 ORTHO05D013033 9.5e-24 112.8 55 98.2
C09p16600 Brassica napus HOM05D001498 ORTHO05D011448 2.1e-23 111.7 55 96.4
A08p08110 Brassica napus HOM05D001498 ORTHO05D011448 2.8e-23 111.3 55 96.4
C04p41870 Brassica napus HOM05D001498 ORTHO05D011448 2.8e-23 111.3 55 96.4
C08p08890 Brassica napus HOM05D001498 ORTHO05D011448 2.8e-23 111.3 55 96.4
BolC6t36734H Brassica oleracea HOM05D001498 ORTHO05D011448 2.8e-23 111.3 55 96.4
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 4.7e-23 110.5 55 96.4
C09p19430 Brassica napus HOM05D001498 ORTHO05D013028 4.7e-23 110.5 55 96.4
BolC6t38704H Brassica oleracea HOM05D001498 ORTHO05D011448 4.7e-23 110.5 54 98.1
C03p66360 Brassica napus HOM05D001498 ORTHO05D013028 6.1e-23 110.2 55 94.5
BolC3t18909H Brassica oleracea HOM05D001498 ORTHO05D011448 6.1e-23 110.2 55 94.5
BolC3t19486H Brassica oleracea HOM05D001498 ORTHO05D013033 6.1e-23 110.2 55 94.5
C03p75890 Brassica napus HOM05D001498 ORTHO05D011448 1.4e-22 109.0 55 94.5
C02p52010 Brassica napus HOM05D001498 ORTHO05D013028 2.3e-22 108.2 55 96.4
C08p06700 Brassica napus HOM05D001498 ORTHO05D011448 2.3e-22 108.2 55 94.5
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 4.0e-22 107.5 55 94.5
A10p06620 Brassica napus HOM05D001498 ORTHO05D011448 4.0e-22 107.5 54 96.3
BraA07t28351Z Brassica rapa HOM05D001498 ORTHO05D011448 4.0e-22 107.5 54 96.3
BcaB04g18488 Brassica carinata HOM05D001498 ORTHO05D011448 5.2e-22 107.1 55 90.9
C01p30540 Brassica napus HOM05D001498 ORTHO05D011263 5.2e-22 107.1 54 94.4
C07p30740 Brassica napus HOM05D001498 ORTHO05D011448 5.2e-22 107.1 55 94.5
C09p28440 Brassica napus HOM05D001498 ORTHO05D013033 5.2e-22 107.1 55 94.5
A08p06040 Brassica napus HOM05D001498 ORTHO05D013028 1.5e-21 105.5 55 90.9
A05p28410 Brassica napus HOM05D001498 ORTHO05D011448 2.0e-21 105.1 54 94.4
C07p01260 Brassica napus HOM05D001498 ORTHO05D011448 2.0e-21 105.1 55 94.5
C08p17900 Brassica napus HOM05D001498 ORTHO05D011448 2.0e-21 105.1 55 92.7
BolC8t49420H Brassica oleracea HOM05D001498 ORTHO05D011448 2.0e-21 105.1 55 92.7
BcaC07g38655 Brassica carinata HOM05D001498 ORTHO05D011448 3.4e-21 104.4 55 90.9
BraA08t32604Z Brassica rapa HOM05D001498 ORTHO05D011263 4.4e-21 104.0 55 90.9
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 1.7e-20 102.1 54 90.7
A10p06870 Brassica napus HOM05D001498 ORTHO05D013033 5.4e-19 97.1 67 77.6
BolC9t57314H Brassica oleracea HOM05D001498 ORTHO05D011506 2.0e-18 95.1 55 83.6
C06p23310 Brassica napus HOM05D001498 ORTHO05D013033 3.9e-17 90.9 45 95.6
C04p21390 Brassica napus HOM05D001498 ORTHO05D013033 5.0e-17 90.5 44 97.7
A09p33380 Brassica napus HOM05D001498 ORTHO05D013033 1.1e-16 89.4 61 77.0
BraA09t38880Z Brassica rapa HOM05D001498 ORTHO05D013033 1.1e-16 89.4 61 77.0
BraA09t40145Z Brassica rapa HOM05D001498 ORTHO05D013033 1.2e-15 85.9 43 95.3
BolC2t11285H Brassica oleracea HOM05D001498 ORTHO05D106766 8.0e-15 83.2 48 89.6
C06p31040 Brassica napus HOM05D001498 ORTHO05D013033 1.8e-14 82.0 40 95.0
C09p21190 Brassica napus HOM05D001498 ORTHO05D011448 4.0e-14 80.9 40 100.0
C03p56240 Brassica napus HOM05D001498 ORTHO05D011448 1.2e-13 79.3 40 97.5
BolC7t45419H Brassica oleracea HOM05D001498 ORTHO05D011878 2.6e-13 78.2 40 95.0
A07p02030 Brassica napus HOM05D001498 ORTHO05D011448 4.9e-12 73.9 40 95.0
BcaC09g49625 Brassica carinata HOM05D001498 ORTHO05D031765 1.1e-11 72.8 53 60.4
C01p34360 Brassica napus HOM05D001498 ORTHO05D031765 1.1e-11 72.8 53 60.4
BolC1t03406H Brassica oleracea HOM05D001498 ORTHO05D031765 1.1e-11 72.8 53 60.4
C04p35200 Brassica napus HOM05D007818 ORTHO05D015522 1.4e-11 72.4 54 59.3
C07p11030 Brassica napus HOM05D007818 ORTHO05D011878 3.2e-11 71.2 54 55.6
A07p05920 Brassica napus HOM05D007818 ORTHO05D015522 4.1e-11 70.9 57 54.4
C05p44350 Brassica napus HOM05D007818 ORTHO05D000013 4.1e-11 70.9 54 57.4
C07p06900 Brassica napus HOM05D007818 ORTHO05D000013 4.1e-11 70.9 54 57.4
BraA01t01576Z Brassica rapa HOM05D007818 ORTHO05D015522 5.4e-11 70.5 54 55.6
BraA03t15276Z Brassica rapa HOM05D007818 ORTHO05D011878 5.4e-11 70.5 54 55.6
BraSC37t46122Z Brassica rapa HOM05D007818 ORTHO05D011878 7.0e-11 70.1 54 55.6
C01p45320 Brassica napus HOM05D007818 ORTHO05D011878 9.2e-11 69.7 54 55.6
C05p36060 Brassica napus HOM05D007818 ORTHO05D015522 9.2e-11 69.7 54 55.6
BolC6t36793H Brassica oleracea HOM05D007818 ORTHO05D011878 9.2e-11 69.7 54 55.6
BraA01t02469Z Brassica rapa HOM05D007818 ORTHO05D015522 9.2e-11 69.7 54 55.6
BcaC09g49197 Brassica carinata HOM05D007818 ORTHO05D011878 1.2e-10 69.3 54 55.6
A01p25450 Brassica napus HOM05D007818 ORTHO05D015522 1.2e-10 69.3 54 55.6
C01p41510 Brassica napus HOM05D007818 ORTHO05D015522 1.2e-10 69.3 54 55.6
C02p15660 Brassica napus HOM05D007818 ORTHO05D011878 1.2e-10 69.3 54 55.6
C04p55370 Brassica napus HOM05D007818 ORTHO05D000013 1.2e-10 69.3 54 55.6
C05p45440 Brassica napus HOM05D007818 ORTHO05D000013 1.2e-10 69.3 54 55.6
C07p00660 Brassica napus HOM05D007818 ORTHO05D000013 1.2e-10 69.3 54 55.6
C07p11950 Brassica napus HOM05D007818 ORTHO05D015522 1.2e-10 69.3 54 55.6
BolC5t32989H Brassica oleracea HOM05D007818 ORTHO05D011878 1.2e-10 69.3 54 55.6
BolC9t59179H Brassica oleracea HOM05D007818 ORTHO05D011878 1.2e-10 69.3 54 55.6
BcaC01g03920 Brassica carinata HOM05D001498 ORTHO05D091853 1.6e-10 68.9 40 82.5
C01p48070 Brassica napus HOM05D007818 ORTHO05D000013 1.6e-10 68.9 54 55.6
BraA06t25340Z Brassica rapa HOM05D007818 ORTHO05D015522 3.5e-10 67.8 54 51.9
BolC7t41573H Brassica oleracea HOM05D007818 ORTHO05D015522 4.6e-10 67.4 54 53.7
BcaC06g33590 Brassica carinata HOM05D001498 ORTHO05D093683 6.0e-10 67.0 38 81.6
BolC6t35450H Brassica oleracea HOM05D007818 ORTHO05D015522 7.8e-10 66.6 54 53.7
BolC6t36717H Brassica oleracea HOM05D007818 ORTHO05D011878 7.8e-10 66.6 54 53.7
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-09 65.9 52 67.3
A10p08820 Brassica napus HOM05D007818 ORTHO05D011878 1.7e-09 65.5 54 51.9
BcaC06g36234 Brassica carinata HOM05D007818 ORTHO05D018576 5.0e-09 63.9 54 51.9
C07p08980 Brassica napus HOM05D007818 ORTHO05D011878 5.0e-09 63.9 52 53.8
BolC4t23619H Brassica oleracea HOM05D007818 ORTHO05D018576 5.0e-09 63.9 54 53.7
BcaB07g33901 Brassica carinata HOM05D007818 ORTHO05D011878 8.6e-09 63.2 54 51.9
BolC3t19390H Brassica oleracea HOM05D007818 ORTHO05D018576 8.6e-09 63.2 54 53.7
BraA09t37757Z Brassica rapa HOM05D007818 ORTHO05D015532 8.6e-09 63.2 53 54.7
BolC4t22585H Brassica oleracea HOM05D007818 ORTHO05D018576 2.1e-07 58.5 54 50.0
C04p56130 Brassica napus HOM05D001498 ORTHO05D096434 2.8e-07 58.2 49 69.4
BcaC07g38852 Brassica carinata HOM05D001498 ORTHO05D092219 1.4e-06 55.8 39 69.2
BcaC08g42821 Brassica carinata HOM05D007818 ORTHO05D018576 4.0e-06 54.3 54 48.1
BcaC01g01870 Brassica carinata HOM05D007818 ORTHO05D018576 6.8e-06 53.5 47 51.1


User provided reference genes

Program Settings