Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p17200 Brassica napus HOM05D006501 ORTHO05D008241 1.2e-124 449.9 239 100.0
BolC9t54619H Brassica oleracea HOM05D006501 ORTHO05D008241 4.3e-122 441.4 245 97.1
A09p14290 Brassica napus HOM05D006501 ORTHO05D008241 3.1e-120 435.3 239 97.1
BraA09t37076Z Brassica rapa HOM05D006501 ORTHO05D008241 1.5e-111 406.4 225 92.4
BcaB07g31511 Brassica carinata HOM05D006501 ORTHO05D008241 3.7e-89 332.0 192 89.1
BcaC04g22628 Brassica carinata HOM05D006501 ORTHO05D008241 1.2e-87 327.0 192 95.3
BcaB07g31509 Brassica carinata HOM05D006501 ORTHO05D008241 4.7e-76 288.5 174 87.4
AL2G10510 Arabidopsis lyrata HOM05D006501 ORTHO05D008241 2.2e-73 279.6 178 82.6
Sp2g00400 Schrenkiella parvula HOM05D006501 ORTHO05D008241 2.2e-73 279.6 181 82.9
AT1G64355 Arabidopsis thaliana HOM05D006501 ORTHO05D008241 3.7e-73 278.9 180 81.7
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 1.7e-70 270.0 181 79.0
Thhalv10023703m.g Eutrema salsugineum HOM05D006501 ORTHO05D008241 1.9e-56 223.4 141 82.3
Carub.0002s0043 Capsella rubella HOM05D006501 ORTHO05D008241 1.6e-52 210.3 141 77.3
THA.LOC104809338 Tarenaya hassleriana HOM05D006501 ORTHO05D008241 1.6e-52 210.3 175 68.6
CARHR046590 Cardamine hirsuta HOM05D006501 ORTHO05D008241 4.0e-51 205.7 141 77.3
FAN08G0187 Fragaria x ananassa HOM05D006501 ORTHO05D008241 1.1e-48 197.6 184 58.7
FAN13G2672 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.2e-48 196.1 184 58.7
Potri.003G138500 Populus trichocarpa HOM05D006501 ORTHO05D008241 3.2e-48 196.1 178 63.5
FAN04G2094 Fragaria x ananassa HOM05D006501 ORTHO05D008241 4.1e-48 195.7 184 58.7
FAN18G4356 Fragaria x ananassa HOM05D006501 ORTHO05D008241 7.1e-48 194.9 148 68.9
COL.COLO4_10671 Corchorus olitorius HOM05D006501 ORTHO05D008241 9.2e-48 194.5 150 71.3
MBI07_g24349_MAGBIO Magnolia biondii HOM05D006501 ORTHO05D008241 1.6e-47 193.7 153 66.7
SalBow1G7260 Salvia bowleyana HOM05D006501 ORTHO05D008241 2.1e-47 193.4 121 78.5
SalBow1G8172 Salvia bowleyana HOM05D006501 ORTHO05D008241 2.1e-47 193.4 121 78.5
CAN.G792.46 Capsicum annuum HOM05D006501 ORTHO05D008241 2.7e-47 193.0 168 63.1
FAN18G2585 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.5e-47 192.6 148 68.2
TWI60G0228 Tripterygium wilfordii HOM05D006501 ORTHO05D008241 4.6e-47 192.2 125 81.6
vmacro13905 Vaccinium macrocarpon HOM05D006501 ORTHO05D008241 7.8e-47 191.4 152 69.1
Duzib205G0456 Durio zibethinus HOM05D006501 ORTHO05D008241 1.0e-46 191.0 164 65.2
PGSC0003DMG400005788 Solanum tuberosum HOM05D006501 ORTHO05D008241 1.0e-46 191.0 168 63.7
CiPaw.11G123100 Carya illinoinensis HOM05D006501 ORTHO05D008241 1.3e-46 190.7 155 67.7
Haze_08636 Corylus avellana HOM05D006501 ORTHO05D008241 1.3e-46 190.7 175 59.4
Sopen08g004120 Solanum pennellii HOM05D006501 ORTHO05D008241 1.7e-46 190.3 168 63.1
TAR374G0759 Trochodendron aralioides HOM05D006501 ORTHO05D008241 2.3e-46 189.9 103 90.3
Nitab4.5_0002944g0130 Nicotiana tabacum HOM05D006501 ORTHO05D008241 3.0e-46 189.5 121 77.7
Solyc08g008270.4 Solanum lycopersicum HOM05D006501 ORTHO05D008241 3.0e-46 189.5 150 68.7
Dinv37544 Davidia involucrata HOM05D006501 ORTHO05D008241 3.9e-46 189.1 156 65.4
Lsat_1_v5_gn_6_12120 Lactuca sativa HOM05D006501 ORTHO05D008241 5.1e-46 188.7 129 74.4
CSS0007891 Camellia sinensis var. sinensis HOM05D006501 ORTHO05D008241 6.6e-46 188.3 153 69.3
RcHm_v2.0_Chr7g0195201 Rosa chinensis HOM05D006501 ORTHO05D008241 6.6e-46 188.3 182 59.3
TAR374G1465 Trochodendron aralioides HOM05D006501 ORTHO05D008241 6.6e-46 188.3 103 89.3
Actinidia27329 Actinidia chinensis HOM05D006501 ORTHO05D008241 8.7e-46 188.0 116 81.0
GSVIVG01019510001 Vitis vinifera HOM05D006501 ORTHO05D003403 8.7e-46 188.0 153 69.9
Cpa.g.sc79.61 Carica papaya HOM05D006501 ORTHO05D008241 1.1e-45 187.6 129 75.2
Thecc.03G294700 Theobroma cacao HOM05D006501 ORTHO05D008241 1.9e-45 186.8 176 61.9
Manes.02G011600 Manihot esculenta HOM05D006501 ORTHO05D008241 3.3e-45 186.0 130 76.2
Sabra03G0099700 Salix brachista HOM05D006501 ORTHO05D003403 3.3e-45 186.0 166 63.9
Prupe.5G116900 Prunus persica HOM05D006501 ORTHO05D008241 4.3e-45 185.7 177 59.3
Rhsim07G0083200 Rhododendron simsii HOM05D006501 ORTHO05D008241 4.3e-45 185.7 135 74.1
ClCG01G001980 Citrullus lanatus HOM05D006501 ORTHO05D008241 5.6e-45 185.3 169 62.1
Sed0001613 Sechium edule HOM05D006501 ORTHO05D008241 9.6e-45 184.5 166 65.1
Glyma.05G215800 Glycine max HOM05D006501 ORTHO05D008241 1.2e-44 184.1 127 78.0
MD14G1122900 Malus domestica HOM05D006501 ORTHO05D008241 1.2e-44 184.1 178 61.2
Nn3g19061 Nelumbo nucifera HOM05D006501 ORTHO05D008241 1.2e-44 184.1 109 85.3
CANSAT21G0520 Cannabis sativa HOM05D006501 ORTHO05D008241 1.6e-44 183.7 110 82.7
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 1.6e-44 183.7 127 76.4
MELO3C005743.2 Cucumis melo HOM05D006501 ORTHO05D008241 2.8e-44 183.0 123 78.0
Actinidia22724 Actinidia chinensis HOM05D006501 ORTHO05D008241 3.6e-44 182.6 130 73.8
Gohir.A08G100000 Gossypium hirsutum HOM05D006501 ORTHO05D008241 3.6e-44 182.6 110 84.5
Gorai.004G134700 Gossypium raimondii HOM05D006501 ORTHO05D008241 3.6e-44 182.6 110 84.5
Peaxi162Scf00102g01748 Petunia axillaris HOM05D006501 ORTHO05D008241 4.7e-44 182.2 138 69.6
SGA_v2.0_scaffold305G47943 Striga asiatica HOM05D006501 ORTHO05D008241 4.7e-44 182.2 146 67.8
arahy.Tifrunner.gnm1.ann1.68SH35 Arachis hypogaea HOM05D006501 ORTHO05D008241 6.2e-44 181.8 103 86.4
arahy.Tifrunner.gnm1.ann1.MC0I99 Arachis hypogaea HOM05D006501 ORTHO05D008241 6.2e-44 181.8 103 86.4
CsaV3_5G002110 Cucumis sativus L. HOM05D006501 ORTHO05D008241 8.1e-44 181.4 164 62.2
Oeu009949.1 Olea europaea HOM05D006501 ORTHO05D008241 8.1e-44 181.4 158 63.3
MSTRG.25662 Avicennia marina HOM05D006501 ORTHO05D008241 1.1e-43 181.0 140 70.0
Gohir.D08G131800 Gossypium hirsutum HOM05D006501 ORTHO05D008241 1.1e-43 181.0 110 83.6
Nitab4.5_0006656g0030 Nicotiana tabacum HOM05D006501 ORTHO05D008241 1.1e-43 181.0 127 73.2
PSO384G3305 Papaver somniferum HOM05D006501 ORTHO05D008241 1.1e-43 181.0 153 65.4
Atru.chr4.2141 Acer truncatum HOM05D006501 ORTHO05D008241 1.4e-43 180.6 161 63.4
Phvul.002G297000 Phaseolus vulgaris HOM05D006501 ORTHO05D008241 1.4e-43 180.6 157 66.9
Hund11400 Selenicereus undatus HOM05D006501 ORTHO05D008241 1.4e-43 180.6 109 81.7
VMungo0251G3563 Vigna mungo HOM05D006501 ORTHO05D008241 1.4e-43 180.6 135 71.9
COL.COLO4_10669 Corchorus olitorius HOM05D006501 ORTHO05D008241 1.8e-43 180.3 171 62.0
Ca_17489_v3 Cicer arietinum L. HOM05D006501 ORTHO05D008241 2.4e-43 179.9 164 62.2
Aqoxy7G00141 Aquilegia oxysepala HOM05D006501 ORTHO05D008241 4.0e-43 179.1 124 75.0
Migut.A00672 Erythranthe guttata HOM05D006501 ORTHO05D008241 4.0e-43 179.1 124 76.6
Cfa022928 Carpinus fangiana HOM05D006501 ORTHO05D008241 5.2e-43 178.7 133 69.9
HPP92_004586 Vanilla planifolia HOM05D006501 ORTHO05D000003 5.2e-43 178.7 123 74.8
Cc08_g15900 Coffea canephora HOM05D006501 ORTHO05D008241 6.9e-43 178.3 177 56.5
Medtr8g099345 Medicago truncatula HOM05D006501 ORTHO05D008241 9.0e-43 177.9 151 63.6
unitig_46.g18618 Utricularia gibba HOM05D006501 ORTHO05D008241 9.0e-43 177.9 107 81.3
Zm00001eb296420 Zea mays HOM05D006501 ORTHO05D008241 1.2e-42 177.6 124 73.4
HanXRQChr09g0256331 Helianthus annuus HOM05D006501 ORTHO05D008241 2.6e-42 176.4 104 85.6
Lj4g0012209 Lotus japonicus HOM05D006501 ORTHO05D008241 2.6e-42 176.4 127 76.4
DCAR_005033 Daucus carota HOM05D006501 ORTHO05D008241 5.8e-42 175.3 177 57.6
MD06G1104000 Malus domestica HOM05D006501 ORTHO05D008241 7.6e-42 174.9 178 58.4
PSO135G1023 Papaver somniferum HOM05D006501 ORTHO05D008241 7.6e-42 174.9 135 68.9
Duzib068G1433 Durio zibethinus HOM05D006501 ORTHO05D008241 2.2e-41 173.3 198 53.0
PGR042G3674 Punica granatum HOM05D006501 ORTHO05D008241 2.2e-41 173.3 107 80.4
Ciclev10022489m.g Citrus clementina HOM05D006501 ORTHO05D008241 2.9e-41 172.9 140 66.4
Lalb_Chr05g0224191 Lupinus albus HOM05D006501 ORTHO05D008241 2.9e-41 172.9 158 63.3
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 4.9e-41 172.2 107 80.4
Eucgr.E00849 Eucalyptus grandis HOM05D006501 ORTHO05D008241 8.4e-41 171.4 131 71.0
Psat7g027120 Pisum sativum HOM05D006501 ORTHO05D008241 8.4e-41 171.4 103 84.5
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis HOM05D006501 ORTHO05D008241 5.4e-40 168.7 108 76.9
SEGI_07201 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 5.4e-40 168.7 105 79.0
Sc01g0010190 Simmondsia chinensis HOM05D006501 ORTHO05D008241 7.1e-40 168.3 168 60.1
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 7.8e-39 164.9 106 77.4
Pp3c8_24130 Physcomitrium patens HOM05D006501 ORTHO05D008241 1.0e-38 164.5 102 81.4
BcaC04g22630 Brassica carinata HOM05D006501 ORTHO05D008241 1.7e-38 163.7 83 97.6
Sed0024637 Sechium edule HOM05D006501 ORTHO05D008241 3.9e-38 162.5 168 57.7
Mapoly0049s0020 Marchantia polymorpha HOM05D006501 ORTHO05D008241 1.9e-37 160.2 109 75.2
Atru.chr9.2018 Acer truncatum HOM05D006501 ORTHO05D008241 5.6e-37 158.7 192 51.0
Migut.E01245 Erythranthe guttata HOM05D006501 ORTHO05D008241 7.6e-34 148.3 144 56.9
SalBow8G4809 Salvia bowleyana HOM05D006501 ORTHO05D008241 1.1e-32 144.4 180 50.6
Hma1.2p1_0952F.1_g241020 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 1.9e-32 143.7 121 66.9
Cre08.g376450 Chlamydomonas reinhardtii HOM05D006501 ORTHO05D008241 1.6e-31 140.6 108 65.7
Potri.001G093001 Populus trichocarpa HOM05D006501 ORTHO05D008241 9.6e-29 131.3 74 86.5
Zm00001eb150250 Zea mays HOM05D006501 ORTHO05D008241 9.6e-29 131.3 101 72.3
FvH4_5g04360 Fragaria vesca HOM05D006501 ORTHO05D008241 1.5e-26 124.0 87 74.7
QL02p031049 Quercus lobata HOM05D006501 ORTHO05D008241 2.9e-25 119.8 129 55.0
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 1.1e-24 117.9 112 59.8
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 3.2e-24 116.3 109 60.6
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 5.5e-24 115.5 127 55.1
Ah.12g052370 Amaranthus hybridus HOM05D006501 ORTHO05D008241 3.5e-23 112.8 65 80.0
SGA_v2.0_scaffold144G35857 Striga asiatica HOM05D006501 ORTHO05D008241 8.7e-22 108.2 109 56.9
SEGI_03665 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 9.6e-21 104.8 69 73.9
CBR_g30621 Chara braunii HOM05D006501 ORTHO05D008241 3.1e-19 99.8 77 67.5
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 3.0e-14 83.2 97 51.5
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 3.0e-14 83.2 111 47.7
Lj2C170T10 Lonicera japonica HOM05D006501 ORTHO05D008241 5.1e-14 82.4 44 88.6
ECA233G1307 Erigeron canadensis HOM05D006501 ORTHO05D008241 6.7e-14 82.0 46 84.8
Ah.12g052380 Amaranthus hybridus HOM05D006501 ORTHO05D008241 9.7e-13 78.2 48 75.0
Atru.chr9.2021 Acer truncatum HOM05D006501 ORTHO05D008241 1.3e-12 77.8 128 43.8
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 6.9e-11 72.0 98 43.9
RcHm_v2.0_Chr6g0301591 Rosa chinensis HOM05D001075 ORTHO05D008241 7.7e-10 68.6 61 62.3
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 2.9e-09 66.6 113 38.1


User provided reference genes

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