Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p16550 Brassica napus HOM05D002776 ORTHO05D003044 1.6e-70 269.2 130 100.0
C05p44740 Brassica napus HOM05D002776 ORTHO05D003044 4.1e-66 254.6 128 94.5
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 9.1e-66 253.4 128 96.9
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 9.8e-60 233.4 131 89.3
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 1.7e-59 232.6 114 97.4
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 5.4e-58 227.6 114 95.6
C07p01230 Brassica napus HOM05D002776 ORTHO05D003044 1.0e-56 223.4 114 93.0
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 2.3e-56 222.2 128 84.4
BraA03t15647Z Brassica rapa HOM05D002776 ORTHO05D003044 2.3e-56 222.2 128 84.4
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 3.8e-56 221.5 128 85.2
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 1.9e-55 219.2 115 91.3
BcaB07g33314 Brassica carinata HOM05D002776 ORTHO05D003044 2.8e-54 215.3 121 84.3
A03p54420 Brassica napus HOM05D002776 ORTHO05D003044 6.1e-54 214.2 115 87.8
A09p33400 Brassica napus HOM05D002776 ORTHO05D003044 6.1e-54 214.2 128 82.0
BraA09t38883Z Brassica rapa HOM05D002776 ORTHO05D003044 6.1e-54 214.2 128 82.0
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 2.3e-53 212.2 130 79.2
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 4.0e-53 211.5 114 87.7
A08p09940 Brassica napus HOM05D002776 ORTHO05D003044 6.8e-53 210.7 128 81.2
BcaB04g17677 Brassica carinata HOM05D002776 ORTHO05D003044 9.8e-52 206.8 114 86.0
BraA08t32988Z Brassica rapa HOM05D002776 ORTHO05D003044 4.7e-46 188.0 99 89.9
BolC4t25127H Brassica oleracea HOM05D002776 ORTHO05D003044 7.8e-41 170.6 128 69.5
BraA07t28346Z Brassica rapa HOM05D002776 ORTHO05D000395 1.9e-39 166.0 87 95.4
BolC2t11289H Brassica oleracea HOM05D002776 ORTHO05D003044 3.6e-38 161.8 87 87.4
C03p66380 Brassica napus HOM05D002776 ORTHO05D003044 4.7e-38 161.4 87 87.4
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 8.0e-38 160.6 87 86.2
C02p52030 Brassica napus HOM05D002776 ORTHO05D003044 1.1e-37 160.2 79 93.7
C01p38700 Brassica napus HOM05D002776 ORTHO05D003044 1.4e-37 159.8 79 93.7
C03p44580 Brassica napus HOM05D002776 ORTHO05D003044 3.1e-37 158.7 87 86.2
BcaB04g18312 Brassica carinata HOM05D002776 ORTHO05D003044 4.4e-36 154.8 127 62.2
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 1.3e-35 153.3 92 84.8
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 1.7e-35 152.9 87 82.8
BolC3t18911H Brassica oleracea HOM05D002776 ORTHO05D003044 1.7e-35 152.9 90 86.7
A01p20500 Brassica napus HOM05D002776 ORTHO05D003044 2.9e-35 152.1 78 94.9
A01p28530 Brassica napus HOM05D002776 ORTHO05D003044 1.4e-34 149.8 84 84.5
BraA01t01978Z Brassica rapa HOM05D002776 ORTHO05D003044 3.2e-34 148.7 93 83.9
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 7.8e-33 144.1 114 65.8
C08p06670 Brassica napus HOM05D002776 ORTHO05D003044 5.1e-32 141.4 114 64.0
A08p08130 Brassica napus HOM05D002776 ORTHO05D003044 1.5e-31 139.8 71 95.8
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 3.3e-31 138.7 130 57.7
BolC9t55017H Brassica oleracea HOM05D002776 ORTHO05D003044 3.3e-31 138.7 128 58.6
A07p02050 Brassica napus HOM05D002776 ORTHO05D003044 9.5e-31 137.1 113 62.8
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 9.5e-31 137.1 114 63.2
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 1.1e-29 133.7 114 62.3
A01p26310 Brassica napus HOM05D002776 ORTHO05D011320 4.0e-29 131.7 115 60.0
C03p75860 Brassica napus HOM05D002776 ORTHO05D003044 1.5e-28 129.8 110 62.7
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 9.9e-28 127.1 114 59.6
BolC6t36241H Brassica oleracea HOM05D002776 ORTHO05D003044 6.4e-27 124.4 152 48.7
C01p44940 Brassica napus HOM05D002776 ORTHO05D003044 4.6e-25 118.2 107 61.7
C04p36700 Brassica napus HOM05D002776 ORTHO05D011320 4.7e-22 108.2 56 89.3
BcaC01g02374 Brassica carinata HOM05D002776 ORTHO05D003044 1.4e-21 106.7 81 67.9
BcaB01g01444 Brassica carinata HOM05D002776 ORTHO05D003044 1.3e-19 100.1 68 69.1
BcaB02g11276 Brassica carinata HOM05D002776 ORTHO05D092224 1.3e-19 100.1 86 55.8
BcaC01g02507 Brassica carinata HOM05D002776 ORTHO05D003044 7.8e-17 90.9 83 63.9
BcaC09g51818 Brassica carinata HOM05D002776 ORTHO05D003044 1.5e-15 86.7 73 64.4
BolC3t19482H Brassica oleracea HOM05D002776 ORTHO05D106029 3.3e-15 85.5 42 97.6
C01p45390 Brassica napus HOM05D001224 ORTHO05D003044 5.6e-15 84.7 113 40.7
C05p42050 Brassica napus HOM05D001224 ORTHO05D003044 5.6e-15 84.7 113 40.7
BolC6t37488H Brassica oleracea HOM05D002776 ORTHO05D104934 7.3e-15 84.3 80 61.2
BcaB06g27856 Brassica carinata HOM05D002776 ORTHO05D003044 2.1e-14 82.8 114 43.9
BcaB05g25286 Brassica carinata HOM05D002776 ORTHO05D003044 8.1e-14 80.9 45 88.9
BolC5t31444H Brassica oleracea HOM05D001224 ORTHO05D003044 2.4e-13 79.3 129 36.4
C06p26600 Brassica napus HOM05D001224 ORTHO05D014478 2.0e-12 76.3 113 38.9
BcaB01g01631 Brassica carinata HOM05D002776 ORTHO05D003044 2.9e-11 72.4 49 75.5
BcaC03g17530 Brassica carinata HOM05D000675 ORTHO05D003044 7.1e-10 67.8 107 36.4
C02p54980 Brassica napus HOM05D000675 ORTHO05D003044 1.6e-09 66.6 105 36.2
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 1.6e-09 66.6 111 36.9
C05p45380 Brassica napus HOM05D001224 ORTHO05D003044 2.1e-09 66.2 119 35.3
BraA01t02215Z Brassica rapa HOM05D000675 ORTHO05D003044 2.1e-09 66.2 104 35.6
A07p05880 Brassica napus HOM05D001224 ORTHO05D003044 3.5e-09 65.5 124 33.1
BcaB02g10769 Brassica carinata HOM05D002776 ORTHO05D012331 6.0e-09 64.7 113 36.3
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 7.8e-09 64.3 92 43.5
BolC4t23615H Brassica oleracea HOM05D001224 ORTHO05D003044 2.3e-08 62.8 80 41.2
C04p15790 Brassica napus HOM05D000675 ORTHO05D013785 3.0e-08 62.4 107 34.6
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 3.9e-08 62.0 104 33.7
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 3.9e-08 62.0 103 32.0
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 3.9e-08 62.0 104 34.6
C07p06950 Brassica napus HOM05D001224 ORTHO05D003044 3.9e-08 62.0 113 34.5
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 3.9e-08 62.0 104 34.6
C05p44360 Brassica napus HOM05D001224 ORTHO05D014478 5.1e-08 61.6 79 39.2
BolC1t04264H Brassica oleracea HOM05D000675 ORTHO05D013785 5.1e-08 61.6 107 34.6
BraA04t17363Z Brassica rapa HOM05D000675 ORTHO05D003044 5.1e-08 61.6 104 34.6
BcaC09g51114 Brassica carinata HOM05D000675 ORTHO05D003044 6.6e-08 61.2 117 32.5
C05p19710 Brassica napus HOM05D000675 ORTHO05D000395 8.7e-08 60.8 107 33.6
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-07 60.5 103 34.0
C01p43180 Brassica napus HOM05D000675 ORTHO05D013785 1.1e-07 60.5 105 34.3
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 1.1e-07 60.5 103 34.0
Carub.0004s0647 Capsella rubella HOM05D000675 ORTHO05D000395 1.1e-07 60.5 108 32.4
Carub.0029s0003 Capsella rubella HOM05D000675 ORTHO05D000395 1.1e-07 60.5 108 32.4
BolC9t57112H Brassica oleracea HOM05D001224 ORTHO05D012331 1.5e-07 60.1 71 42.3
BraA01t00879Z Brassica rapa HOM05D000675 ORTHO05D003044 1.5e-07 60.1 117 31.6
BcaB05g22944 Brassica carinata HOM05D002776 ORTHO05D000395 1.9e-07 59.7 69 49.3
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 3.3e-07 58.9 105 35.2
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 3.3e-07 58.9 103 32.0
BcaB07g31727 Brassica carinata HOM05D000675 ORTHO05D000395 4.3e-07 58.5 103 32.0
BcaC02g09163 Brassica carinata HOM05D000675 ORTHO05D000395 5.6e-07 58.2 105 33.3
BolC7t42719H Brassica oleracea HOM05D000675 ORTHO05D003044 5.6e-07 58.2 108 33.3
BcaB06g27028 Brassica carinata HOM05D002776 ORTHO05D003044 9.6e-07 57.4 30 83.3
BcaC03g16161 Brassica carinata HOM05D000675 ORTHO05D003044 9.6e-07 57.4 104 31.7
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 1.3e-06 57.0 104 31.7
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-06 56.6 103 32.0
A07p06060 Brassica napus HOM05D000675 ORTHO05D020104 1.6e-06 56.6 108 32.4
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 1.6e-06 56.6 104 32.7
BolC4t27258H Brassica oleracea HOM05D000675 ORTHO05D020104 1.6e-06 56.6 108 33.3
Carub.0029s0001 Capsella rubella HOM05D000675 ORTHO05D000395 1.6e-06 56.6 108 31.5
BcaB01g01752 Brassica carinata HOM05D000675 ORTHO05D003044 2.1e-06 56.2 108 31.5
BcaC05g28451 Brassica carinata HOM05D001224 ORTHO05D014478 2.1e-06 56.2 113 34.5
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 2.1e-06 56.2 108 32.4
A01p01770 Brassica napus HOM05D000675 ORTHO05D011634 2.1e-06 56.2 103 31.1
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 2.8e-06 55.8 104 30.8
C08p03650 Brassica napus HOM05D000675 ORTHO05D003044 2.8e-06 55.8 103 32.0
BolC8t48131H Brassica oleracea HOM05D000675 ORTHO05D003044 2.8e-06 55.8 109 31.2
Carub.0008s0715 Capsella rubella HOM05D000675 ORTHO05D000395 3.6e-06 55.5 105 31.4
C02p39480 Brassica napus HOM05D001224 ORTHO05D003044 6.2e-06 54.7 127 32.3
BolC2t09961H Brassica oleracea HOM05D001224 ORTHO05D012331 6.2e-06 54.7 127 32.3
BcaC01g01731 Brassica carinata HOM05D000675 ORTHO05D003044 8.1e-06 54.3 103 31.1


User provided reference genes

Program Settings