Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 6.9e-62 240.4 113 100.0
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 5.0e-52 207.6 126 83.3
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 6.5e-44 180.6 99 88.9
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 1.1e-43 179.9 99 87.9
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 3.2e-43 178.3 99 86.9
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 1.6e-42 176.0 100 88.0
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 1.6e-42 176.0 100 88.0
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 4.7e-42 174.5 100 87.0
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 4.7e-42 174.5 100 87.0
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 3.0e-41 171.8 99 83.8
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 4.0e-41 171.4 99 82.8
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 8.8e-41 170.2 99 82.8
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 9.8e-40 166.8 95 84.2
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 2.8e-39 165.2 99 80.8
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 4.5e-37 157.9 101 80.2
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 2.0e-32 142.5 95 71.6
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 2.0e-32 142.5 95 70.5
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 7.5e-32 140.6 88 77.3
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 1.3e-31 139.8 91 73.6
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 1.7e-31 139.4 95 68.4
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 2.8e-31 138.7 100 71.0
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 2.8e-31 138.7 89 75.3
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 2.8e-31 138.7 91 73.6
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 3.7e-31 138.3 91 73.6
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 3.7e-31 138.3 91 71.4
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 3.7e-31 138.3 88 75.0
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 4.9e-31 137.9 91 71.4
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 4.9e-31 137.9 88 75.0
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 6.3e-31 137.5 91 71.4
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 6.3e-31 137.5 89 74.2
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 6.3e-31 137.5 91 73.6
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 8.3e-31 137.1 88 75.0
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 8.3e-31 137.1 91 70.3
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 8.3e-31 137.1 88 73.9
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 1.1e-30 136.7 92 70.7
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 1.1e-30 136.7 88 73.9
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 1.4e-30 136.3 88 73.9
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 2.4e-30 135.6 88 72.7
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 3.1e-30 135.2 88 72.7
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 4.1e-30 134.8 88 72.7
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 4.1e-30 134.8 88 72.7
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 5.4e-30 134.4 91 69.2
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 9.2e-30 133.7 92 69.6
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 9.2e-30 133.7 91 71.4
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 9.2e-30 133.7 91 71.4
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 9.2e-30 133.7 91 73.6
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 9.2e-30 133.7 102 60.8
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 2.0e-29 132.5 93 68.8
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 2.0e-29 132.5 88 73.9
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 2.7e-29 132.1 91 70.3
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 2.7e-29 132.1 105 61.9
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 3.5e-29 131.7 92 71.7
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 4.5e-29 131.3 92 68.5
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 5.9e-29 131.0 91 70.3
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 5.9e-29 131.0 88 73.9
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 7.8e-29 130.6 88 71.6
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 7.8e-29 130.6 88 71.6
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 1.0e-28 130.2 87 72.4
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 1.0e-28 130.2 100 69.0
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 1.3e-28 129.8 99 65.7
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 1.3e-28 129.8 88 72.7
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 1.7e-28 129.4 88 72.7
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 1.7e-28 129.4 100 69.0
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 2.3e-28 129.0 99 65.7
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 2.3e-28 129.0 91 70.3
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 2.9e-28 128.6 88 71.6
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 2.9e-28 128.6 88 70.5
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 3.8e-28 128.3 100 68.0
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 3.8e-28 128.3 100 66.0
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 3.8e-28 128.3 100 67.0
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 6.6e-28 127.5 99 64.6
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 8.6e-28 127.1 91 68.1
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 1.5e-27 126.3 100 65.0
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 1.9e-27 125.9 95 62.1
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 1.9e-27 125.9 88 68.2
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 1.9e-27 125.9 88 68.2
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 1.9e-27 125.9 88 68.2
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 2.5e-27 125.6 88 71.6
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 3.3e-27 125.2 91 68.1
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 7.3e-27 124.0 88 68.2
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 7.3e-27 124.0 92 67.4
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 7.3e-27 124.0 100 66.0
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 7.3e-27 124.0 100 66.0
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 4.7e-26 121.3 89 68.5
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 4.7e-26 121.3 87 66.7
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 8.0e-26 120.6 88 65.9
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 1.4e-25 119.8 77 75.3
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 1.8e-25 119.4 88 64.8
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 4.0e-25 118.2 98 58.2
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 5.7e-24 114.4 95 60.0
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 5.7e-24 114.4 95 60.0
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 7.5e-24 114.0 115 53.0
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 9.8e-24 113.6 88 61.4
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 6.4e-23 110.9 69 76.8
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 1.1e-22 110.2 66 74.2
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.2e-21 106.7 71 70.4
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 1.6e-21 106.3 69 72.5
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 2.7e-21 105.5 67 74.6
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 1.5e-19 99.8 70 70.0
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 2.5e-19 99.0 65 73.8
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 2.8e-18 95.5 88 61.4
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 1.1e-17 93.6 87 52.9
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 5.2e-17 91.3 88 51.1
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 6.8e-17 90.9 87 50.6
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 2.9e-15 85.5 98 44.9
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 8.6e-12 73.9 50 68.0
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 1.5e-11 73.2 49 67.3
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 1.9e-11 72.8 49 73.5
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 6.4e-07 57.8 39 66.7


User provided reference genes

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