Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p13170 Brassica napus HOM05D011901 ORTHO05D000013 7.7e-126 453.8 219 100.0
A03p64330 Brassica napus HOM05D009136 ORTHO05D011560 9.3e-55 217.6 179 67.0
C05p33190 Brassica napus HOM05D000017 ORTHO05D000013 3.3e-52 209.1 178 65.7
BolC4t23172H Brassica oleracea HOM05D000017 ORTHO05D000013 1.4e-50 203.8 196 60.2
C09p33380 Brassica napus HOM05D000017 ORTHO05D011560 9.1e-50 201.1 177 62.1
C02p28130 Brassica napus HOM05D009136 ORTHO05D011560 2.6e-49 199.5 177 61.6
C04p36260 Brassica napus HOM05D009136 ORTHO05D011560 3.4e-49 199.1 177 62.1
C04p36610 Brassica napus HOM05D009136 ORTHO05D011560 7.7e-49 198.0 177 61.0
C02p22610 Brassica napus HOM05D009136 ORTHO05D000013 1.6e-46 190.3 185 57.3
C04p40820 Brassica napus HOM05D009136 ORTHO05D000013 6.1e-46 188.3 172 61.6
C04p51500 Brassica napus HOM05D009136 ORTHO05D011560 2.3e-45 186.4 207 52.7
BolC3t17680H Brassica oleracea HOM05D009136 ORTHO05D011560 5.1e-45 185.3 191 56.5
C04p15990 Brassica napus HOM05D000017 ORTHO05D000013 1.1e-44 184.1 192 55.2
A05p23630 Brassica napus HOM05D009136 ORTHO05D000013 7.4e-44 181.4 172 59.9
C02p34160 Brassica napus HOM05D009136 ORTHO05D000013 2.2e-43 179.9 160 60.6
C05p37060 Brassica napus HOM05D009136 ORTHO05D011560 1.8e-42 176.8 183 56.3
C02p51030 Brassica napus HOM05D000017 ORTHO05D000013 1.7e-40 170.2 83 97.6
C04p57210 Brassica napus HOM05D000017 ORTHO05D000013 1.7e-40 170.2 83 97.6
C04p20940 Brassica napus HOM05D000017 ORTHO05D000013 5.0e-40 168.7 83 96.4
A03p63760 Brassica napus HOM05D000017 ORTHO05D000013 8.5e-40 167.9 83 96.4
A08p09880 Brassica napus HOM05D009136 ORTHO05D000013 8.5e-40 167.9 83 96.4
A09p24200 Brassica napus HOM05D009136 ORTHO05D000013 8.5e-40 167.9 83 96.4
A03p57830 Brassica napus HOM05D000017 ORTHO05D000013 1.2e-38 164.1 83 95.2
C07p25820 Brassica napus HOM05D000017 ORTHO05D011560 1.1e-36 157.5 83 89.2
C05p35180 Brassica napus HOM05D000017 ORTHO05D000013 1.5e-36 157.1 83 89.2
C01p26860 Brassica napus HOM05D000017 ORTHO05D000013 8.2e-35 151.4 83 86.7
A08p10970 Brassica napus HOM05D009136 ORTHO05D000013 2.5e-31 139.8 76 90.8
A09p24410 Brassica napus HOM05D011901 ORTHO05D000013 2.7e-25 119.8 111 59.5
C02p32240 Brassica napus HOM05D009136 ORTHO05D011560 5.9e-09 65.5 32 93.8
C04p56110 Brassica napus HOM05D001498 ORTHO05D019943 6.6e-08 62.0 82 41.5
C08p06690 Brassica napus HOM05D001498 ORTHO05D027369 1.5e-07 60.8 82 40.2
C03p31490 Brassica napus HOM05D000017 ORTHO05D000013 1.9e-07 60.5 82 41.5
BolC3t15495H Brassica oleracea HOM05D000017 ORTHO05D000013 1.9e-07 60.5 82 41.5
C01p38860 Brassica napus HOM05D011901 ORTHO05D102935 2.5e-07 60.1 47 66.0
C02p09950 Brassica napus HOM05D011901 ORTHO05D096762 2.5e-07 60.1 47 66.0
C06p29700 Brassica napus HOM05D011901 ORTHO05D097793 2.5e-07 60.1 47 66.0
C07p07320 Brassica napus HOM05D011901 ORTHO05D103237 2.5e-07 60.1 47 66.0
C08p14220 Brassica napus HOM05D011901 ORTHO05D103241 2.5e-07 60.1 47 66.0
Atru.chr1.3548 Acer truncatum HOM05D000017 ORTHO05D000013 5.6e-07 58.9 83 36.1
A01p15430 Brassica napus HOM05D011901 ORTHO05D102138 5.6e-07 58.9 47 63.8
A01p27990 Brassica napus HOM05D011901 ORTHO05D099885 5.6e-07 58.9 47 63.8
A02p27480 Brassica napus HOM05D011901 ORTHO05D098148 5.6e-07 58.9 47 63.8
A03p63330 Brassica napus HOM05D011901 ORTHO05D102795 5.6e-07 58.9 47 63.8
A06p23340 Brassica napus HOM05D011901 ORTHO05D098496 5.6e-07 58.9 47 63.8
A07p05570 Brassica napus HOM05D011901 ORTHO05D100434 5.6e-07 58.9 47 63.8
C09p28450 Brassica napus HOM05D001498 ORTHO05D027369 5.6e-07 58.9 82 40.2
A01p26280 Brassica napus HOM05D001498 ORTHO05D011448 7.3e-07 58.5 80 41.2
C09p27460 Brassica napus HOM05D001498 ORTHO05D013028 7.3e-07 58.5 82 40.2
Atru.chr9.32 Acer truncatum HOM05D000017 ORTHO05D000013 9.5e-07 58.2 81 37.0
A06p27650 Brassica napus HOM05D011901 ORTHO05D100743 1.2e-06 57.8 47 61.7
A08p09500 Brassica napus HOM05D001498 ORTHO05D011448 1.6e-06 57.4 82 40.2
Atru.chr9.489 Acer truncatum HOM05D000017 ORTHO05D000013 2.1e-06 57.0 81 35.8
C04p55370 Brassica napus HOM05D007818 ORTHO05D000013 2.1e-06 57.0 80 42.5
Oeu044663.1 Olea europaea HOM05D000017 ORTHO05D000013 2.1e-06 57.0 80 36.2
C01p45330 Brassica napus HOM05D000017 ORTHO05D000013 2.8e-06 56.6 80 41.2
C04p47810 Brassica napus HOM05D008468 ORTHO05D000013 2.8e-06 56.6 92 40.2
C05p37810 Brassica napus HOM05D000017 ORTHO05D000013 2.8e-06 56.6 80 41.2
C07p06900 Brassica napus HOM05D007818 ORTHO05D000013 2.8e-06 56.6 80 41.2
BolC4t26383H Brassica oleracea HOM05D008468 ORTHO05D000013 2.8e-06 56.6 92 40.2
BolC7t41109H Brassica oleracea HOM05D008468 ORTHO05D000013 2.8e-06 56.6 92 40.2
BolC8t49595H Brassica oleracea HOM05D008468 ORTHO05D000013 2.8e-06 56.6 92 40.2
BraA01t02470Z Brassica rapa HOM05D000017 ORTHO05D000013 2.8e-06 56.6 80 41.2
Thhalv10002358m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 2.8e-06 56.6 118 34.7
C07p00660 Brassica napus HOM05D007818 ORTHO05D000013 3.6e-06 56.2 80 41.2
Oeu045795.1 Olea europaea HOM05D000017 ORTHO05D000013 3.6e-06 56.2 80 37.5
THA.LOC104809906 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.6e-06 56.2 107 33.6
C03p58250 Brassica napus HOM05D000017 ORTHO05D000013 4.7e-06 55.8 80 41.2
C06p05160 Brassica napus HOM05D000017 ORTHO05D000013 4.7e-06 55.8 80 37.5


User provided reference genes

Program Settings