Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p10980 Brassica napus HOM05D000663 ORTHO05D024432 1.1e-31 139.4 72 100.0
BcaC04g23215 Brassica carinata HOM05D000663 ORTHO05D024432 3.8e-29 131.0 72 93.1
BolC9t53995H Brassica oleracea HOM05D000663 ORTHO05D024432 3.8e-29 131.0 72 93.1
C09p11030 Brassica napus HOM05D000663 ORTHO05D024432 2.5e-28 128.3 72 93.1
Sp4g11170 Schrenkiella parvula HOM05D000663 ORTHO05D000834 1.1e-15 86.3 73 68.5
Carub.0004s0929 Capsella rubella HOM05D000663 ORTHO05D000834 6.9e-15 83.6 73 67.1
AT2G28370 Arabidopsis thaliana HOM05D000663 ORTHO05D000834 2.0e-14 82.0 73 65.8
AL4G21660 Arabidopsis lyrata HOM05D000663 ORTHO05D000834 2.6e-14 81.6 73 65.8
Thhalv10017309m.g Eutrema salsugineum HOM05D000663 ORTHO05D000834 7.7e-14 80.1 73 64.4
Aa31LG5G7850 Aethionema arabicum HOM05D000663 ORTHO05D000834 1.3e-13 79.3 73 64.4
THA.LOC104815746 Tarenaya hassleriana HOM05D000663 ORTHO05D000834 1.7e-13 79.0 73 63.0
A07p18940 Brassica napus HOM05D000663 ORTHO05D000834 6.5e-13 77.0 73 63.0
BraA07t29599Z Brassica rapa HOM05D000663 ORTHO05D000834 6.5e-13 77.0 73 63.0
BcaB06g28209 Brassica carinata HOM05D000663 ORTHO05D000834 1.1e-12 76.3 74 63.5
CARHR121320 Cardamine hirsuta HOM05D000663 ORTHO05D000834 1.1e-12 76.3 73 63.0
THA.LOC104826367 Tarenaya hassleriana HOM05D000663 ORTHO05D000834 2.5e-12 75.1 73 61.6
BolC4t27273H Brassica oleracea HOM05D000663 ORTHO05D000834 4.2e-12 74.3 73 58.9
A04p21490 Brassica napus HOM05D000663 ORTHO05D000834 9.4e-12 73.2 73 57.5
BraA04t17715Z Brassica rapa HOM05D000663 ORTHO05D000834 9.4e-12 73.2 73 57.5
BcaC02g08182 Brassica carinata HOM05D000663 ORTHO05D000834 1.2e-11 72.8 73 57.5
C04p57520 Brassica napus HOM05D000663 ORTHO05D000834 1.2e-11 72.8 73 57.5
Eucgr.J00926 Eucalyptus grandis HOM05D000663 ORTHO05D000834 6.1e-11 70.5 73 60.3
C04p23110 Brassica napus HOM05D000663 ORTHO05D000834 7.9e-11 70.1 74 60.8
Actinidia03724 Actinidia chinensis HOM05D000663 ORTHO05D000834 1.1e-09 66.2 73 57.5
Manes.04G020000 Manihot esculenta HOM05D000663 ORTHO05D000834 4.3e-09 64.3 73 54.8
PGR119G1301 Punica granatum HOM05D000663 ORTHO05D000834 4.3e-09 64.3 73 56.2
Cpa.g.sc545.2 Carica papaya HOM05D000663 ORTHO05D000834 5.7e-09 63.9 73 56.2
MELO3C004889.2 Cucumis melo HOM05D000663 ORTHO05D000834 7.4e-09 63.5 73 57.5
GSVIVG01025194001 Vitis vinifera HOM05D000663 ORTHO05D000834 9.7e-09 63.2 73 56.2
Ciclev10029379m.g Citrus clementina HOM05D000663 ORTHO05D000834 1.3e-08 62.8 77 53.2
Dinv32737 Davidia involucrata HOM05D000663 ORTHO05D000834 3.7e-08 61.2 73 54.8
Lj2A1026T30 Lonicera japonica HOM05D000663 ORTHO05D000834 6.3e-08 60.5 73 54.8
Nitab4.5_0003131g0020 Nicotiana tabacum HOM05D000663 ORTHO05D000834 1.1e-07 59.7 73 53.4
Nitab4.5_0004624g0060 Nicotiana tabacum HOM05D000663 ORTHO05D000834 1.1e-07 59.7 73 53.4
ClCG01G013670 Citrullus lanatus HOM05D000663 ORTHO05D000834 1.8e-07 58.9 73 54.8
Sed0024133 Sechium edule HOM05D000663 ORTHO05D000834 2.4e-07 58.5 73 53.4
vmacro14433 Vaccinium macrocarpon HOM05D000663 ORTHO05D000834 2.4e-07 58.5 71 52.1
BolC4t23805H Brassica oleracea HOM05D000663 ORTHO05D024432 3.1e-07 58.2 62 59.7
ClCG04G009120 Citrullus lanatus HOM05D000663 ORTHO05D000834 3.1e-07 58.2 73 54.8
Manes.11G146200 Manihot esculenta HOM05D000663 ORTHO05D000834 9.1e-07 56.6 73 52.1
QL08p055774 Quercus lobata HOM05D000663 ORTHO05D000834 9.1e-07 56.6 71 50.7
TAR623G0532 Trochodendron aralioides HOM05D000663 ORTHO05D000834 9.1e-07 56.6 73 54.8
CANSAT54G2104 Cannabis sativa HOM05D000663 ORTHO05D000834 1.2e-06 56.2 73 52.1
MELO3C014231.2 Cucumis melo HOM05D000663 ORTHO05D000834 1.2e-06 56.2 73 53.4
CsaV3_6G039640 Cucumis sativus L. HOM05D000663 ORTHO05D000834 1.2e-06 56.2 73 53.4
SHI23750 Sapria himalayana HOM05D000663 ORTHO05D000834 1.2e-06 56.2 73 50.7
Sed0013865 Sechium edule HOM05D000663 ORTHO05D000834 1.2e-06 56.2 67 50.7
Hma1.2p1_0058F.1_g032450 Hydrangea macrophylla HOM05D000663 ORTHO05D000834 1.5e-06 55.8 73 52.1
Peaxi162Scf00270g00417 Petunia axillaris HOM05D000663 ORTHO05D000834 1.5e-06 55.8 73 49.3
TAR369G1067 Trochodendron aralioides HOM05D000663 ORTHO05D000834 1.5e-06 55.8 73 53.4
CSS0043917 Camellia sinensis var. sinensis HOM05D000663 ORTHO05D000834 2.6e-06 55.1 73 49.3
Solyc11g069480.2 Solanum lycopersicum HOM05D000663 ORTHO05D000834 2.6e-06 55.1 73 52.1
Duzib150G0755 Durio zibethinus HOM05D000663 ORTHO05D000834 3.4e-06 54.7 74 51.4
Potri.009G014600 Populus trichocarpa HOM05D000663 ORTHO05D000834 3.4e-06 54.7 73 50.7
PGSC0003DMG400008080 Solanum tuberosum HOM05D000663 ORTHO05D000834 5.9e-06 53.9 73 50.7
CiPaw.14G081300 Carya illinoinensis HOM05D000663 ORTHO05D000834 7.7e-06 53.5 73 52.1
Glyma.12G075900 Glycine max HOM05D000663 ORTHO05D000834 7.7e-06 53.5 75 52.0


User provided reference genes

Program Settings