Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p10040 Brassica napus HOM05D009868 ORTHO05D012410 5.2e-116 421.8 346 100.0
BcaC04g23297 Brassica carinata HOM05D009868 ORTHO05D012410 9.1e-113 411.0 346 98.8
BolC9t53908H Brassica oleracea HOM05D009868 ORTHO05D012410 9.1e-113 411.0 346 98.6
C09p10000 Brassica napus HOM05D009868 ORTHO05D012410 5.9e-112 408.3 346 98.6
A09p08780 Brassica napus HOM05D009868 ORTHO05D012410 1.5e-102 377.1 346 94.2
BcaB04g19986 Brassica carinata HOM05D009868 ORTHO05D012410 4.0e-68 262.7 377 70.0
Thhalv10005693m.g Eutrema salsugineum HOM05D009868 ORTHO05D012410 7.8e-56 221.9 349 55.6
Sp2g27760 Schrenkiella parvula HOM05D009868 ORTHO05D012410 2.7e-48 196.8 349 65.6
BcaB02g09812 Brassica carinata HOM05D009868 ORTHO05D012410 1.7e-34 151.0 293 50.2
C02p63510 Brassica napus HOM05D009868 ORTHO05D012410 6.0e-32 142.5 399 57.4
BolC2t12416H Brassica oleracea HOM05D009868 ORTHO05D012410 6.0e-32 142.5 399 57.4
BraA06t26085Z Brassica rapa HOM05D009868 ORTHO05D027327 3.9e-31 139.8 343 43.4
AL8G42140 Arabidopsis lyrata HOM05D009868 ORTHO05D012410 2.8e-29 133.7 351 37.6
BcaB07g29752 Brassica carinata HOM05D009868 ORTHO05D012410 1.1e-28 131.7 365 46.0
CARHR278680 Cardamine hirsuta HOM05D009868 ORTHO05D012410 9.0e-28 128.6 353 45.0
C09p10060 Brassica napus HOM05D009868 ORTHO05D012410 8.4e-26 122.1 116 93.1
AT5G64690 Arabidopsis thaliana HOM05D009868 ORTHO05D012410 8.7e-23 112.1 347 41.2
A02p43410 Brassica napus HOM05D009868 ORTHO05D012410 8.7e-23 112.1 392 55.9
A06p31480 Brassica napus HOM05D009868 ORTHO05D027327 7.4e-22 109.0 289 48.1
BraA02t09266Z Brassica rapa HOM05D009868 ORTHO05D012410 1.1e-17 95.1 389 51.7
BcaC03g18271 Brassica carinata HOM05D009868 ORTHO05D012410 5.5e-17 92.8 398 51.8
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 6.1e-16 89.4 96 64.6
Carub.0008s2550 Capsella rubella HOM05D009868 ORTHO05D012410 1.7e-10 71.2 349 51.6
BolC3t18406H Brassica oleracea HOM05D009868 ORTHO05D027327 5.5e-09 66.2 60 60.0
BraA09t36530Z Brassica rapa HOM05D009868 ORTHO05D012410 5.7e-06 56.2 27 96.3


User provided reference genes

Program Settings