Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p09780 Brassica napus HOM05D007524 ORTHO05D009475 4.3e-217 757.7 377 100.0
BolC9t53889H Brassica oleracea HOM05D007524 ORTHO05D009475 6.9e-191 670.6 342 98.5
BcaC04g23318 Brassica carinata HOM05D007524 ORTHO05D009475 1.6e-187 659.4 329 100.0
A09p08680 Brassica napus HOM05D007524 ORTHO05D009475 2.2e-176 622.5 336 93.8
BraA09t36516Z Brassica rapa HOM05D007524 ORTHO05D009475 1.2e-174 616.7 340 92.6
BcaB04g19971 Brassica carinata HOM05D007524 ORTHO05D009475 7.7e-174 614.0 333 93.7
Sp2g27600 Schrenkiella parvula HOM05D007524 ORTHO05D009475 5.5e-164 581.3 335 88.4
Carub.0008s2532 Capsella rubella HOM05D007524 ORTHO05D009475 1.8e-154 549.7 334 82.9
AT5G64520 Arabidopsis thaliana HOM05D007524 ORTHO05D009475 4.0e-154 548.5 345 81.2
AL8G41910 Arabidopsis lyrata HOM05D007524 ORTHO05D009475 2.0e-153 546.2 339 82.6
CARHR278490 Cardamine hirsuta HOM05D007524 ORTHO05D009475 5.6e-148 528.1 338 79.0
Thhalv10005594m.g Eutrema salsugineum HOM05D007524 ORTHO05D009475 1.2e-145 520.4 331 81.0
THA.LOC104818453 Tarenaya hassleriana HOM05D007524 ORTHO05D009475 2.0e-129 466.5 340 70.0
Aa31LG1G17400 Aethionema arabicum HOM05D007524 ORTHO05D009475 3.4e-129 465.7 331 72.2
Duzib248G0930 Durio zibethinus HOM05D007524 ORTHO05D009475 1.9e-92 343.6 337 51.9
Hma1.2p1_0057F.1_g032020 Hydrangea macrophylla HOM05D007524 ORTHO05D009475 3.7e-91 339.3 331 55.3
Thecc.02G312000 Theobroma cacao HOM05D007524 ORTHO05D009475 3.7e-91 339.3 333 52.6
Gohir.A13G091600 Gossypium hirsutum HOM05D007524 ORTHO05D009475 2.4e-90 336.7 335 53.7
Gorai.013G099200 Gossypium raimondii HOM05D007524 ORTHO05D009475 1.2e-89 334.3 335 54.3
Actinidia07457 Actinidia chinensis HOM05D007524 ORTHO05D009475 1.0e-88 331.3 335 52.5
Dinv25593 Davidia involucrata HOM05D007524 ORTHO05D009475 5.0e-88 328.9 325 56.3
GSVIVG01022414001 Vitis vinifera HOM05D007524 ORTHO05D009475 8.5e-88 328.2 320 55.6
TAR628G0034 Trochodendron aralioides HOM05D007524 ORTHO05D009475 3.2e-87 326.2 329 54.4
FAN07G0447 Fragaria x ananassa HOM05D007524 ORTHO05D009475 7.2e-87 325.1 351 53.0
RcHm_v2.0_Chr4g0446351 Rosa chinensis HOM05D007524 ORTHO05D009475 1.5e-84 317.4 329 51.4
FvH4_4g36590 Fragaria vesca HOM05D007524 ORTHO05D009475 5.7e-84 315.5 354 51.7
Atru.chr11.1209 Acer truncatum HOM05D007524 ORTHO05D009475 6.3e-83 312.0 370 48.4
PSO017G6978 Papaver somniferum HOM05D007524 ORTHO05D009475 8.2e-83 311.6 333 52.6
FAN17G0147 Fragaria x ananassa HOM05D007524 ORTHO05D009475 1.1e-82 311.2 336 52.7
Haze_11736 Corylus avellana HOM05D007524 ORTHO05D009475 1.4e-82 310.8 383 48.3
MD16G1006200 Malus domestica HOM05D007524 ORTHO05D009475 1.8e-82 310.5 328 51.8
Gohir.D13G086900 Gossypium hirsutum HOM05D007524 ORTHO05D009475 5.3e-82 308.9 299 55.2
Peaxi162Scf00032g00619 Petunia axillaris HOM05D007524 ORTHO05D009475 4.5e-81 305.8 341 51.6
Prupe.1G344400 Prunus persica HOM05D007524 ORTHO05D009475 5.9e-81 305.4 316 52.2
arahy.Tifrunner.gnm1.ann1.SSM27G Arachis hypogaea HOM05D007524 ORTHO05D009475 1.0e-80 304.7 327 49.8
Sopen01g004060 Solanum pennellii HOM05D007524 ORTHO05D009475 1.0e-80 304.7 334 50.9
TPR.G21554 Trifolium pratense HOM05D007524 ORTHO05D009475 2.2e-80 303.5 335 50.1
Medtr4g074200 Medicago truncatula HOM05D007524 ORTHO05D009475 2.9e-80 303.1 339 49.9
Solyc01g008520.3 Solanum lycopersicum HOM05D007524 ORTHO05D009475 2.9e-80 303.1 334 50.9
arahy.Tifrunner.gnm1.ann1.NAL0L4 Arachis hypogaea HOM05D007524 ORTHO05D009475 5.0e-80 302.4 324 49.7
FAN12G0445 Fragaria x ananassa HOM05D007524 ORTHO05D009475 5.0e-80 302.4 293 55.6
Lj3g0014826 Lotus japonicus HOM05D007524 ORTHO05D009475 2.5e-79 300.1 333 50.2
Manes.03G082500 Manihot esculenta HOM05D007524 ORTHO05D009475 3.2e-79 299.7 331 50.5
Sc06g0003090 Simmondsia chinensis HOM05D007524 ORTHO05D009475 5.5e-79 298.9 331 50.5
Aqoxy5G02489 Aquilegia oxysepala HOM05D007524 ORTHO05D009475 7.9e-78 295.0 333 48.3
Sed0011089 Sechium edule HOM05D007524 ORTHO05D009475 1.8e-77 293.9 324 47.8
Eucgr.J00844 Eucalyptus grandis HOM05D007524 ORTHO05D009475 1.1e-76 291.2 332 48.8
CsaV3_5G013190 Cucumis sativus L. HOM05D007524 ORTHO05D009475 5.7e-76 288.9 337 46.3
MELO3C020032.2 Cucumis melo HOM05D007524 ORTHO05D009475 9.7e-76 288.1 325 47.4
PGR119G1695 Punica granatum HOM05D007524 ORTHO05D009475 1.3e-75 287.7 337 48.4
Migut.C01263 Erythranthe guttata HOM05D007524 ORTHO05D009475 2.8e-75 286.6 326 48.8
Glyma.11G104200 Glycine max HOM05D007524 ORTHO05D009475 1.8e-74 283.9 331 47.1
Psat7g173160 Pisum sativum HOM05D007524 ORTHO05D009475 2.4e-74 283.5 299 50.5
PSO063G3654 Papaver somniferum HOM05D007524 ORTHO05D009475 5.3e-74 282.3 286 55.6
AUR62039047 Chenopodium quinoa HOM05D007524 ORTHO05D009475 1.2e-73 281.2 388 44.3
Cc00_g05860 Coffea canephora HOM05D007524 ORTHO05D009475 1.2e-73 281.2 329 46.5
VMungo1127G1744 Vigna mungo HOM05D007524 ORTHO05D009475 3.4e-73 279.6 332 47.3
Nitab4.5_0000825g0060 Nicotiana tabacum HOM05D007524 ORTHO05D009475 5.9e-73 278.9 335 48.7
Rhsim08G0000700 Rhododendron simsii HOM05D007524 ORTHO05D009475 5.9e-73 278.9 319 50.8
Nitab4.5_0001747g0050 Nicotiana tabacum HOM05D007524 ORTHO05D009475 1.3e-72 277.7 329 48.6
ECA247G1633 Erigeron canadensis HOM05D007524 ORTHO05D009475 7.2e-71 271.9 328 45.7
Glyma.12G029200 Glycine max HOM05D007524 ORTHO05D009475 9.4e-71 271.6 323 48.0
Lalb_Chr19g0139281 Lupinus albus HOM05D007524 ORTHO05D009475 5.2e-69 265.8 332 48.8
CANSAT11G0990 Cannabis sativa HOM05D007524 ORTHO05D009475 5.3e-66 255.8 251 55.4
Lsat_1_v5_gn_1_28521 Lactuca sativa HOM05D007524 ORTHO05D009475 5.3e-66 255.8 331 45.3
SGA_v2.0_scaffold118G32494 Striga asiatica HOM05D007524 ORTHO05D009475 3.5e-65 253.1 350 42.0
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 2.2e-64 250.4 285 53.0
Hund06881 Selenicereus undatus HOM05D007524 ORTHO05D009475 5.0e-64 249.2 335 43.0
HanXRQChr04g0100921 Helianthus annuus HOM05D007524 ORTHO05D009475 3.2e-63 246.5 330 44.5
vmacro18683 Vaccinium macrocarpon HOM05D007524 ORTHO05D009475 1.6e-62 244.2 277 52.0
ATR0584G209 Amborella trichopoda HOM05D007524 ORTHO05D009475 2.7e-62 243.4 286 46.5
EL10Ac4g08947 Beta vulgaris HOM05D007524 ORTHO05D009475 4.7e-62 242.7 402 36.8
Ca_03043_v3 Cicer arietinum L. HOM05D007524 ORTHO05D009475 2.6e-60 236.9 227 53.7
Zm00001eb146450 Zea mays HOM05D007524 ORTHO05D009475 2.7e-57 226.9 343 38.8
Phvul.011G032400 Phaseolus vulgaris HOM05D007524 ORTHO05D009475 1.7e-56 224.2 285 45.6
unitig_46.g18111 Utricularia gibba HOM05D007524 ORTHO05D009475 2.1e-54 217.2 330 40.9
CiPaw.06G059700 Carya illinoinensis HOM05D007524 ORTHO05D009475 3.1e-50 203.4 221 49.8
AUR62004790 Chenopodium quinoa HOM05D007524 ORTHO05D009475 2.0e-49 200.7 333 38.7
Mapoly0070s0006 Marchantia polymorpha HOM05D007524 ORTHO05D009475 4.5e-49 199.5 346 37.3
DCAR_013072 Daucus carota HOM05D007524 ORTHO05D009475 4.0e-45 186.4 328 37.5
SMO367G0885 Selaginella moellendorffii HOM05D007524 ORTHO05D009475 2.0e-44 184.1 357 33.6
AagrBONN_evm.TU.Sc2ySwM_368.2219 Anthoceros agrestis HOM05D007524 ORTHO05D009475 2.3e-40 170.6 313 35.1
Nn5g27871 Nelumbo nucifera HOM05D007524 ORTHO05D009475 5.0e-40 169.5 115 67.8
Pp3c1_6220 Physcomitrium patens HOM05D007524 ORTHO05D009475 8.9e-37 158.7 336 35.4
PGSC0003DMG400019097 Solanum tuberosum HOM05D007524 ORTHO05D009475 2.9e-35 153.7 118 65.3
PGSC0003DMG401031484 Solanum tuberosum HOM05D007524 ORTHO05D009475 3.7e-35 153.3 106 68.9
Cpa.g.sc63.24 Carica papaya HOM05D007524 ORTHO05D009475 1.1e-34 151.8 101 70.3
COL.COLO4_27673 Corchorus olitorius HOM05D007524 ORTHO05D009475 3.2e-34 150.2 111 60.4
ClCG11G001140 Citrullus lanatus HOM05D007524 ORTHO05D009475 2.7e-33 147.1 108 65.7
Nn5g27870 Nelumbo nucifera HOM05D007524 ORTHO05D009475 3.0e-32 143.7 191 44.0
CAN.G821.7 Capsicum annuum HOM05D007524 ORTHO05D009475 6.6e-32 142.5 111 64.0
PGSC0003DMG400010497 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.8e-29 134.4 177 45.2
CBR_g6685 Chara braunii HOM05D007524 ORTHO05D009475 2.1e-17 94.4 164 35.4
Ah.06g191680 Amaranthus hybridus HOM05D007524 ORTHO05D009475 3.1e-13 80.5 58 69.0
MCO09G042 Micromonas commoda HOM05D007524 ORTHO05D009475 7.6e-12 75.9 201 29.4
Cre06.g278174 Chlamydomonas reinhardtii HOM05D007524 ORTHO05D009475 2.1e-06 57.8 454 20.9
PGSC0003DMG401010496 Solanum tuberosum HOM05D007524 ORTHO05D009475 2.1e-06 57.8 51 54.9
PRCOL_00006630 Prasinoderma coloniale HOM05D007524 ORTHO05D009475 2.8e-06 57.4 208 25.5


User provided reference genes

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