Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 1.3e-40 169.5 94 100.0
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 1.3e-40 169.5 94 100.0
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 3.1e-39 164.9 95 97.9
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 3.1e-39 164.9 95 97.9
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 1.9e-28 129.0 72 100.0
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 9.3e-28 126.7 72 94.4
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 9.6e-25 116.7 72 88.9
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 1.4e-23 112.8 72 84.7
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 1.3e-21 106.3 72 81.9
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 1.1e-20 103.2 79 70.9
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 2.5e-20 102.1 72 76.4
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 1.0e-18 96.7 72 75.0
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 1.8e-18 95.9 92 60.9
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 5.1e-18 94.4 72 70.8
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 5.1e-18 94.4 72 70.8
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 6.7e-18 94.0 72 70.8
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 1.1e-17 93.2 72 70.8
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.3e-17 91.7 72 68.1
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 4.3e-17 91.3 72 70.8
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 5.7e-17 90.9 72 69.4
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 5.7e-17 90.9 72 72.2
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 9.7e-17 90.1 72 66.7
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 1.6e-16 89.4 72 66.7
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 2.2e-16 89.0 72 70.8
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 2.2e-16 89.0 72 66.7
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 2.8e-16 88.6 72 68.1
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 2.8e-16 88.6 73 69.9
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 2.8e-16 88.6 73 69.9
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 4.8e-16 87.8 70 74.3
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 8.2e-16 87.0 72 68.1
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 8.2e-16 87.0 72 69.4
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 4.1e-15 84.7 70 68.6
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 5.3e-15 84.3 72 72.2
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 6.9e-15 84.0 72 66.7
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 1.2e-14 83.2 72 66.7
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 1.5e-14 82.8 72 66.7
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 2.0e-14 82.4 72 65.3
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 2.0e-14 82.4 71 70.4
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 4.5e-14 81.3 72 63.9
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 7.7e-14 80.5 70 65.7
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 1.7e-13 79.3 70 62.9
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 2.2e-13 79.0 71 66.2
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 2.2e-13 79.0 70 65.7
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 2.9e-13 78.6 68 66.2
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 2.9e-13 78.6 76 61.8
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 3.8e-13 78.2 86 55.8
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 3.8e-13 78.2 73 60.3
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 5.0e-13 77.8 73 60.3
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 5.0e-13 77.8 70 62.9
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 6.5e-13 77.4 74 66.2
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 8.5e-13 77.0 70 62.9
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 1.1e-12 76.6 73 58.9
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 1.9e-12 75.9 70 61.4
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 2.5e-12 75.5 70 64.3
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 4.2e-12 74.7 74 64.9
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 7.2e-12 73.9 123 47.2
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 9.4e-12 73.6 70 62.9
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 9.4e-12 73.6 70 60.0
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 9.4e-12 73.6 70 60.0
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 3.6e-11 71.6 88 52.3
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 2.3e-10 68.9 71 57.7
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 6.7e-10 67.4 71 56.3
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 6.7e-10 67.4 72 55.6
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 2.0e-09 65.9 67 58.2
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 1.3e-08 63.2 72 59.7
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 1.7e-08 62.8 74 54.1
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 1.7e-08 62.8 74 52.7
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 2.2e-08 62.4 70 54.3
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 2.2e-08 62.4 85 47.1
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 3.7e-08 61.6 72 58.3
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 3.7e-08 61.6 72 54.2
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 3.1e-07 58.5 87 47.1
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 5.3e-07 57.8 70 51.4
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 5.3e-07 57.8 86 45.3
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 5.9e-06 54.3 67 52.2
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 5.9e-06 54.3 70 50.0
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 7.7e-06 53.9 75 49.3


User provided reference genes

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