Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 3.4e-206 721.5 378 100.0
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 3.4e-206 721.5 378 100.0
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 5.0e-205 717.6 378 99.2
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 7.4e-201 703.7 378 97.1
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 3.7e-200 701.4 378 96.8
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 5.0e-197 691.0 378 95.5
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 9.7e-193 676.8 378 93.4
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 8.2e-192 673.7 378 93.1
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 1.4e-191 672.9 376 93.4
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 9.1e-191 670.2 378 93.1
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 7.7e-190 667.2 374 93.0
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 3.8e-189 664.8 378 92.3
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 3.2e-188 661.8 379 91.8
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 2.1e-187 659.1 378 91.5
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.8e-186 656.0 378 91.3
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 1.0e-173 613.6 396 82.6
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 4.1e-167 591.7 378 81.7
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 3.3e-148 528.9 380 73.4
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 9.5e-148 527.3 380 72.4
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.2e-147 526.9 380 72.1
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 2.8e-147 525.8 380 72.9
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 2.0e-145 519.6 378 72.5
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 3.4e-145 518.8 380 71.3
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 3.4e-145 518.8 378 70.9
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 4.9e-144 515.0 380 70.5
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 8.3e-144 514.2 381 70.9
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 3.2e-143 512.3 408 67.4
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 4.1e-143 511.9 380 70.8
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 5.4e-143 511.5 355 73.2
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 1.2e-142 510.4 381 70.6
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 1.6e-142 510.0 381 69.0
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 2.7e-142 509.2 380 69.5
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 6.0e-142 508.1 380 70.5
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 6.0e-142 508.1 381 69.8
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 1.7e-141 506.5 380 70.0
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 2.3e-141 506.1 379 68.3
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 3.9e-141 505.4 380 69.5
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 3.9e-141 505.4 381 69.6
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 8.6e-141 504.2 381 69.8
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 8.6e-141 504.2 381 69.0
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 1.1e-140 503.8 371 71.4
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 1.5e-140 503.4 381 68.8
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 1.2e-139 500.4 380 68.7
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 2.8e-139 499.2 400 67.8
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.4e-138 496.9 389 68.6
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 1.4e-138 496.9 383 69.2
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 1.8e-138 496.5 384 69.0
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 2.3e-138 496.1 380 67.6
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 5.2e-138 495.0 380 67.6
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 5.2e-138 495.0 381 66.9
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 5.2e-138 495.0 380 68.2
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 5.2e-138 495.0 380 67.1
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 6.8e-138 494.6 381 67.5
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 8.9e-138 494.2 380 68.7
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 3.4e-137 492.3 379 66.8
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 7.6e-137 491.1 373 67.6
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 2.2e-136 489.6 404 64.6
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 6.4e-136 488.0 410 63.7
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 8.4e-136 487.6 380 66.6
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 1.1e-135 487.3 378 66.9
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 3.2e-135 485.7 380 67.6
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 4.1e-135 485.3 277 92.4
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 5.4e-135 485.0 383 66.3
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 9.2e-135 484.2 380 66.6
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 6.0e-134 481.5 379 65.7
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 7.8e-134 481.1 380 64.7
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 1.7e-133 479.9 381 65.4
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 3.9e-133 478.8 380 65.5
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 6.6e-133 478.0 389 64.8
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 5.6e-132 474.9 380 65.3
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 1.2e-131 473.8 379 64.9
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 1.6e-131 473.4 380 65.0
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 6.2e-131 471.5 435 60.9
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 1.1e-130 470.7 384 64.8
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 1.4e-130 470.3 433 59.6
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 1.8e-130 469.9 381 63.5
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 8.9e-130 467.6 381 64.0
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 8.9e-130 467.6 379 63.3
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 1.2e-129 467.2 379 63.6
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 4.4e-129 465.3 405 61.7
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 7.6e-129 464.5 381 66.9
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 1.9e-127 459.9 433 59.8
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 2.4e-127 459.5 380 63.4
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 9.3e-127 457.6 383 63.7
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 2.1e-126 456.4 378 63.8
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 2.5e-124 449.5 383 61.1
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 7.3e-124 448.0 387 61.8
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 7.3e-124 448.0 325 71.1
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 9.6e-124 447.6 363 67.8
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 9.6e-124 447.6 410 60.0
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 2.1e-123 446.4 383 61.4
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 9.0e-122 441.0 380 61.6
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.4e-119 433.7 379 60.7
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 9.3e-119 431.0 385 60.0
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.0e-117 427.6 380 61.6
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 3.6e-115 419.1 460 51.7
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 1.1e-114 417.5 383 58.2
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 2.0e-113 413.3 331 64.0
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 1.6e-110 403.7 379 57.5
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 4.8e-107 392.1 411 55.0
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 9.0e-106 387.9 276 73.2
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.2e-105 387.5 385 56.6
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.2e-104 383.3 383 55.1
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 4.9e-104 382.1 385 54.8
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 3.3e-92 342.8 383 50.9
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 9.7e-76 288.1 158 93.7
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.4e-74 283.5 158 93.0
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 5.3e-74 282.3 158 92.4
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 3.3e-68 263.1 418 40.2
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 1.6e-65 254.2 238 55.9
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.7e-62 243.4 158 82.9
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 3.0e-61 240.0 453 36.4
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 2.5e-47 193.7 338 39.1
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.9e-43 180.3 147 64.6
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 1.8e-37 161.0 163 49.1
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 1.2e-36 158.3 86 96.5
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 7.5e-36 155.6 129 60.5
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 6.0e-33 146.0 126 60.3
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 7.5e-28 129.0 108 63.0
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 1.3e-24 118.2 103 56.3
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 7.3e-23 112.5 90 64.4
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 8.9e-21 105.5 104 51.9
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 2.9e-11 73.9 124 39.5
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 4.6e-09 66.6 160 30.6
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 6.6e-08 62.8 39 76.9
Lj9A174G23 Lonicera japonica HOM05D002866 ORTHO05D234197 1.1e-07 62.0 115 38.3
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 1.5e-07 61.6 39 74.4


User provided reference genes

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