Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p07690 Brassica napus HOM05D003705 ORTHO05D007730 6.4e-135 484.6 341 100.0
BolC9t53686H Brassica oleracea HOM05D003705 ORTHO05D007730 6.5e-87 325.1 257 78.6
BcaC04g23496 Brassica carinata HOM05D003705 ORTHO05D007730 4.2e-46 189.5 101 99.0
BcaNung03728 Brassica carinata HOM05D003705 ORTHO05D007730 2.3e-36 157.1 176 86.4
A06p34380 Brassica napus HOM05D003705 ORTHO05D007730 1.6e-24 117.9 223 63.2
BraA06t26368Z Brassica rapa HOM05D003705 ORTHO05D007730 1.6e-24 117.9 223 63.2
BcaNung03849 Brassica carinata HOM05D003705 ORTHO05D007730 6.6e-23 112.5 223 62.8
C07p44150 Brassica napus HOM05D003705 ORTHO05D007730 6.6e-23 112.5 223 62.8
BolC7t44939H Brassica oleracea HOM05D003705 ORTHO05D007730 6.6e-23 112.5 223 62.8
Thhalv10003885m.g Eutrema salsugineum HOM05D003705 ORTHO05D007730 6.6e-23 112.5 257 56.4
MD16G1004400 Malus domestica HOM05D003705 ORTHO05D007730 2.5e-22 110.5 101 55.4
AT5G23400 Arabidopsis thaliana HOM05D003705 ORTHO05D007730 7.3e-22 109.0 257 56.0
Sp2g23760 Schrenkiella parvula HOM05D003705 ORTHO05D007730 9.5e-22 108.6 223 61.9
AL6G34670 Arabidopsis lyrata HOM05D003705 ORTHO05D007730 4.7e-21 106.3 257 55.3
Aa31LG11G2840 Aethionema arabicum HOM05D003705 ORTHO05D007730 5.2e-20 102.8 223 60.5
CARHR190100 Cardamine hirsuta HOM05D003705 ORTHO05D007730 8.9e-20 102.1 257 53.3
MSTRG.2078 Avicennia marina HOM05D003705 ORTHO05D007730 1.2e-19 101.7 176 68.8
A09p06960 Brassica napus HOM05D003705 ORTHO05D007730 3.4e-19 100.1 257 55.3
BraA09t36344Z Brassica rapa HOM05D003705 ORTHO05D007730 3.4e-19 100.1 257 55.3
DCAR_002613 Daucus carota HOM05D003705 ORTHO05D007730 4.4e-19 99.8 167 74.3
Gorai.012G136100 Gossypium raimondii HOM05D003705 ORTHO05D007730 4.4e-19 99.8 100 55.0
FAN07G0376 Fragaria x ananassa HOM05D003705 ORTHO05D007730 5.8e-19 99.4 249 55.8
BcaC04g23494 Brassica carinata HOM05D003705 ORTHO05D007730 7.5e-19 99.0 257 54.9
C09p07720 Brassica napus HOM05D003705 ORTHO05D007730 7.5e-19 99.0 257 54.9
BolC9t53689H Brassica oleracea HOM05D003705 ORTHO05D007730 7.5e-19 99.0 257 54.9
TAR636G0434 Trochodendron aralioides HOM05D003705 ORTHO05D007730 7.5e-19 99.0 176 69.9
Dinv02933 Davidia involucrata HOM05D003705 ORTHO05D007730 9.9e-19 98.6 134 47.0
FvH4_4g37290 Fragaria vesca HOM05D003705 ORTHO05D007730 2.9e-18 97.1 160 74.4
FAN17G0997 Fragaria x ananassa HOM05D003705 ORTHO05D007730 6.4e-18 95.9 249 55.4
TWI53G0779 Tripterygium wilfordii HOM05D003705 ORTHO05D007730 8.3e-18 95.5 141 82.3
Gohir.D04G149600 Gossypium hirsutum HOM05D003705 ORTHO05D007730 1.1e-17 95.1 176 70.5
Gohir.A04G109488 Gossypium hirsutum HOM05D003705 ORTHO05D007730 7.1e-17 92.4 176 69.3
Nitab4.5_0007445g0060 Nicotiana tabacum HOM05D003705 ORTHO05D007730 7.1e-17 92.4 145 79.3
RcHm_v2.0_Chr4g0447111 Rosa chinensis HOM05D003705 ORTHO05D007730 7.1e-17 92.4 249 55.0
BcaB04g19870 Brassica carinata HOM05D003705 ORTHO05D007730 6.0e-16 89.4 257 53.3
Nitab4.5_0002707g0050 Nicotiana tabacum HOM05D003705 ORTHO05D007730 6.0e-16 89.4 145 77.9
Oeu017056.1 Olea europaea HOM05D003705 ORTHO05D007730 1.0e-15 88.6 144 79.9
Peaxi162Scf00329g10011 Petunia axillaris HOM05D003705 ORTHO05D007730 1.3e-15 88.2 141 77.3
MELO3C011763.2 Cucumis melo HOM05D003705 ORTHO05D007730 8.6e-15 85.5 143 77.6
EL10Ac6g15595 Beta vulgaris HOM05D003705 ORTHO05D007730 1.1e-14 85.1 141 79.4
Atru.chr11.62 Acer truncatum HOM05D003705 ORTHO05D007730 1.9e-14 84.3 135 83.0
Cc11_g04520 Coffea canephora HOM05D003705 ORTHO05D007730 4.3e-14 83.2 62 66.1
Duzib248G0348 Durio zibethinus HOM05D003705 ORTHO05D007730 1.2e-13 81.6 132 84.1
AUR62032905 Chenopodium quinoa HOM05D003705 ORTHO05D007730 2.8e-13 80.5 141 77.3
Cpa.g.sc247.2 Carica papaya HOM05D003705 ORTHO05D007730 4.7e-13 79.7 134 80.6
COL.COLO4_33134 Corchorus olitorius HOM05D003705 ORTHO05D007730 4.7e-13 79.7 130 84.6
THA.LOC104800622 Tarenaya hassleriana HOM05D003705 ORTHO05D007730 6.2e-13 79.3 257 51.4
CiPaw.15G001000 Carya illinoinensis HOM05D003705 ORTHO05D007730 8.1e-13 79.0 141 77.3
Cfa018676 Carpinus fangiana HOM05D003705 ORTHO05D007730 4.0e-12 76.6 134 79.9
CsaV3_5G029110 Cucumis sativus L. HOM05D003705 ORTHO05D007730 1.5e-11 74.7 143 75.5
Duzib132G0369 Durio zibethinus HOM05D003705 ORTHO05D007730 1.5e-11 74.7 130 82.3
AUR62007539 Chenopodium quinoa HOM05D003705 ORTHO05D007730 2.0e-11 74.3 137 76.6
Ciclev10014664m.g Citrus clementina HOM05D003705 ORTHO05D007730 3.4e-11 73.6 133 79.7
Cc00_g34130 Coffea canephora HOM05D003705 ORTHO05D007730 3.4e-11 73.6 176 63.1
AUR62004031 Chenopodium quinoa HOM05D003705 ORTHO05D007730 2.2e-10 70.9 176 63.1
PSO782G1796 Papaver somniferum HOM05D003705 ORTHO05D007730 3.8e-10 70.1 221 54.8
GSVIVG01034362001 Vitis vinifera HOM05D003705 ORTHO05D007730 3.8e-10 70.1 177 66.1
PSO063G7530 Papaver somniferum HOM05D003705 ORTHO05D007730 4.9e-10 69.7 221 54.8
SalBow2G0672 Salvia bowleyana HOM05D003705 ORTHO05D007730 1.9e-09 67.8 176 63.1
CANSAT78G0563 Cannabis sativa HOM05D003705 ORTHO05D007730 4.1e-09 66.6 136 74.3
Haze_17404 Corylus avellana HOM05D003705 ORTHO05D007730 5.4e-09 66.2 138 75.4
QL01p000462 Quercus lobata HOM05D003705 ORTHO05D007730 7.1e-09 65.9 140 74.3
QL01p000551 Quercus lobata HOM05D003705 ORTHO05D007730 7.1e-09 65.9 140 74.3
CAN.G419.8 Capsicum annuum HOM05D003705 ORTHO05D007730 1.6e-08 64.7 136 75.7
Gohir.A13G062600 Gossypium hirsutum HOM05D003705 ORTHO05D007730 1.6e-08 64.7 136 77.2
Gorai.013G067100 Gossypium raimondii HOM05D003705 ORTHO05D007730 1.6e-08 64.7 136 77.2
Manes.04G161700 Manihot esculenta HOM05D003705 ORTHO05D007730 4.6e-08 63.2 137 74.5
Gohir.D13G059300 Gossypium hirsutum HOM05D003705 ORTHO05D007730 6.0e-08 62.8 136 76.5
Potri.007G001000 Populus trichocarpa HOM05D003705 ORTHO05D007730 7.8e-08 62.4 143 72.0
AUR62017748 Chenopodium quinoa HOM05D003705 ORTHO05D007730 1.3e-07 61.6 141 73.0
Solyc04g008830.1 Solanum lycopersicum HOM05D003705 ORTHO05D007730 1.3e-07 61.6 138 72.5
Sopen04g004010 Solanum pennellii HOM05D003705 ORTHO05D007730 1.3e-07 61.6 138 72.5
GSVIVG01001407001 Vitis vinifera HOM05D000053 ORTHO05D000035 3.9e-07 60.1 112 33.9
PGR044G0096 Punica granatum HOM05D003705 ORTHO05D007730 5.1e-07 59.7 176 60.8
TPR.G10147 Trifolium pratense HOM05D000071 ORTHO05D000029 8.6e-07 58.9 74 43.2
Rhsim10G0009400 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.5e-06 58.2 103 35.0
CSS0015770 Camellia sinensis var. sinensis HOM05D003705 ORTHO05D007730 1.9e-06 57.8 136 72.8
CSS0050258 Camellia sinensis var. sinensis HOM05D003705 ORTHO05D007730 1.9e-06 57.8 136 72.8
PGSC0003DMG400025295 Solanum tuberosum HOM05D003705 ORTHO05D007730 1.9e-06 57.8 136 72.1
HPP92_005410 Vanilla planifolia HOM05D003705 ORTHO05D007730 1.9e-06 57.8 176 60.2
Mapoly0106s0043 Marchantia polymorpha HOM05D000033 ORTHO05D001614 3.3e-06 57.0 112 33.0
Psat3g129920 Pisum sativum HOM05D003705 ORTHO05D007730 4.3e-06 56.6 101 40.6
Rhsim10G0009200 Rhododendron simsii HOM05D000071 ORTHO05D000029 4.3e-06 56.6 101 32.7
Carub.0001s2545 Capsella rubella HOM05D000517 ORTHO05D000751 5.6e-06 56.2 94 38.3
Thhalv10020162m.g Eutrema salsugineum HOM05D000570 ORTHO05D001174 7.3e-06 55.8 109 40.4
MD13G1001800 Malus domestica HOM05D003705 ORTHO05D007730 7.3e-06 55.8 134 71.6
Sed0025699 Sechium edule HOM05D003705 ORTHO05D007730 7.3e-06 55.8 137 68.6


User provided reference genes

Program Settings