Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p06060 Brassica napus HOM05D000885 ORTHO05D032602 4.9e-55 217.6 114 100.0
BolC9t53532H Brassica oleracea HOM05D000885 ORTHO05D032602 1.2e-34 149.8 87 92.0
BcaC04g23661 Brassica carinata HOM05D000885 ORTHO05D032602 2.9e-23 112.1 63 92.1
CARHR186550 Cardamine hirsuta HOM05D000885 ORTHO05D001238 4.3e-19 98.2 75 74.7
Thhalv10004901m.g Eutrema salsugineum HOM05D000885 ORTHO05D001238 4.3e-19 98.2 75 78.7
AT5G26990 Arabidopsis thaliana HOM05D000885 ORTHO05D001238 9.6e-19 97.1 86 67.4
Carub.0006s2461 Capsella rubella HOM05D000885 ORTHO05D001238 9.6e-19 97.1 89 66.3
A06p37120 Brassica napus HOM05D000885 ORTHO05D001238 1.3e-18 96.7 91 65.9
BraA06t26638Z Brassica rapa HOM05D000885 ORTHO05D001238 1.3e-18 96.7 91 65.9
Sp2g21060 Schrenkiella parvula HOM05D000885 ORTHO05D001238 9.0e-17 90.5 75 72.0
C07p41310 Brassica napus HOM05D000885 ORTHO05D001238 1.2e-16 90.1 91 63.7
BolC7t44659H Brassica oleracea HOM05D000885 ORTHO05D001238 1.2e-16 90.1 91 63.7
A02p38910 Brassica napus HOM05D000885 ORTHO05D001238 4.5e-16 88.2 91 62.6
C02p58490 Brassica napus HOM05D000885 ORTHO05D001238 4.5e-16 88.2 91 63.7
BraA02t08864Z Brassica rapa HOM05D000885 ORTHO05D001238 4.5e-16 88.2 91 62.6
BolC2t11910H Brassica oleracea HOM05D000885 ORTHO05D001238 1.3e-15 86.7 91 62.6
A02p38890 Brassica napus HOM05D000885 ORTHO05D001238 1.4e-14 83.2 75 68.0
AL6G38920 Arabidopsis lyrata HOM05D000885 ORTHO05D001238 3.2e-14 82.0 86 62.8
Aa31LG11G9720 Aethionema arabicum HOM05D000885 ORTHO05D001238 3.9e-12 75.1 75 62.7
Aa31LG11G9730 Aethionema arabicum HOM05D000885 ORTHO05D001238 3.9e-12 75.1 75 62.7
THA.LOC104802781 Tarenaya hassleriana HOM05D000885 ORTHO05D001238 3.6e-10 68.6 75 58.7
A09p05570 Brassica napus HOM05D000885 ORTHO05D001238 4.8e-10 68.2 91 52.7
THA.LOC104821733 Tarenaya hassleriana HOM05D000885 ORTHO05D001238 3.1e-09 65.5 75 56.0
CARHR080150 Cardamine hirsuta HOM05D000885 ORTHO05D001238 4.0e-09 65.1 83 53.0
BraA09t36198Z Brassica rapa HOM05D000885 ORTHO05D001238 5.3e-09 64.7 35 91.4
AL3G16390 Arabidopsis lyrata HOM05D000885 ORTHO05D001238 6.9e-09 64.3 83 53.0
AL88U10030 Arabidopsis lyrata HOM05D000885 ORTHO05D001238 6.9e-09 64.3 83 53.0
Thhalv10021933m.g Eutrema salsugineum HOM05D000885 ORTHO05D001238 1.2e-08 63.5 83 51.8
Sp3g04580 Schrenkiella parvula HOM05D000885 ORTHO05D001238 3.4e-08 62.0 81 53.1
Aa31LG5G16120 Aethionema arabicum HOM05D000885 ORTHO05D001238 2.2e-07 59.3 91 47.3
Carub.0003s0505 Capsella rubella HOM05D000885 ORTHO05D001238 4.9e-07 58.2 83 50.6
Lj5g0005519 Lotus japonicus HOM05D000885 ORTHO05D001238 7.1e-06 54.3 90 45.6


User provided reference genes

Program Settings