Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p05760 Brassica napus HOM05D004239 ORTHO05D005191 5.0e-216 754.2 393 100.0
BcaC04g23678 Brassica carinata HOM05D004239 ORTHO05D005191 1.2e-206 723.0 393 96.4
BolC9t53503H Brassica oleracea HOM05D004239 ORTHO05D005191 1.2e-206 723.0 393 96.4
A09p05280 Brassica napus HOM05D004239 ORTHO05D005191 2.1e-198 695.7 383 96.1
BraA09t36167Z Brassica rapa HOM05D004239 ORTHO05D005191 2.3e-197 692.2 383 96.3
BcaB04g19671 Brassica carinata HOM05D004239 ORTHO05D005191 2.4e-194 682.2 384 94.5
Thhalv10004396m.g Eutrema salsugineum HOM05D004239 ORTHO05D005191 9.5e-191 670.2 383 92.7
Sp2g20670 Schrenkiella parvula HOM05D004239 ORTHO05D005191 2.2e-187 659.1 382 91.6
A02p38630 Brassica napus HOM05D004239 ORTHO05D005191 5.0e-184 647.9 387 89.1
BolC2t11880H Brassica oleracea HOM05D004239 ORTHO05D005191 2.5e-183 645.6 390 88.5
BraA02t08839Z Brassica rapa HOM05D004239 ORTHO05D005191 4.7e-182 641.3 383 89.3
C02p58120 Brassica napus HOM05D004239 ORTHO05D005191 1.4e-181 639.8 390 87.9
Carub.0006s2508 Capsella rubella HOM05D004239 ORTHO05D005191 6.8e-181 637.5 383 87.5
AT5G27450 Arabidopsis thaliana HOM05D004239 ORTHO05D005191 7.5e-180 634.0 383 87.5
AL6G39560 Arabidopsis lyrata HOM05D004239 ORTHO05D005191 1.3e-179 633.3 383 87.2
CARHR186060 Cardamine hirsuta HOM05D004239 ORTHO05D005191 8.9e-173 610.5 383 84.3
BcaC03g17788 Brassica carinata HOM05D004239 ORTHO05D005191 1.2e-169 600.1 383 85.4
Aa31LG11G9210 Aethionema arabicum HOM05D004239 ORTHO05D005191 1.4e-162 576.6 387 78.8
THA.LOC104802807 Tarenaya hassleriana HOM05D004239 ORTHO05D005191 1.8e-157 559.7 389 76.9
QL03p006503 Quercus lobata HOM05D004239 ORTHO05D005191 1.1e-149 533.9 385 73.0
CiPaw.07G016500 Carya illinoinensis HOM05D004239 ORTHO05D005191 1.4e-149 533.5 385 73.2
Manes.09G165700 Manihot esculenta HOM05D004239 ORTHO05D005191 2.4e-146 522.7 384 71.4
Cfa006576 Carpinus fangiana HOM05D004239 ORTHO05D005191 5.4e-146 521.5 385 70.4
Potri.005G035300 Populus trichocarpa HOM05D004239 ORTHO05D005191 9.3e-146 520.8 385 70.4
Oeu038249.1 Olea europaea HOM05D004239 ORTHO05D005191 1.6e-145 520.0 386 71.0
Cpa.g.sc48.35 Carica papaya HOM05D004239 ORTHO05D005191 6.0e-145 518.1 385 70.6
Manes.08G122300 Manihot esculenta HOM05D004239 ORTHO05D005191 7.8e-145 517.7 385 70.4
Haze_04207 Corylus avellana HOM05D004239 ORTHO05D005191 1.7e-144 516.5 385 70.4
Potri.013G024000 Populus trichocarpa HOM05D004239 ORTHO05D005191 1.7e-144 516.5 385 70.4
Dinv40275 Davidia involucrata HOM05D004239 ORTHO05D005191 2.3e-144 516.2 385 70.9
Oeu027738.1 Olea europaea HOM05D004239 ORTHO05D005191 3.0e-144 515.8 385 69.4
Peaxi162Scf00037g00226 Petunia axillaris HOM05D004239 ORTHO05D005191 3.0e-144 515.8 390 69.7
Prupe.6G327600 Prunus persica HOM05D004239 ORTHO05D005191 3.9e-144 515.4 386 70.7
CANSAT54G0620 Cannabis sativa HOM05D004239 ORTHO05D005191 8.7e-144 514.2 383 71.8
Nitab4.5_0005388g0060 Nicotiana tabacum HOM05D004239 ORTHO05D005191 8.7e-144 514.2 384 70.6
MD12G1220700 Malus domestica HOM05D004239 ORTHO05D005191 5.6e-143 511.5 386 71.0
Sopen01g042380 Solanum pennellii HOM05D004239 ORTHO05D005191 5.6e-143 511.5 384 70.1
Cc00_g15600 Coffea canephora HOM05D004239 ORTHO05D005191 9.6e-143 510.8 385 70.4
Eucgr.B01993 Eucalyptus grandis HOM05D004239 ORTHO05D005191 6.2e-142 508.1 386 70.2
FvH4_6g05650 Fragaria vesca HOM05D004239 ORTHO05D005191 1.1e-141 507.3 385 69.6
Solyc01g098840.3 Solanum lycopersicum HOM05D004239 ORTHO05D005191 1.1e-141 507.3 384 69.3
MSTRG.5107 Avicennia marina HOM05D004239 ORTHO05D005191 1.8e-141 506.5 385 69.6
TWI12G0310 Tripterygium wilfordii HOM05D004239 ORTHO05D005191 1.8e-141 506.5 385 69.1
Phvul.006G092900 Phaseolus vulgaris HOM05D004239 ORTHO05D005191 2.4e-141 506.1 385 69.6
PGSC0003DMG401028586 Solanum tuberosum HOM05D004239 ORTHO05D005191 3.1e-141 505.8 384 68.5
Medtr7g113660 Medicago truncatula HOM05D004239 ORTHO05D005191 6.9e-141 504.6 385 69.6
SGA_v2.0_scaffold81G26082 Striga asiatica HOM05D004239 ORTHO05D005191 6.9e-141 504.6 385 69.9
TWI36G1635 Tripterygium wilfordii HOM05D004239 ORTHO05D005191 6.9e-141 504.6 386 68.1
MD04G1206900 Malus domestica HOM05D004239 ORTHO05D005191 1.2e-140 503.8 386 70.5
CAN.G1077.21 Capsicum annuum HOM05D004239 ORTHO05D005191 1.5e-140 503.4 383 67.4
Ca_09364_v3 Cicer arietinum L. HOM05D004239 ORTHO05D005191 2.0e-140 503.1 385 68.8
RcHm_v2.0_Chr3g0454501 Rosa chinensis HOM05D004239 ORTHO05D005191 2.0e-140 503.1 385 69.6
TPR.G33198 Trifolium pratense HOM05D004239 ORTHO05D005191 1.3e-139 500.4 388 67.8
Ciclev10001383m.g Citrus clementina HOM05D004239 ORTHO05D005191 1.7e-139 500.0 379 70.4
Hund21687 Selenicereus undatus HOM05D004239 ORTHO05D005191 2.2e-139 499.6 385 67.8
GSVIVG01000037001 Vitis vinifera HOM05D004239 ORTHO05D005191 2.2e-139 499.6 386 69.2
Actinidia23624 Actinidia chinensis HOM05D004239 ORTHO05D005191 2.9e-139 499.2 385 68.6
Sabra13G0025600 Salix brachista HOM05D004239 ORTHO05D005191 2.9e-139 499.2 403 66.5
Psat3g010600 Pisum sativum HOM05D004239 ORTHO05D005191 4.9e-139 498.4 385 68.3
Glyma.03G239000 Glycine max HOM05D004239 ORTHO05D005191 1.1e-138 497.3 385 67.5
TAR636G0428 Trochodendron aralioides HOM05D004239 ORTHO05D005191 1.1e-138 497.3 385 67.8
Migut.N01997 Erythranthe guttata HOM05D004239 ORTHO05D005191 1.4e-138 496.9 385 68.6
Sed0007278 Sechium edule HOM05D004239 ORTHO05D005191 1.4e-138 496.9 384 68.2
CsaV3_2G005140 Cucumis sativus L. HOM05D004239 ORTHO05D005191 2.4e-138 496.1 384 69.5
VMungo0540G1286 Vigna mungo HOM05D004239 ORTHO05D005191 3.2e-138 495.7 383 67.9
Lalb_Chr04g0260811 Lupinus albus HOM05D004239 ORTHO05D005191 1.6e-137 493.4 385 67.3
MELO3C004278.2 Cucumis melo HOM05D004239 ORTHO05D005191 2.1e-137 493.0 384 69.3
EL10Ac4g09340 Beta vulgaris HOM05D004239 ORTHO05D005191 2.7e-137 492.7 384 68.0
AUR62005132 Chenopodium quinoa HOM05D004239 ORTHO05D005191 2.7e-137 492.7 385 68.1
Rhsim05G0142700 Rhododendron simsii HOM05D004239 ORTHO05D005191 2.7e-137 492.7 386 67.9
Nitab4.5_0009323g0010 Nicotiana tabacum HOM05D004239 ORTHO05D005191 4.6e-137 491.9 385 68.1
PSO063G4628 Papaver somniferum HOM05D004239 ORTHO05D005191 4.6e-137 491.9 385 67.5
ClCG02G015900 Citrullus lanatus HOM05D004239 ORTHO05D005191 1.0e-136 490.7 384 69.0
SalBow3G0110 Salvia bowleyana HOM05D004239 ORTHO05D005191 1.8e-136 490.0 385 68.6
Sed0006954 Sechium edule HOM05D004239 ORTHO05D005191 1.8e-136 490.0 384 68.0
vmacro19629 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 1.8e-136 490.0 386 67.6
Aqoxy2G03302 Aquilegia oxysepala HOM05D004239 ORTHO05D005191 1.5e-135 486.9 385 66.5
Nn4g26228 Nelumbo nucifera HOM05D004239 ORTHO05D005191 5.6e-135 485.0 389 66.1
arahy.Tifrunner.gnm1.ann1.VWT09S Arachis hypogaea HOM05D004239 ORTHO05D005191 7.4e-135 484.6 387 67.4
vmacro23128 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 2.1e-134 483.0 385 66.8
unitig_0.g2376 Utricularia gibba HOM05D004239 ORTHO05D005191 2.8e-134 482.6 385 67.5
Peaxi162Scf00471g00018 Petunia axillaris HOM05D004239 ORTHO05D005191 6.2e-134 481.5 385 67.3
AUR62000841 Chenopodium quinoa HOM05D004239 ORTHO05D005191 1.1e-133 480.7 398 65.1
ECA234G2741 Erigeron canadensis HOM05D004239 ORTHO05D005191 1.8e-133 479.9 385 66.0
FAN14G2823 Fragaria x ananassa HOM05D004239 ORTHO05D005191 3.1e-133 479.2 385 67.3
DCAR_029425 Daucus carota HOM05D004239 ORTHO05D005191 1.5e-132 476.9 385 65.5
Nn1g02198 Nelumbo nucifera HOM05D004239 ORTHO05D005191 1.5e-132 476.9 386 65.3
Lsat_1_v5_gn_4_139401 Lactuca sativa HOM05D004239 ORTHO05D005191 7.6e-132 474.6 384 65.4
FAN05G5256 Fragaria x ananassa HOM05D004239 ORTHO05D005191 9.9e-132 474.2 385 66.5
Lj9A25G19 Lonicera japonica HOM05D004239 ORTHO05D005191 1.3e-131 473.8 387 65.4
Lj9A26G17 Lonicera japonica HOM05D004239 ORTHO05D005191 1.3e-131 473.8 387 65.4
arahy.Tifrunner.gnm1.ann1.5NK7V3 Arachis hypogaea HOM05D004239 ORTHO05D005191 2.2e-131 473.0 411 64.0
PGR083G1755 Punica granatum HOM05D004239 ORTHO05D005191 2.2e-131 473.0 384 66.1
Duzib106G0174 Durio zibethinus HOM05D004239 ORTHO05D005191 1.2e-129 467.2 386 63.5
CSS0041428 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 7.9e-129 464.5 386 66.3
FAN14G1612 Fragaria x ananassa HOM05D004239 ORTHO05D005191 3.0e-128 462.6 417 62.1
FAN02G3565 Fragaria x ananassa HOM05D004239 ORTHO05D005191 3.9e-128 462.2 417 62.4
Gohir.A11G295900 Gossypium hirsutum HOM05D004239 ORTHO05D005191 8.7e-128 461.1 385 63.6
Dinv23953 Davidia involucrata HOM05D004239 ORTHO05D005191 1.1e-127 460.7 352 69.0
FAN09G3705 Fragaria x ananassa HOM05D004239 ORTHO05D005191 2.5e-127 459.5 417 62.1
Gohir.D11G311000 Gossypium hirsutum HOM05D004239 ORTHO05D005191 5.6e-127 458.4 385 63.4
FAN05G0638 Fragaria x ananassa HOM05D004239 ORTHO05D005191 1.3e-126 457.2 418 61.2
Gorai.007G342800 Gossypium raimondii HOM05D004239 ORTHO05D005191 1.6e-126 456.8 385 63.4
HanXRQChr09g0259671 Helianthus annuus HOM05D004239 ORTHO05D005191 4.8e-126 455.3 385 63.4
Thecc.05G305000 Theobroma cacao HOM05D004239 ORTHO05D005191 6.9e-125 451.4 385 62.3
Lj1g0017751 Lotus japonicus HOM05D004239 ORTHO05D005191 2.0e-124 449.9 351 67.8
Sc09g0003220 Simmondsia chinensis HOM05D004239 ORTHO05D005191 4.5e-124 448.7 350 68.0
TAR365G0701 Trochodendron aralioides HOM05D004239 ORTHO05D005191 1.7e-123 446.8 350 68.3
ATR0561G047 Amborella trichopoda HOM05D004239 ORTHO05D005191 3.5e-121 439.1 385 60.5
Zm00001eb209270 Zea mays HOM05D004239 ORTHO05D005191 1.1e-117 427.6 389 57.6
ClCG10G005450 Citrullus lanatus HOM05D004239 ORTHO05D005191 1.8e-117 426.8 385 62.6
Glyma.19G236200 Glycine max HOM05D004239 ORTHO05D005191 2.0e-116 423.3 330 66.7
Os10g0329300 Oryza sativa ssp. japonica HOM05D004239 ORTHO05D005191 7.6e-116 421.4 389 59.1
Actinidia19795 Actinidia chinensis HOM05D004239 ORTHO05D005191 1.7e-115 420.2 339 64.9
Zm00001eb209470 Zea mays HOM05D004239 ORTHO05D005191 2.2e-115 419.9 378 58.7
SEGI_00819 Sequoiadendron giganteum HOM05D004239 ORTHO05D005191 1.0e-112 411.0 393 55.0
Sed0017775 Sechium edule HOM05D004239 ORTHO05D005191 2.2e-110 403.3 399 59.4
Lsat_1_v5_gn_2_64361 Lactuca sativa HOM05D004239 ORTHO05D005191 8.2e-110 401.4 399 56.1
Nitab4.5_0002031g0070 Nicotiana tabacum HOM05D004239 ORTHO05D005191 4.5e-108 395.6 381 56.7
Gorai.007G296000 Gossypium raimondii HOM05D004239 ORTHO05D005191 1.4e-106 390.6 383 58.0
SHI18197 Sapria himalayana HOM05D004239 ORTHO05D005191 3.6e-105 386.0 393 54.2
Gohir.D11G274300 Gossypium hirsutum HOM05D004239 ORTHO05D005191 3.4e-100 369.4 383 56.7
CDE02G3721 Ceratophyllum demersum HOM05D004239 ORTHO05D005191 4.2e-98 362.5 294 61.6
MELO3C004281.2 Cucumis melo HOM05D004239 ORTHO05D005191 1.8e-93 347.1 272 68.8
Pp3c22_490 Physcomitrium patens HOM05D004239 ORTHO05D005191 4.5e-92 342.4 420 46.4
Mapoly0214s0007 Marchantia polymorpha HOM05D004239 ORTHO05D005191 9.4e-82 308.1 436 42.0
AagrBONN_evm.TU.Sc2ySwM_368.2263 Anthoceros agrestis HOM05D004239 ORTHO05D005191 5.7e-79 298.9 375 45.6
HPP92_020860 Vanilla planifolia HOM05D004239 ORTHO05D005191 3.8e-75 286.2 266 58.6
RcHm_v2.0_Chr7g0220931 Rosa chinensis HOM05D004239 ORTHO05D005191 8.0e-73 278.5 301 55.8
Actinidia05711 Actinidia chinensis HOM05D004239 ORTHO05D005191 2.3e-72 276.9 223 66.8
SMO347G0436 Selaginella moellendorffii HOM05D004239 ORTHO05D005191 7.0e-69 265.4 387 40.1
CBR_g3053 Chara braunii HOM05D004239 ORTHO05D005191 1.6e-60 237.7 464 36.4
CSS0049885 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 1.3e-51 208.0 164 68.3
SMO167G0025 Selaginella moellendorffii HOM05D004239 ORTHO05D005191 9.5e-50 201.8 238 45.0
Nitab4.5_0000327g0030 Nicotiana tabacum HOM05D004239 ORTHO05D005191 1.9e-45 187.6 142 70.4
Cfa007056 Carpinus fangiana HOM05D004239 ORTHO05D005191 1.1e-42 178.3 149 67.8
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 1.3e-35 154.8 388 30.7
RcHm_v2.0_Chr3g0454481 Rosa chinensis HOM05D004239 ORTHO05D005191 2.5e-34 150.6 123 65.9
vmacro05023 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 1.1e-32 145.2 177 53.1
Zm00001eb063950 Zea mays HOM05D004239 ORTHO05D005191 8.4e-30 135.6 166 47.6
RcHm_v2.0_Chr7g0220941 Rosa chinensis HOM05D004239 ORTHO05D005191 4.3e-26 123.2 84 71.4
COL.COLO4_16926 Corchorus olitorius HOM05D004239 ORTHO05D005191 9.6e-26 122.1 108 58.3
Lj5A557G19 Lonicera japonica HOM05D004239 ORTHO05D005191 1.3e-25 121.7 149 49.7
AagrBONN_evm.TU.Sc2ySwM_117.3520 Anthoceros agrestis HOM05D004239 ORTHO05D005191 1.4e-24 118.2 213 35.7
Lj5A557T20 Lonicera japonica HOM05D004239 ORTHO05D005191 5.3e-24 116.3 155 47.1
Lj5A555G9 Lonicera japonica HOM05D004239 ORTHO05D005191 8.4e-22 109.0 136 50.0
Actinidia05710 Actinidia chinensis HOM05D004239 ORTHO05D005191 1.9e-21 107.8 74 68.9
Lj5A556G14 Lonicera japonica HOM05D004239 ORTHO05D005191 1.6e-20 104.8 120 52.5
Lsat_1_v5_gn_7_76161 Lactuca sativa HOM05D004239 ORTHO05D005191 8.1e-17 92.4 69 63.8
Lj5A549T14 Lonicera japonica HOM05D004239 ORTHO05D005191 1.1e-16 92.0 129 48.1
Lj5A558T15 Lonicera japonica HOM05D004239 ORTHO05D005191 4.0e-16 90.1 86 53.5
Lj5A558T16 Lonicera japonica HOM05D004239 ORTHO05D005191 1.2e-15 88.6 129 47.3
Lj5A552G14 Lonicera japonica HOM05D004239 ORTHO05D005191 4.5e-15 86.7 85 54.1
Zm00001eb252600 Zea mays HOM05D004239 ORTHO05D005191 8.4e-14 82.4 106 49.1
Zm00001eb193770 Zea mays HOM05D004239 ORTHO05D445176 1.1e-13 82.0 92 43.5
Zm00001eb313220 Zea mays HOM05D004239 ORTHO05D005191 1.1e-13 82.0 94 53.2
Lj5A550T6 Lonicera japonica HOM05D004239 ORTHO05D005191 1.2e-12 78.6 127 43.3
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 1.3e-11 75.1 45 84.4
COL.COLO4_16925 Corchorus olitorius HOM05D004239 ORTHO05D005191 2.5e-10 70.9 47 68.1
Oeu038248.1 Olea europaea HOM05D004239 ORTHO05D288322 3.3e-10 70.5 42 85.7
RcHm_v2.0_Chr3g0454471 Rosa chinensis HOM05D004239 ORTHO05D005191 9.0e-08 62.4 36 83.3
Zm00001eb342830 Zea mays HOM05D004239 ORTHO05D005191 9.0e-08 62.4 40 80.0
arahy.Tifrunner.gnm1.ann1.04YHM3 Arachis hypogaea HOM05D004239 ORTHO05D005191 1.2e-07 62.0 102 44.1
Zm00001eb019540 Zea mays HOM05D000931 ORTHO05D001924 5.8e-07 59.7 40 75.0
Zm00001eb406200 Zea mays HOM05D004239 ORTHO05D005191 1.7e-06 58.2 86 45.3
Potri.015G125201 Populus trichocarpa HOM05D004239 ORTHO05D005191 4.9e-06 56.6 49 51.0


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