Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p05640 Brassica napus HOM05D008387 ORTHO05D010446 3.7e-255 884.4 455 100.0
BolC9t53492H Brassica oleracea HOM05D008387 ORTHO05D010446 2.3e-241 838.6 461 95.4
BcaC04g23695 Brassica carinata HOM05D008387 ORTHO05D010446 2.3e-140 503.1 373 76.4
A09p05190 Brassica napus HOM05D008387 ORTHO05D010446 4.5e-112 409.1 371 66.6
C09p05620 Brassica napus HOM05D008387 ORTHO05D010446 1.0e-111 407.9 370 65.1
A09p05180 Brassica napus HOM05D008387 ORTHO05D010446 2.9e-111 406.4 384 62.8
BolC9t53490H Brassica oleracea HOM05D008387 ORTHO05D010446 2.5e-110 403.3 371 64.7
C09p05610 Brassica napus HOM05D008387 ORTHO05D010446 3.6e-109 399.4 380 61.8
BraA09t36157Z Brassica rapa HOM05D008387 ORTHO05D010446 8.0e-109 398.3 377 63.1
BcaC04g23696 Brassica carinata HOM05D008387 ORTHO05D010446 1.0e-108 397.9 380 61.6
BolC9t53489H Brassica oleracea HOM05D008387 ORTHO05D010446 4.0e-108 396.0 375 62.4
BcaB04g19657 Brassica carinata HOM05D008387 ORTHO05D010446 1.1e-94 351.3 400 55.2
Thhalv10003597m.g Eutrema salsugineum HOM05D008387 ORTHO05D010446 7.8e-88 328.6 398 53.8
BcaB04g19656 Brassica carinata HOM05D008387 ORTHO05D010446 1.9e-86 323.9 391 56.3
BcaC04g23553 Brassica carinata HOM05D008387 ORTHO05D010446 8.1e-85 318.5 321 62.3
Sp2g20470 Schrenkiella parvula HOM05D008387 ORTHO05D010446 2.9e-82 310.1 398 50.8
AL6G39870 Arabidopsis lyrata HOM05D008387 ORTHO05D010446 2.7e-80 303.5 392 50.3
C07p40540 Brassica napus HOM05D008387 ORTHO05D010446 2.7e-80 303.5 411 49.1
BolC7t44591H Brassica oleracea HOM05D008387 ORTHO05D010446 2.7e-80 303.5 411 49.1
A06p37680 Brassica napus HOM05D008387 ORTHO05D010446 2.8e-77 293.5 404 49.0
BraA06t26688Z Brassica rapa HOM05D008387 ORTHO05D010446 2.8e-77 293.5 404 49.0
AT5G27220 Arabidopsis thaliana HOM05D008387 ORTHO05D010446 2.4e-73 280.4 387 48.6
Carub.0006s2529 Capsella rubella HOM05D008387 ORTHO05D010446 1.5e-62 244.6 414 43.7
CARHR185830 Cardamine hirsuta HOM05D008387 ORTHO05D010446 1.6e-53 214.5 384 42.2
Aa31LG11G8960 Aethionema arabicum HOM05D008387 ORTHO05D010446 3.8e-42 176.8 360 38.6
Aa31LG11G9020 Aethionema arabicum HOM05D008387 ORTHO05D010446 5.5e-41 172.9 372 38.7
C03p10830 Brassica napus HOM05D004375 ORTHO05D008558 5.1e-31 139.8 108 61.1
BolC9t53488H Brassica oleracea HOM05D008387 ORTHO05D010446 6.5e-26 122.9 116 63.8
Aa31LG11G8970 Aethionema arabicum HOM05D008387 ORTHO05D010446 2.1e-24 117.9 234 35.0
Aa31LG5G15460 Aethionema arabicum HOM05D008387 ORTHO05D010446 6.1e-24 116.3 295 32.2
BcaC09g50012 Brassica carinata HOM05D004375 ORTHO05D016090 6.7e-23 112.8 107 53.3
BolC1t02944H Brassica oleracea HOM05D004375 ORTHO05D016090 6.7e-23 112.8 107 53.3
BraA01t02895Z Brassica rapa HOM05D029054 ORTHO05D024058 8.8e-23 112.5 107 56.1
BcaC04g20539 Brassica carinata HOM05D030300 ORTHO05D032481 2.6e-22 110.9 107 52.3
Carub.0003s0421 Capsella rubella HOM05D008387 ORTHO05D010446 2.4e-20 104.4 159 40.3
AL294U10020 Arabidopsis lyrata HOM05D000160 ORTHO05D010446 1.3e-18 98.6 241 32.0
BcaC04g23067 Brassica carinata HOM05D004375 ORTHO05D008558 8.5e-18 95.9 129 38.0
THA.LOC104818665 Tarenaya hassleriana HOM05D008387 ORTHO05D010446 3.2e-17 94.0 315 31.4
C05p62280 Brassica napus HOM05D008387 ORTHO05D010446 4.2e-17 93.6 136 43.4
BolC9t56012H Brassica oleracea HOM05D004375 ORTHO05D008558 1.2e-16 92.0 136 36.0
BolC5t34883H Brassica oleracea HOM05D008387 ORTHO05D010446 2.1e-16 91.3 133 42.9
BcaC03g15251 Brassica carinata HOM05D004375 ORTHO05D008558 2.7e-16 90.9 98 44.9
BcaC03g15252 Brassica carinata HOM05D004375 ORTHO05D008558 2.7e-16 90.9 98 44.9
C01p25790 Brassica napus HOM05D004375 ORTHO05D008558 2.7e-16 90.9 98 44.9
C07p19300 Brassica napus HOM05D004375 ORTHO05D008558 2.7e-16 90.9 98 44.9
BraA05t22993Z Brassica rapa HOM05D000160 ORTHO05D010446 2.7e-16 90.9 136 42.6
BcaC03g14687 Brassica carinata HOM05D004375 ORTHO05D008558 4.7e-16 90.1 98 44.9
A05p42600 Brassica napus HOM05D000160 ORTHO05D010446 4.7e-16 90.1 128 43.0
BolC2t08885H Brassica oleracea HOM05D004375 ORTHO05D008558 4.7e-16 90.1 98 44.9
C09p31570 Brassica napus HOM05D004375 ORTHO05D008558 6.1e-16 89.7 108 40.7
C02p27860 Brassica napus HOM05D004375 ORTHO05D008558 8.0e-16 89.4 98 44.9
AL8G13560 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 1.0e-15 89.0 125 41.6
AL8G13590 Arabidopsis lyrata HOM05D000005 ORTHO05D010446 1.0e-15 89.0 125 41.6
BcaB03g15947 Brassica carinata HOM05D004375 ORTHO05D008558 1.4e-15 88.6 97 43.3
BcaB03g16500 Brassica carinata HOM05D004375 ORTHO05D008558 1.4e-15 88.6 96 42.7
BcaB05g23703 Brassica carinata HOM05D004375 ORTHO05D008558 1.4e-15 88.6 98 42.9
Thhalv10000910m.g Eutrema salsugineum HOM05D008387 ORTHO05D010446 1.4e-15 88.6 141 39.0
BcaB02g10241 Brassica carinata HOM05D004375 ORTHO05D008558 1.8e-15 88.2 155 34.8
BolC3t21361H Brassica oleracea HOM05D004375 ORTHO05D008558 2.3e-15 87.8 156 33.3
BcaB05g23867 Brassica carinata HOM05D004375 ORTHO05D008558 4.0e-15 87.0 116 39.7
BcaC01g06196 Brassica carinata HOM05D004375 ORTHO05D008558 4.0e-15 87.0 98 43.9
BcaB01g04420 Brassica carinata HOM05D004375 ORTHO05D008558 8.8e-15 85.9 96 42.7
BcaB01g03503 Brassica carinata HOM05D004375 ORTHO05D008558 1.2e-14 85.5 158 33.5
BcaC03g14060 Brassica carinata HOM05D004375 ORTHO05D024058 1.2e-14 85.5 107 46.7
BcaB05g23011 Brassica carinata HOM05D004375 ORTHO05D008558 2.0e-14 84.7 98 41.8
BcaB07g33031 Brassica carinata HOM05D004375 ORTHO05D008558 2.6e-14 84.3 96 41.7
BcaB06g26290 Brassica carinata HOM05D004375 ORTHO05D008558 4.4e-14 83.6 200 30.5
BcaB05g21909 Brassica carinata HOM05D004375 ORTHO05D008558 9.7e-14 82.4 160 33.1
A07p43390 Brassica napus HOM05D004375 ORTHO05D008558 9.7e-14 82.4 95 44.2
C01p14320 Brassica napus HOM05D004375 ORTHO05D008558 9.7e-14 82.4 86 45.3
CARHR079300 Cardamine hirsuta HOM05D008387 ORTHO05D010446 2.8e-13 80.9 247 29.1
BolC1t02527H Brassica oleracea HOM05D004375 ORTHO05D008558 3.7e-13 80.5 84 45.2
BcaB08g35442 Brassica carinata HOM05D004375 ORTHO05D008558 4.8e-13 80.1 120 39.2
BolC2t08831H Brassica oleracea HOM05D004375 ORTHO05D008558 1.1e-12 79.0 84 45.2
BcaC06g34457 Brassica carinata HOM05D008387 ORTHO05D010446 2.4e-12 77.8 152 37.5
C07p28290 Brassica napus HOM05D008387 ORTHO05D010446 2.4e-12 77.8 152 37.5
BolC7t43370H Brassica oleracea HOM05D008387 ORTHO05D010446 2.4e-12 77.8 152 37.5
BraA09t39239Z Brassica rapa HOM05D004375 ORTHO05D008558 4.1e-12 77.0 84 41.7
C06p03140 Brassica napus HOM05D004375 ORTHO05D016039 5.3e-12 76.6 258 27.1
BolC6t35432H Brassica oleracea HOM05D004375 ORTHO05D016039 5.3e-12 76.6 258 27.1
BcaC08g43054 Brassica carinata HOM05D004375 ORTHO05D016039 1.2e-11 75.5 265 27.2
A03p67640 Brassica napus HOM05D004375 ORTHO05D008558 1.2e-11 75.5 90 41.1
Carub.0008s0289 Capsella rubella HOM05D008387 ORTHO05D010446 2.0e-11 74.7 119 39.5
Sp4g06040 Schrenkiella parvula HOM05D004375 ORTHO05D008558 2.0e-11 74.7 72 50.0
A05p24120 Brassica napus HOM05D004375 ORTHO05D016039 2.7e-11 74.3 87 41.4
A10p10570 Brassica napus HOM05D004375 ORTHO05D016039 1.7e-10 71.6 87 40.2
BcaB01g03413 Brassica carinata HOM05D004375 ORTHO05D000395 2.9e-10 70.9 84 39.3
BcaC03g15201 Brassica carinata HOM05D004375 ORTHO05D008558 6.5e-10 69.7 113 35.4
Actinidia36450 Actinidia chinensis HOM05D000702 ORTHO05D001796 4.2e-09 67.0 130 30.8
Medtr4g095080 Medicago truncatula HOM05D000439 ORTHO05D001363 4.2e-09 67.0 123 30.9
Actinidia04648 Actinidia chinensis HOM05D000439 ORTHO05D001363 7.2e-09 66.2 127 30.7
Sabra07G0045000 Salix brachista HOM05D000439 ORTHO05D001363 9.4e-09 65.9 132 31.1
Hma1.2p1_1039F.1_g250775 Hydrangea macrophylla HOM05D000439 ORTHO05D001363 2.1e-08 64.7 122 32.8
Manes.13G115800 Manihot esculenta HOM05D000439 ORTHO05D001363 4.7e-08 63.5 120 35.0
Cfa004083 Carpinus fangiana HOM05D000439 ORTHO05D001363 6.1e-08 63.2 123 30.1
Haze_15331 Corylus avellana HOM05D000439 ORTHO05D001363 6.1e-08 63.2 123 30.1
CiPaw.07G011500 Carya illinoinensis HOM05D000439 ORTHO05D002302 1.8e-07 61.6 203 26.1
CiPaw.01G008800 Carya illinoinensis HOM05D000439 ORTHO05D001363 3.0e-07 60.8 123 29.3
Gorai.007G262900 Gossypium raimondii HOM05D000439 ORTHO05D002302 4.0e-07 60.5 203 29.1
Lj3g0018169 Lotus japonicus HOM05D000439 ORTHO05D002302 5.2e-07 60.1 119 32.8
MBI16_g15950_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 5.2e-07 60.1 116 32.8
CSS0035650 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D001363 6.8e-07 59.7 114 32.5
AL3G11490 Arabidopsis lyrata HOM05D008387 ORTHO05D010446 1.5e-06 58.5 123 33.3
BcaB06g26129 Brassica carinata HOM05D004375 ORTHO05D016039 1.5e-06 58.5 257 26.1
Sc06g0006580 Simmondsia chinensis HOM05D000439 ORTHO05D001363 1.5e-06 58.5 110 31.8
Ca_20059_v3 Cicer arietinum L. HOM05D000439 ORTHO05D002302 2.0e-06 58.2 208 25.5
Gohir.D11G246820 Gossypium hirsutum HOM05D000439 ORTHO05D002302 2.0e-06 58.2 212 27.8
TWI53G2042 Tripterygium wilfordii HOM05D000439 ORTHO05D001363 2.0e-06 58.2 123 30.1
CSS0022440 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D001363 2.6e-06 57.8 115 31.3
Gohir.A11G236300 Gossypium hirsutum HOM05D000439 ORTHO05D002302 2.6e-06 57.8 203 28.6
vmacro05235 Vaccinium macrocarpon HOM05D000439 ORTHO05D001363 2.6e-06 57.8 143 29.4
Lj4g0018346 Lotus japonicus HOM05D000439 ORTHO05D002302 5.7e-06 56.6 119 31.1
BcaB02g06988 Brassica carinata HOM05D004375 ORTHO05D008558 7.5e-06 56.2 64 40.6
Duzib147G1046 Durio zibethinus HOM05D000439 ORTHO05D001363 9.8e-06 55.8 123 29.3


User provided reference genes

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