Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p03340 Brassica napus HOM05D000051 ORTHO05D000015 8.4e-41 169.9 82 100.0
Thhalv10005660m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.2e-16 88.2 80 60.0
AL5G15910 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 7.1e-16 87.0 80 60.0
BcaB04g19411 Brassica carinata HOM05D000051 ORTHO05D000015 1.8e-14 82.4 80 55.0
AT3G26930 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.0e-14 81.6 80 60.0
BcaC05g24939 Brassica carinata HOM05D000051 ORTHO05D000015 3.0e-14 81.6 80 55.0
BraA10t42602Z Brassica rapa HOM05D000051 ORTHO05D000015 3.9e-14 81.3 80 57.5
AL8G10770 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.1e-14 80.9 81 56.8
BcaC06g31035 Brassica carinata HOM05D000051 ORTHO05D000015 1.1e-13 79.7 80 52.5
BraA09t35952Z Brassica rapa HOM05D000051 ORTHO05D000015 2.5e-13 78.6 80 53.8
Thhalv10011064m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.5e-13 78.6 81 55.6
C09p03320 Brassica napus HOM05D000051 ORTHO05D000015 3.3e-13 78.2 80 53.8
A10p03260 Brassica napus HOM05D000051 ORTHO05D000015 1.3e-12 76.3 80 56.2
AL1G65610 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.6e-12 75.9 82 54.9
BolC8t50744H Brassica oleracea HOM05D000553 ORTHO05D000015 1.6e-12 75.9 80 56.2
Carub.0005s0502 Capsella rubella HOM05D000051 ORTHO05D000015 2.1e-12 75.5 82 54.9
Carub.0008s0049 Capsella rubella HOM05D000051 ORTHO05D000015 2.1e-12 75.5 80 51.2
CARHR148020 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.7e-12 74.7 81 55.6
BolC7t44117H Brassica oleracea HOM05D000051 ORTHO05D000015 4.8e-12 74.3 80 53.8
AT3G26920 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.1e-11 73.2 80 51.2
Carub.0005s0501 Capsella rubella HOM05D000051 ORTHO05D000015 1.8e-11 72.4 80 51.2
C07p36000 Brassica napus HOM05D000051 ORTHO05D000015 3.1e-11 71.6 80 48.8
Carub.0005s1791 Capsella rubella HOM05D000051 ORTHO05D000015 4.0e-11 71.2 87 51.7
AL5G28540 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.3e-11 70.9 80 51.2
AT2G04230 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.3e-11 70.9 80 50.0
BcaC06g33876 Brassica carinata HOM05D000051 ORTHO05D000015 5.3e-11 70.9 80 48.8
BolC7t44116H Brassica oleracea HOM05D000051 ORTHO05D000015 5.3e-11 70.9 80 48.8
Thhalv10010911m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.3e-11 70.9 83 49.4
AT4G13965 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.9e-11 70.5 80 51.2
AT3G49020 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.2e-10 69.7 81 50.6
BolC9t53255H Brassica oleracea HOM05D000051 ORTHO05D000015 1.2e-10 69.7 83 50.6
CARHR065210 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.2e-10 69.7 80 53.8
CARHR150860 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.2e-10 69.7 82 53.7
AT3G52690 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.5e-10 69.3 80 52.5
BraA04t17635Z Brassica rapa HOM05D000051 ORTHO05D000015 1.5e-10 69.3 81 50.6
BcaC06g31036 Brassica carinata HOM05D000051 ORTHO05D000015 2.0e-10 68.9 80 48.8
CARHR292090 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.0e-10 68.9 80 50.0
Thhalv10010427m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.0e-10 68.9 81 50.6
AL5G15900 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.6e-10 68.6 83 49.4
BolC4t25601H Brassica oleracea HOM05D000051 ORTHO05D000015 2.6e-10 68.6 80 48.8
AL5G28950 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.4e-10 68.2 80 50.0
CARHR162500 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.4e-10 68.2 85 51.8
CARHR162560 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.4e-10 68.2 81 53.1
C04p56380 Brassica napus HOM05D000051 ORTHO05D000015 4.5e-10 67.8 81 46.9
BolC4t27168H Brassica oleracea HOM05D000051 ORTHO05D000015 4.5e-10 67.8 81 46.9
Carub.0005s1908 Capsella rubella HOM05D000051 ORTHO05D000015 4.5e-10 67.8 80 55.0
BcaC05g27289 Brassica carinata HOM05D000051 ORTHO05D000015 5.8e-10 67.4 79 51.9
A04p06760 Brassica napus HOM05D000051 ORTHO05D000015 5.8e-10 67.4 80 48.8
A04p06800 Brassica napus HOM05D000051 ORTHO05D000015 5.8e-10 67.4 80 48.8
Carub.0005s1913 Capsella rubella HOM05D000051 ORTHO05D000015 5.8e-10 67.4 87 49.4
AL5G28550 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 7.6e-10 67.0 78 51.3
BcaC02g08279 Brassica carinata HOM05D000051 ORTHO05D000015 7.6e-10 67.0 81 49.4
Thhalv10009690m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.6e-10 67.0 86 52.3
Carub.0005s1521 Capsella rubella HOM05D000051 ORTHO05D000015 1.0e-09 66.6 81 48.1
Carub.0005s1522 Capsella rubella HOM05D000051 ORTHO05D000015 1.0e-09 66.6 80 48.8
A09p45740 Brassica napus HOM05D000051 ORTHO05D000015 1.3e-09 66.2 80 45.0
BraA04t16326Z Brassica rapa HOM05D000051 ORTHO05D000015 1.3e-09 66.2 80 47.5
BraA09t38919Z Brassica rapa HOM05D000051 ORTHO05D000015 1.3e-09 66.2 84 50.0
Carub.0005s1909 Capsella rubella HOM05D000051 ORTHO05D000015 1.3e-09 66.2 80 45.0
Carub.0005s0504 Capsella rubella HOM05D000051 ORTHO05D000015 1.7e-09 65.9 81 48.1
Thhalv10010336m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.7e-09 65.9 83 48.2
BcaB01g00333 Brassica carinata HOM05D000051 ORTHO05D000015 2.2e-09 65.5 82 54.9
BcaB06g28113 Brassica carinata HOM05D000051 ORTHO05D000015 2.2e-09 65.5 81 49.4
A04p20610 Brassica napus HOM05D000051 ORTHO05D000015 2.2e-09 65.5 80 48.8
AL5G31970 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.9e-09 65.1 85 48.2
AT1G55030 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.9e-09 65.1 80 53.8
AT3G49045 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.9e-09 65.1 80 46.2
C08p27960 Brassica napus HOM05D000051 ORTHO05D000015 2.9e-09 65.1 80 46.2
BolC8t50408H Brassica oleracea HOM05D000051 ORTHO05D000015 2.9e-09 65.1 80 46.2
BraA09t40034Z Brassica rapa HOM05D000051 ORTHO05D000015 2.9e-09 65.1 80 45.0
CARHR162490 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.9e-09 65.1 80 50.0
AT3G52680 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.8e-09 64.7 81 50.6
AT4G00160 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.8e-09 64.7 86 47.7
Carub.0005s1519 Capsella rubella HOM05D000051 ORTHO05D000015 3.8e-09 64.7 83 50.6
Carub.0005s1910 Capsella rubella HOM05D000051 ORTHO05D000015 3.8e-09 64.7 80 50.0
CARHR162530 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.8e-09 64.7 80 47.5
CARHR162550 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.8e-09 64.7 80 51.2
CARHR148060 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.0e-09 64.3 80 43.8
CARHR157840 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.0e-09 64.3 80 47.5
CARHR162520 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.0e-09 64.3 80 48.8
Thhalv10010364m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.0e-09 64.3 82 47.6
C06p50820 Brassica napus HOM05D000051 ORTHO05D040246 6.5e-09 63.9 78 51.3
Carub.0005s1912 Capsella rubella HOM05D000051 ORTHO05D000015 6.5e-09 63.9 79 49.4
C05p31950 Brassica napus HOM05D000051 ORTHO05D000015 8.4e-09 63.5 84 48.8
Carub.0005s1911 Capsella rubella HOM05D000051 ORTHO05D000015 8.4e-09 63.5 80 52.5
A09p33700 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-08 63.2 84 48.8
C08p31220 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-08 63.2 56 60.7
AT3G51530 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.4e-08 62.8 85 49.4
Carub.0002s0814 Capsella rubella HOM05D000051 ORTHO05D000015 1.4e-08 62.8 80 47.5
Carub.0005s1194 Capsella rubella HOM05D000051 ORTHO05D000015 1.4e-08 62.8 80 50.0
Thhalv10011042m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.4e-08 62.8 81 48.1
BcaC09g49685 Brassica carinata HOM05D000051 ORTHO05D000015 1.9e-08 62.4 78 52.6
A04p20600 Brassica napus HOM05D000051 ORTHO05D000015 1.9e-08 62.4 81 46.9
A04p34690 Brassica napus HOM05D000051 ORTHO05D000015 1.9e-08 62.4 83 45.8
BraA04t18925Z Brassica rapa HOM05D000051 ORTHO05D000015 1.9e-08 62.4 83 45.8
BcaC02g09228 Brassica carinata HOM05D000051 ORTHO05D000015 3.2e-08 61.6 80 48.8
BcaC07g39634 Brassica carinata HOM05D000051 ORTHO05D000015 3.2e-08 61.6 80 46.2
Sp4g09920 Schrenkiella parvula HOM05D000051 ORTHO05D000015 3.2e-08 61.6 81 46.9
C07p35990 Brassica napus HOM05D000051 ORTHO05D000015 4.2e-08 61.2 75 45.3
Carub.0008s0938 Capsella rubella HOM05D000051 ORTHO05D000015 4.2e-08 61.2 80 48.8
BcaC04g23545 Brassica carinata HOM05D000051 ORTHO05D000015 5.5e-08 60.8 79 49.4
A04p34730 Brassica napus HOM05D000051 ORTHO05D000015 5.5e-08 60.8 83 41.0
C09p07200 Brassica napus HOM05D000051 ORTHO05D000015 5.5e-08 60.8 79 49.4
BolC9t53633H Brassica oleracea HOM05D000051 ORTHO05D000015 5.5e-08 60.8 79 49.4
BraA04t18929Z Brassica rapa HOM05D000051 ORTHO05D000015 5.5e-08 60.8 83 41.0
Carub.0005s1915 Capsella rubella HOM05D000051 ORTHO05D000015 5.5e-08 60.8 80 48.8
A06p28020 Brassica napus HOM05D000051 ORTHO05D000015 7.1e-08 60.5 86 45.3
BraA06t25743Z Brassica rapa HOM05D000051 ORTHO05D000015 7.1e-08 60.5 86 45.3
BraA06t27088Z Brassica rapa HOM05D000051 ORTHO05D000015 9.3e-08 60.1 80 46.2
Carub.0005s0503 Capsella rubella HOM05D000051 ORTHO05D000015 9.3e-08 60.1 80 47.5
Carub.0005s0506 Capsella rubella HOM05D000051 ORTHO05D000015 1.2e-07 59.7 80 50.0
BcaC08g47164 Brassica carinata HOM05D000051 ORTHO05D000015 1.6e-07 59.3 77 50.6
C01p33950 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-07 58.9 78 51.3
BolC1t03364H Brassica oleracea HOM05D000051 ORTHO05D000015 2.1e-07 58.9 78 51.3
BcaB04g19816 Brassica carinata HOM05D000051 ORTHO05D000015 3.5e-07 58.2 80 45.0
C04p72510 Brassica napus HOM05D000051 ORTHO05D000015 3.5e-07 58.2 83 38.6
BolC4t28739H Brassica oleracea HOM05D000051 ORTHO05D000015 3.5e-07 58.2 83 38.6
CARHR278920 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.5e-07 58.2 80 46.2
BcaB02g08558 Brassica carinata HOM05D000051 ORTHO05D000015 6.1e-07 57.4 81 46.9
Carub.0001s3364 Capsella rubella HOM05D000051 ORTHO05D000015 1.0e-06 56.6 79 43.0
CARHR148010 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.0e-06 55.1 52 51.9
Carub.0002s0815 Capsella rubella HOM05D000051 ORTHO05D000015 3.9e-06 54.7 81 42.0
CARHR121120 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.9e-06 54.7 84 41.7
AL8G32200 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.1e-06 54.3 82 47.6
AT3G55670 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.7e-06 53.5 56 51.8
AT5G56452 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.7e-06 53.5 82 42.7
CARHR148050 Cardamine hirsuta HOM05D000051 ORTHO05D000015 8.7e-06 53.5 41 65.9


User provided reference genes

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