Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p01740 Brassica napus HOM05D003240 ORTHO05D021783 2.2e-160 568.9 290 100.0
BcaC09g47943 Brassica carinata HOM05D003240 ORTHO05D021783 2.1e-142 509.2 361 77.0
A09p39950 Brassica napus HOM05D003240 ORTHO05D021783 5.5e-111 404.8 361 64.8
BcaC06g32208 Brassica carinata HOM05D003240 ORTHO05D021783 6.9e-98 361.3 314 69.1
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 4.5e-89 332.0 351 58.4
BcaC06g33134 Brassica carinata HOM05D003240 ORTHO05D094083 7.2e-79 298.1 286 61.9
BcaC07g41988 Brassica carinata HOM05D003240 ORTHO05D021783 1.2e-76 290.8 245 65.7
BraA02t06117Z Brassica rapa HOM05D003240 ORTHO05D019881 7.8e-57 224.9 333 47.4
BcaC05g26272 Brassica carinata HOM05D003240 ORTHO05D032928 2.9e-56 223.0 332 47.0
BolC7t44723H Brassica oleracea HOM05D003240 ORTHO05D021783 3.6e-54 216.1 117 94.0
C07p62190 Brassica napus HOM05D003240 ORTHO05D019881 4.7e-54 215.7 333 47.4
BraA03t10651Z Brassica rapa HOM05D003240 ORTHO05D032928 2.3e-53 213.4 293 49.5
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 1.2e-52 211.1 305 47.9
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 1.7e-51 207.2 341 44.6
BolC1t05880H Brassica oleracea HOM05D003240 ORTHO05D024027 1.7e-51 207.2 304 47.0
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 6.4e-51 205.3 351 43.9
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 1.4e-50 204.1 351 43.6
C06p44710 Brassica napus HOM05D003240 ORTHO05D017503 3.5e-49 199.5 340 43.2
C06p50180 Brassica napus HOM05D003240 ORTHO05D017535 5.6e-47 192.2 344 43.3
BolC6t40058H Brassica oleracea HOM05D003240 ORTHO05D017535 7.3e-47 191.8 344 43.3
BcaC02g08188 Brassica carinata HOM05D003240 ORTHO05D017535 9.5e-47 191.4 337 43.3
C04p57490 Brassica napus HOM05D003240 ORTHO05D017535 9.5e-47 191.4 337 43.3
BcaC08g43497 Brassica carinata HOM05D003240 ORTHO05D017503 1.2e-46 191.0 322 43.5
C02p62990 Brassica napus HOM05D003240 ORTHO05D042544 4.7e-46 189.1 263 47.5
BolC2t12373H Brassica oleracea HOM05D003240 ORTHO05D042544 4.7e-46 189.1 263 47.5
BcaC08g47278 Brassica carinata HOM05D003240 ORTHO05D017535 8.0e-46 188.3 327 42.2
C03p92080 Brassica napus HOM05D003240 ORTHO05D024027 5.8e-44 182.2 341 41.1
A08p21510 Brassica napus HOM05D003240 ORTHO05D016738 3.7e-43 179.5 134 72.4
BraA08t34100Z Brassica rapa HOM05D003240 ORTHO05D016738 3.7e-43 179.5 134 72.4
BcaC03g18230 Brassica carinata HOM05D003240 ORTHO05D024027 1.1e-42 177.9 329 41.6
BcaC07g36928 Brassica carinata HOM05D003240 ORTHO05D024027 3.2e-42 176.4 337 41.2
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 1.2e-41 174.5 288 43.1
C09p63070 Brassica napus HOM05D003240 ORTHO05D023867 6.0e-41 172.2 135 70.4
C01p00460 Brassica napus HOM05D003240 ORTHO05D016738 7.8e-41 171.8 134 70.9
A09p11060 Brassica napus HOM05D003240 ORTHO05D019881 1.3e-40 171.0 289 45.0
C07p46390 Brassica napus HOM05D003240 ORTHO05D016738 1.7e-40 170.6 134 70.1
BolC7t45157H Brassica oleracea HOM05D003240 ORTHO05D016738 1.7e-40 170.6 134 70.1
BolC8t51497H Brassica oleracea HOM05D003240 ORTHO05D016738 6.6e-40 168.7 134 69.4
C08p00720 Brassica napus HOM05D003240 ORTHO05D016738 1.1e-39 167.9 152 63.8
BcaNung03344 Brassica carinata HOM05D003240 ORTHO05D017535 3.3e-39 166.4 336 40.8
BcaC07g39783 Brassica carinata HOM05D003240 ORTHO05D023867 6.2e-38 162.2 135 67.4
BcaC01g01758 Brassica carinata HOM05D003240 ORTHO05D032152 8.1e-38 161.8 340 40.3
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 1.8e-37 160.6 135 67.4
BcaB02g07983 Brassica carinata HOM05D003240 ORTHO05D017503 4.0e-37 159.5 328 40.9
C03p56700 Brassica napus HOM05D003240 ORTHO05D016738 1.2e-36 157.9 126 69.8
BolC3t17954H Brassica oleracea HOM05D003240 ORTHO05D016738 1.2e-36 157.9 126 69.8
BolC4t25249H Brassica oleracea HOM05D003240 ORTHO05D104461 3.4e-36 156.4 113 70.8
BcaNung03688 Brassica carinata HOM05D003240 ORTHO05D019881 4.4e-36 156.0 136 65.4
C09p71790 Brassica napus HOM05D003240 ORTHO05D097945 3.7e-35 152.9 104 80.8
BcaNung00147 Brassica carinata HOM05D003240 ORTHO05D019881 4.6e-33 146.0 285 42.5
BolC4t25181H Brassica oleracea HOM05D003240 ORTHO05D107020 8.1e-30 135.2 133 59.4
BolC7t42862H Brassica oleracea HOM05D003240 ORTHO05D017535 1.5e-28 131.0 293 38.6
BraA03t12127Z Brassica rapa HOM05D003240 ORTHO05D019967 1.3e-27 127.9 309 35.6
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 3.8e-27 126.3 136 52.2
BcaNung01267 Brassica carinata HOM05D003240 ORTHO05D016738 4.9e-27 125.9 126 61.9
C07p23280 Brassica napus HOM05D003240 ORTHO05D100423 6.4e-27 125.6 291 37.8
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 1.2e-25 121.3 136 50.7
C08p03380 Brassica napus HOM05D008956 ORTHO05D016720 1.6e-25 120.9 132 53.0
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 1.6e-25 120.9 167 47.9
C01p15510 Brassica napus HOM05D003240 ORTHO05D103301 7.8e-25 118.6 142 56.3
C03p03630 Brassica napus HOM05D008956 ORTHO05D013254 1.3e-24 117.9 170 46.5
BraA03t14966Z Brassica rapa HOM05D008956 ORTHO05D016720 2.3e-24 117.1 133 53.4
BcaC05g26508 Brassica carinata HOM05D003240 ORTHO05D023867 5.1e-24 115.9 96 67.7
C08p50480 Brassica napus HOM05D003240 ORTHO05D101800 5.1e-24 115.9 66 90.9
BolC5t31284H Brassica oleracea HOM05D003240 ORTHO05D023867 5.1e-24 115.9 96 67.7
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 6.6e-24 115.5 170 45.9
C06p08310 Brassica napus HOM05D008956 ORTHO05D016720 8.6e-24 115.2 132 51.5
BcaC08g46075 Brassica carinata HOM05D003240 ORTHO05D019967 1.5e-23 114.4 272 35.3
C03p72200 Brassica napus HOM05D003240 ORTHO05D032152 1.2e-22 111.3 275 36.4
BolC3t19516H Brassica oleracea HOM05D003240 ORTHO05D032152 1.2e-22 111.3 275 36.4
C03p42360 Brassica napus HOM05D008956 ORTHO05D013254 2.8e-22 110.2 125 51.2
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 4.0e-21 106.3 292 36.0
C09p56640 Brassica napus HOM05D003240 ORTHO05D103622 5.2e-21 105.9 230 40.9
C09p65770 Brassica napus HOM05D008956 ORTHO05D013254 5.2e-21 105.9 158 46.8
BcaC04g24027 Brassica carinata HOM05D012417 ORTHO05D024193 6.9e-21 105.5 292 36.0
C09p73110 Brassica napus HOM05D003240 ORTHO05D040560 6.9e-21 105.5 245 38.0
BolC9t59399H Brassica oleracea HOM05D008956 ORTHO05D105535 1.2e-20 104.8 124 54.0
BraA04t17515Z Brassica rapa HOM05D012445 ORTHO05D018631 2.0e-20 104.0 112 58.0
BcaC01g00646 Brassica carinata HOM05D003240 ORTHO05D027650 2.6e-20 103.6 144 47.9
C01p20310 Brassica napus HOM05D002197 ORTHO05D002462 3.4e-20 103.2 119 60.5
C07p36910 Brassica napus HOM05D008956 ORTHO05D013254 3.4e-20 103.2 147 47.6
C07p48040 Brassica napus HOM05D011346 ORTHO05D015475 3.4e-20 103.2 250 37.6
BolC7t44203H Brassica oleracea HOM05D008956 ORTHO05D013254 3.4e-20 103.2 147 47.6
C02p63910 Brassica napus HOM05D003240 ORTHO05D027650 4.4e-20 102.8 144 47.9
C06p39900 Brassica napus HOM05D008956 ORTHO05D101413 5.8e-20 102.4 105 55.2
BcaC03g13399 Brassica carinata HOM05D012417 ORTHO05D024193 7.6e-20 102.1 292 34.6
A07p11540 Brassica napus HOM05D003240 ORTHO05D019967 9.9e-20 101.7 272 33.1
C03p21650 Brassica napus HOM05D012417 ORTHO05D024193 9.9e-20 101.7 296 34.5
BolC3t14549H Brassica oleracea HOM05D012417 ORTHO05D024193 9.9e-20 101.7 296 34.5
BolC6t39036H Brassica oleracea HOM05D003240 ORTHO05D019967 1.3e-19 101.3 253 34.8
C02p12300 Brassica napus HOM05D003240 ORTHO05D027650 2.2e-19 100.5 144 47.9
C07p16840 Brassica napus HOM05D003240 ORTHO05D027650 2.2e-19 100.5 144 47.2
BraA03t13996Z Brassica rapa HOM05D012445 ORTHO05D018631 2.2e-19 100.5 112 58.0
BraA09t36164Z Brassica rapa HOM05D012445 ORTHO05D018631 2.2e-19 100.5 112 58.0
BraA02t08299Z Brassica rapa HOM05D002233 ORTHO05D002299 3.8e-19 99.8 145 51.7
C05p19960 Brassica napus HOM05D003240 ORTHO05D019967 6.4e-19 99.0 272 32.0
BolC6t39565H Brassica oleracea HOM05D008956 ORTHO05D013254 3.2e-18 96.7 137 48.9
BcaB02g08739 Brassica carinata HOM05D010232 ORTHO05D023893 2.7e-17 93.6 355 30.4
C06p45070 Brassica napus HOM05D008956 ORTHO05D013254 2.7e-17 93.6 136 47.8
BolC5t30694H Brassica oleracea HOM05D003240 ORTHO05D019967 3.5e-17 93.2 245 33.9
C09p34960 Brassica napus HOM05D010232 ORTHO05D016018 6.0e-17 92.4 129 50.4
A08p22750 Brassica napus HOM05D010232 ORTHO05D016018 7.8e-17 92.0 125 50.4
BolC6t36746H Brassica oleracea HOM05D012445 ORTHO05D040835 7.8e-17 92.0 112 53.6
BraA08t34244Z Brassica rapa HOM05D010232 ORTHO05D016018 7.8e-17 92.0 125 50.4
C03p51870 Brassica napus HOM05D012445 ORTHO05D018631 1.7e-16 90.9 112 53.6
BNapus_Darmor_BZH_scaffold_109p00210 Brassica napus HOM05D011346 ORTHO05D015475 2.3e-16 90.5 91 59.3
C07p30560 Brassica napus HOM05D003240 ORTHO05D039579 2.3e-16 90.5 165 44.2
C06p51070 Brassica napus HOM05D011346 ORTHO05D015475 3.0e-16 90.1 91 60.4
BraA09t39506Z Brassica rapa HOM05D011346 ORTHO05D043120 3.0e-16 90.1 91 59.3
C09p16440 Brassica napus HOM05D012445 ORTHO05D040835 3.9e-16 89.7 112 53.6
C07p35510 Brassica napus HOM05D008956 ORTHO05D016720 5.1e-16 89.4 104 52.9
BolC1t00828H Brassica oleracea HOM05D010232 ORTHO05D016018 5.1e-16 89.4 129 48.8
BolC7t44074H Brassica oleracea HOM05D008956 ORTHO05D016720 5.1e-16 89.4 104 52.9
C01p15500 Brassica napus HOM05D003240 ORTHO05D096677 8.7e-16 88.6 149 43.6
C04p07300 Brassica napus HOM05D011346 ORTHO05D015475 1.1e-15 88.2 91 59.3
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 1.1e-15 88.2 140 46.4
C06p40860 Brassica napus HOM05D012445 ORTHO05D041381 1.5e-15 87.8 147 44.9
BolC1t01225H Brassica oleracea HOM05D011346 ORTHO05D015475 1.5e-15 87.8 89 59.6
BcaB08g36836 Brassica carinata HOM05D008956 ORTHO05D090626 1.9e-15 87.4 142 43.0
BolC6t39347H Brassica oleracea HOM05D012445 ORTHO05D041381 1.9e-15 87.4 147 44.9
BraA01t01392Z Brassica rapa HOM05D011346 ORTHO05D015475 1.9e-15 87.4 89 59.6
BcaC02g11293 Brassica carinata HOM05D008956 ORTHO05D013254 2.5e-15 87.0 115 49.6
C04p69810 Brassica napus HOM05D011346 ORTHO05D099510 2.5e-15 87.0 93 58.1
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 2.5e-15 87.0 141 48.2
BolC9t53578H Brassica oleracea HOM05D011346 ORTHO05D043120 2.5e-15 87.0 91 58.2
BcaC03g17495 Brassica carinata HOM05D001104 ORTHO05D006624 5.6e-15 85.9 100 55.0
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 7.3e-15 85.5 141 47.5
BcaC09g51848 Brassica carinata HOM05D010232 ORTHO05D016018 1.6e-14 84.3 129 46.5
C01p08510 Brassica napus HOM05D010232 ORTHO05D016018 1.6e-14 84.3 130 47.7
BcaB04g21282 Brassica carinata HOM05D010232 ORTHO05D016018 2.1e-14 84.0 114 50.9
C01p08460 Brassica napus HOM05D010232 ORTHO05D016018 2.1e-14 84.0 129 46.5
BolC4t22353H Brassica oleracea HOM05D011346 ORTHO05D106028 3.6e-14 83.2 91 57.1
C04p03050 Brassica napus HOM05D011346 ORTHO05D015475 4.8e-14 82.8 91 58.2
BolC4t21947H Brassica oleracea HOM05D011346 ORTHO05D015475 4.8e-14 82.8 91 58.2
BcaC08g43321 Brassica carinata HOM05D010232 ORTHO05D023893 1.1e-13 81.6 373 28.4
BcaC02g12116 Brassica carinata HOM05D003240 ORTHO05D039579 1.4e-13 81.3 153 43.1
C02p54520 Brassica napus HOM05D001104 ORTHO05D006624 2.4e-13 80.5 96 54.2
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 2.4e-13 80.5 201 36.3
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 2.4e-13 80.5 142 46.5
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 3.1e-13 80.1 142 43.0
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 3.1e-13 80.1 142 47.9
C01p00010 Brassica napus HOM05D010928 ORTHO05D016821 3.1e-13 80.1 75 62.7
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 6.9e-13 79.0 141 44.0
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 9.0e-13 78.6 116 47.4
C04p42100 Brassica napus HOM05D003240 ORTHO05D099985 9.0e-13 78.6 146 39.7
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 1.2e-12 78.2 116 48.3
BcaC06g33773 Brassica carinata HOM05D013416 ORTHO05D024230 1.2e-12 78.2 114 51.8
C02p59180 Brassica napus HOM05D010928 ORTHO05D103551 1.5e-12 77.8 75 61.3
BcaC03g17878 Brassica carinata HOM05D010928 ORTHO05D016821 2.6e-12 77.0 265 34.3
C05p62330 Brassica napus HOM05D003240 ORTHO05D019895 2.6e-12 77.0 125 50.4
BolC2t11520H Brassica oleracea HOM05D001104 ORTHO05D006624 2.6e-12 77.0 96 53.1
C02p54570 Brassica napus HOM05D001104 ORTHO05D006624 3.4e-12 76.6 96 53.1
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 4.5e-12 76.3 100 55.0
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 5.8e-12 75.9 142 45.1
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 7.6e-12 75.5 100 54.0
C07p01490 Brassica napus HOM05D010928 ORTHO05D016821 9.9e-12 75.1 123 46.3
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 9.9e-12 75.1 148 38.5
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 9.9e-12 75.1 148 38.5
C07p57580 Brassica napus HOM05D010928 ORTHO05D016821 1.3e-11 74.7 123 45.5
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 1.3e-11 74.7 142 45.1
BcaB03g11771 Brassica carinata HOM05D010928 ORTHO05D091924 1.7e-11 74.3 73 57.5
C03p42330 Brassica napus HOM05D003240 ORTHO05D019967 1.7e-11 74.3 271 29.2
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 2.2e-11 73.9 149 38.3
BcaC02g12174 Brassica carinata HOM05D003240 ORTHO05D094064 2.9e-11 73.6 105 49.5
C05p58750 Brassica napus HOM05D003240 ORTHO05D019881 2.9e-11 73.6 74 60.8
A07p12250 Brassica napus HOM05D003240 ORTHO05D102247 3.8e-11 73.2 48 72.9
BcaB03g14123 Brassica carinata HOM05D010928 ORTHO05D090945 4.9e-11 72.8 85 50.6
BcaC07g42699 Brassica carinata HOM05D010928 ORTHO05D090478 4.9e-11 72.8 85 50.6
BcaNung03034 Brassica carinata HOM05D010928 ORTHO05D094015 4.9e-11 72.8 85 50.6
BolC7t45517H Brassica oleracea HOM05D010928 ORTHO05D016821 4.9e-11 72.8 116 48.3
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 6.4e-11 72.4 114 47.4
BcaC05g27248 Brassica carinata HOM05D010232 ORTHO05D023893 8.4e-11 72.0 126 46.8
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 1.1e-10 71.6 142 43.0
BraA01t00344Z Brassica rapa HOM05D010928 ORTHO05D016821 1.1e-10 71.6 71 59.2
BcaC08g43240 Brassica carinata HOM05D013416 ORTHO05D024230 1.4e-10 71.2 127 46.5
BcaB07g33779 Brassica carinata HOM05D003240 ORTHO05D091816 2.4e-10 70.5 100 43.0
BcaC08g46504 Brassica carinata HOM05D009754 ORTHO05D027209 2.4e-10 70.5 141 44.7
BolC3t12674H Brassica oleracea HOM05D010928 ORTHO05D016821 2.4e-10 70.5 143 42.7
BolC5t34528H Brassica oleracea HOM05D003240 ORTHO05D019881 3.2e-10 70.1 74 58.1
C04p67930 Brassica napus HOM05D008956 ORTHO05D098482 5.4e-10 69.3 78 52.6
C06p08520 Brassica napus HOM05D011346 ORTHO05D015475 7.1e-10 68.9 91 51.6
BraA01t00731Z Brassica rapa HOM05D010928 ORTHO05D016821 9.3e-10 68.6 115 46.1
BcaC07g39648 Brassica carinata HOM05D003240 ORTHO05D095172 2.1e-09 67.4 103 49.5
BolC3t17473H Brassica oleracea HOM05D012445 ORTHO05D018631 2.1e-09 67.4 77 54.5
C06p21700 Brassica napus HOM05D008956 ORTHO05D100830 4.6e-09 66.2 68 57.4
BcaC08g44779 Brassica carinata HOM05D008872 ORTHO05D032631 1.0e-08 65.1 135 43.0
BolC5t28988H Brassica oleracea HOM05D010928 ORTHO05D016821 1.8e-08 64.3 135 43.0
BcaB07g33645 Brassica carinata HOM05D010893 ORTHO05D014123 8.7e-08 62.0 147 42.2
BcaC08g44168 Brassica carinata HOM05D010928 ORTHO05D093445 8.7e-08 62.0 135 40.0
A06p33010 Brassica napus HOM05D003240 ORTHO05D098331 1.1e-07 61.6 84 53.6
BcaB03g13577 Brassica carinata HOM05D017424 ORTHO05D032352 2.5e-07 60.5 104 45.2
BcaC07g39633 Brassica carinata HOM05D017424 ORTHO05D039094 4.3e-07 59.7 141 36.2
C06p39430 Brassica napus HOM05D003240 ORTHO05D017503 5.6e-07 59.3 117 36.8
C06p51590 Brassica napus HOM05D003240 ORTHO05D103766 7.4e-07 58.9 58 60.3
C08p00470 Brassica napus HOM05D003240 ORTHO05D033262 2.8e-06 57.0 109 41.3
BcaC03g17650 Brassica carinata HOM05D000109 ORTHO05D000210 4.8e-06 56.2 121 35.5
BolC2t08519H Brassica oleracea HOM05D009754 ORTHO05D105200 6.2e-06 55.8 65 58.5
BolC5t31661H Brassica oleracea HOM05D010893 ORTHO05D032720 8.1e-06 55.5 49 61.2


User provided reference genes

Program Settings