Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p01700 Brassica napus HOM05D010095 ORTHO05D012148 4.3e-93 344.7 187 100.0
BolC9t53104H Brassica oleracea HOM05D010095 ORTHO05D012148 4.3e-93 344.7 187 100.0
BcaC04g24041 Brassica carinata HOM05D010095 ORTHO05D012148 2.9e-89 332.0 198 93.4
BraA09t35818Z Brassica rapa HOM05D010095 ORTHO05D012148 3.8e-89 331.6 187 96.8
A09p01600 Brassica napus HOM05D010095 ORTHO05D012148 6.5e-89 330.9 187 95.7
BcaB01g02075 Brassica carinata HOM05D010095 ORTHO05D012148 6.9e-83 310.8 191 91.1
AT4G02160 Arabidopsis thaliana HOM05D010095 ORTHO05D012148 6.7e-62 241.1 189 74.6
CARHR250340 Cardamine hirsuta HOM05D010095 ORTHO05D012148 2.3e-54 216.1 184 73.9
Thhalv10028992m.g Eutrema salsugineum HOM05D010095 ORTHO05D012148 1.4e-51 206.8 190 69.5
AL6G51000 Arabidopsis lyrata HOM05D010095 ORTHO05D012148 5.5e-48 194.9 165 71.5
Carub.0006s3501 Capsella rubella HOM05D010095 ORTHO05D012148 8.0e-47 191.0 189 67.2
Thhalv10009861m.g Eutrema salsugineum HOM05D010095 ORTHO05D012148 1.6e-42 176.8 177 55.4
Sp6g02060 Schrenkiella parvula HOM05D010095 ORTHO05D012148 4.7e-39 165.2 189 56.1
BcaB03g15797 Brassica carinata HOM05D010095 ORTHO05D012148 8.0e-39 164.5 201 51.7
BolC5t28919H Brassica oleracea HOM05D010095 ORTHO05D012148 3.4e-37 159.1 179 57.5
C05p01370 Brassica napus HOM05D010095 ORTHO05D012148 1.7e-36 156.8 179 57.0
AT5G61710 Arabidopsis thaliana HOM05D010095 ORTHO05D012148 6.4e-36 154.8 168 54.8
A10p01390 Brassica napus HOM05D010095 ORTHO05D012148 5.4e-35 151.8 179 55.9
CARHR001980 Cardamine hirsuta HOM05D010095 ORTHO05D012148 1.0e-33 147.5 207 52.2
BraA10t42415Z Brassica rapa HOM05D010095 ORTHO05D012148 8.0e-31 137.9 180 53.3
THA.LOC104825949 Tarenaya hassleriana HOM05D010095 ORTHO05D012148 2.1e-23 113.2 156 57.1
Carub.0001s0175 Capsella rubella HOM05D010095 ORTHO05D012148 8.1e-23 111.3 189 40.7
Aa31LG1G9880 Aethionema arabicum HOM05D010095 ORTHO05D012148 8.9e-22 107.8 114 53.5
AL1G12030 Arabidopsis lyrata HOM05D010095 ORTHO05D012148 2.0e-21 106.7 166 42.8
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 1.5e-13 80.5 174 37.9
Cfa005843 Carpinus fangiana HOM05D007468 ORTHO05D009051 3.4e-13 79.3 175 32.0
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 9.9e-13 77.8 183 36.6
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 2.2e-12 76.6 174 32.8
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 8.4e-12 74.7 168 35.7
Haze_05006 Corylus avellana HOM05D007468 ORTHO05D009051 1.4e-11 73.9 173 34.7
Sp1g01680 Schrenkiella parvula HOM05D007766 ORTHO05D009733 1.4e-11 73.9 154 34.4
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 4.6e-10 68.9 175 32.0
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 1.3e-09 67.4 168 33.3
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 2.3e-09 66.6 172 33.1
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 2.3e-09 66.6 157 35.0
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 3.9e-09 65.9 174 32.2
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 1.9e-08 63.5 166 33.7
Gorai.001G142900 Gossypium raimondii HOM05D007468 ORTHO05D009051 5.6e-08 62.0 159 33.3
Aqoxy2G02809 Aquilegia oxysepala HOM05D007468 ORTHO05D009051 7.3e-08 61.6 155 32.3
Gohir.D07G131600 Gossypium hirsutum HOM05D007468 ORTHO05D009051 9.6e-08 61.2 159 33.3
Potri.002G199100 Populus trichocarpa HOM05D007468 ORTHO05D009051 9.6e-08 61.2 189 32.8
Duzib133G0259 Durio zibethinus HOM05D007468 ORTHO05D009051 1.2e-07 60.8 171 32.2
PSO357G0021 Papaver somniferum HOM05D007468 ORTHO05D009051 1.2e-07 60.8 161 32.9
CiPaw.07G114800 Carya illinoinensis HOM05D007468 ORTHO05D009051 2.1e-07 60.1 153 31.4
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 2.1e-07 60.1 166 34.3
Gohir.A07G127300 Gossypium hirsutum HOM05D007468 ORTHO05D009051 2.1e-07 60.1 161 33.5
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 2.1e-07 60.1 129 35.7
Ciclev10024491m.g Citrus clementina HOM05D007468 ORTHO05D009051 3.6e-07 59.3 174 33.9
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 3.6e-07 59.3 170 31.2
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 8.1e-07 58.2 129 34.1
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 8.1e-07 58.2 179 32.4
MELO3C017927.2 Cucumis melo HOM05D007468 ORTHO05D009051 1.1e-06 57.8 163 32.5
Cpa.g.sc18.3 Carica papaya HOM05D007468 ORTHO05D009051 1.4e-06 57.4 179 33.5
PSO170G3554 Papaver somniferum HOM05D007468 ORTHO05D009051 1.4e-06 57.4 151 32.5
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 1.8e-06 57.0 169 30.2
MBI19_g29995_MAGBIO Magnolia biondii HOM05D007468 ORTHO05D009051 3.1e-06 56.2 185 31.4
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 4.0e-06 55.8 184 31.5
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 6.8e-06 55.1 169 30.8
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 6.8e-06 55.1 121 40.5
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 6.8e-06 55.1 121 41.3
SGA_v2.0_scaffold334G49050 Striga asiatica HOM05D007468 ORTHO05D009051 8.9e-06 54.7 183 33.3
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 8.9e-06 54.7 145 33.1


User provided reference genes

Program Settings