Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 4.0e-156 554.7 274 100.0
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 3.5e-144 515.0 281 93.2
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 3.5e-144 515.0 281 93.2
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.4e-137 493.0 283 89.4
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 1.2e-128 463.4 269 88.5
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.0e-122 443.7 261 87.0
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 4.4e-118 428.3 261 85.1
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 4.4e-118 428.3 262 84.7
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 2.4e-116 422.5 262 83.2
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 3.1e-116 422.2 262 83.6
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 2.9e-114 415.6 262 83.2
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 8.5e-114 414.1 257 83.3
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 2.7e-99 365.9 221 82.8
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.3e-98 363.6 260 70.4
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.9e-98 362.5 257 70.0
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 3.8e-98 362.1 260 70.0
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 3.8e-98 362.1 257 70.8
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 6.5e-98 361.3 257 70.8
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 1.1e-97 360.5 257 68.5
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.5e-97 360.1 257 68.9
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 2.5e-97 359.4 262 69.5
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 2.5e-97 359.4 259 69.9
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 4.2e-97 358.6 261 69.0
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 7.2e-97 357.8 261 70.1
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.1e-96 356.3 287 65.2
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.1e-96 356.3 269 67.7
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 2.8e-96 355.9 266 69.2
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 6.1e-96 354.8 261 68.6
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.3e-95 352.8 269 67.3
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 8.8e-95 350.9 269 66.9
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.5e-94 350.1 257 68.1
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.5e-94 350.1 257 68.1
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 2.0e-94 349.7 246 70.3
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 2.6e-94 349.4 245 71.0
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 3.4e-94 349.0 261 68.6
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 5.7e-94 348.2 262 68.3
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 7.5e-94 347.8 244 69.3
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 9.8e-94 347.4 246 69.9
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 9.8e-94 347.4 261 67.4
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 1.3e-93 347.1 250 70.0
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 3.7e-93 345.5 244 71.7
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 3.7e-93 345.5 250 69.6
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 4.9e-93 345.1 261 67.4
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 6.3e-93 344.7 302 60.9
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.1e-92 344.0 261 67.4
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 1.4e-92 343.6 244 71.3
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.8e-92 343.2 244 70.9
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 1.8e-92 343.2 246 69.5
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 1.8e-92 343.2 246 69.1
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 2.4e-92 342.8 269 67.3
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 3.1e-92 342.4 259 66.8
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 3.1e-92 342.4 261 66.3
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 5.4e-92 341.7 246 68.7
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 5.4e-92 341.7 301 60.8
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.0e-91 339.7 292 62.0
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 3.5e-91 339.0 248 67.3
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 3.5e-91 339.0 244 68.9
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 3.5e-91 339.0 244 68.0
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 3.5e-91 339.0 259 66.4
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 3.5e-91 339.0 261 65.9
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 5.9e-91 338.2 244 70.9
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 5.9e-91 338.2 244 68.4
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 7.8e-91 337.8 244 68.4
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 1.0e-90 337.4 253 68.0
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.3e-90 337.0 244 67.6
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 1.7e-90 336.7 244 70.9
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 1.7e-90 336.7 243 70.0
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 1.1e-89 334.0 271 63.1
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.5e-89 333.6 244 68.0
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 4.3e-89 332.0 244 68.0
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 5.6e-89 331.6 244 68.4
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 7.3e-89 331.3 244 66.4
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 4.7e-88 328.6 253 66.8
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 6.1e-88 328.2 256 64.8
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 6.1e-88 328.2 256 64.8
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 6.1e-88 328.2 245 68.6
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.8e-87 326.6 246 67.5
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.8e-87 326.6 236 68.6
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 2.3e-87 326.2 198 78.8
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 6.8e-87 324.7 238 68.5
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 1.2e-86 323.9 197 80.2
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 2.0e-86 323.2 244 65.2
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 5.7e-86 321.6 288 59.0
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 9.8e-86 320.9 198 77.3
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 3.7e-85 318.9 246 65.9
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 2.4e-84 316.2 198 76.3
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 4.1e-84 315.5 261 62.8
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.3e-82 310.5 197 75.6
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 1.3e-82 310.5 198 75.8
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 8.6e-82 307.8 198 75.8
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.1e-81 307.4 197 75.1
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 3.3e-81 305.8 250 62.4
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 7.3e-81 304.7 190 77.4
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 4.7e-80 302.0 290 56.9
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 4.0e-79 298.9 198 74.2
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 7.5e-78 294.7 251 59.8
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 9.8e-78 294.3 261 61.7
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 2.9e-77 292.7 261 61.3
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 5.4e-76 288.5 245 62.4
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 2.0e-75 286.6 196 68.9
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 1.7e-74 283.5 252 59.1
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 3.9e-74 282.3 250 58.8
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 6.6e-74 281.6 244 60.7
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 1.5e-73 280.4 253 58.9
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.9e-73 280.0 178 78.1
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 5.8e-70 268.5 197 67.5
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 9.2e-68 261.2 198 66.7
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 4.0e-63 245.7 147 83.7
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 1.2e-62 244.2 244 49.2
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.5e-62 243.8 251 51.0
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 3.9e-58 229.2 197 61.9
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 4.3e-57 225.7 176 67.6
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 4.3e-57 225.7 260 45.4
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 2.8e-56 223.0 251 46.6
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 1.7e-53 213.8 254 44.5
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 2.4e-47 193.4 147 65.3
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 5.6e-41 172.2 107 72.9
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 2.9e-37 159.8 295 33.6
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.0e-30 137.1 96 69.8
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 9.3e-28 128.3 240 32.9
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 2.5e-25 120.2 209 37.8
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.1e-23 114.8 86 70.9
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 9.3e-20 101.7 98 53.1
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 1.2e-19 101.3 72 69.4
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 5.3e-15 85.9 90 52.2
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 3.4e-14 83.2 59 74.6


User provided reference genes

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