Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 5.4e-272 940.6 566 100.0
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 5.4e-272 940.6 566 100.0
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 2.4e-240 835.5 568 93.1
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 1.1e-219 766.9 590 84.4
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 1.1e-205 720.3 503 78.7
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 2.0e-202 709.5 517 77.0
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 1.7e-201 706.4 482 80.5
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 6.5e-201 704.5 486 80.2
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 9.8e-189 664.1 556 66.9
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 2.3e-166 589.7 506 63.4
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 1.5e-141 507.3 501 56.3
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.0e-141 506.9 521 55.1
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.0e-141 506.9 503 55.3
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 4.4e-141 505.8 503 55.3
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 7.6e-141 505.0 516 54.3
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 6.0e-138 495.4 503 54.9
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 1.3e-137 494.2 524 53.4
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 1.1e-136 491.1 495 54.1
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 1.5e-136 490.7 503 54.3
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 2.5e-136 490.0 503 54.5
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 5.6e-136 488.8 519 53.2
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 3.6e-135 486.1 502 53.6
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 1.4e-134 484.2 524 51.5
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 1.4e-134 484.2 521 53.7
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 2.4e-134 483.4 504 52.2
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 1.5e-133 480.7 504 53.2
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 4.4e-133 479.2 505 53.3
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 3.8e-132 476.1 501 52.9
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 7.9e-130 468.4 496 55.4
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 1.0e-129 468.0 532 50.4
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.0e-129 466.5 514 52.3
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 5.1e-129 465.7 506 52.8
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 5.1e-129 465.7 519 51.4
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 1.5e-128 464.2 531 51.4
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 1.5e-128 464.2 523 54.5
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 2.5e-128 463.4 530 51.1
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 1.8e-126 457.2 493 52.1
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 5.3e-126 455.7 495 51.7
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 6.9e-126 455.3 507 52.1
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 6.9e-126 455.3 504 50.4
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 9.0e-126 454.9 528 49.6
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 1.2e-125 454.5 500 51.8
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 2.0e-125 453.8 512 49.8
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 2.0e-125 453.8 520 51.2
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 2.6e-125 453.4 503 51.3
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 2.6e-125 453.4 498 51.2
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 4.5e-125 452.6 513 49.3
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 7.6e-125 451.8 498 51.8
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 9.9e-125 451.4 498 51.0
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 9.9e-125 451.4 516 50.6
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 1.3e-124 451.1 532 48.9
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 1.3e-124 451.1 516 50.0
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 1.3e-124 451.1 515 49.1
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 1.7e-124 450.7 500 50.4
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 2.2e-124 450.3 506 50.2
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 2.9e-124 449.9 497 51.3
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 2.9e-124 449.9 522 48.9
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 3.8e-124 449.5 512 49.4
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 8.4e-124 448.4 512 50.6
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 8.4e-124 448.4 537 47.9
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 1.1e-123 448.0 516 51.4
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 2.4e-123 446.8 506 50.4
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 3.2e-123 446.4 495 51.1
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 3.2e-123 446.4 493 51.3
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 5.5e-123 445.7 513 48.5
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 7.1e-123 445.3 515 48.9
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 1.2e-122 444.5 514 50.2
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 1.6e-122 444.1 502 51.4
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 4.6e-122 442.6 520 50.0
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 6.0e-122 442.2 519 48.4
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 7.9e-122 441.8 520 50.0
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 7.9e-122 441.8 499 50.7
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 5.1e-121 439.1 505 50.1
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 6.7e-121 438.7 517 50.1
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 1.1e-120 438.0 517 49.9
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 1.5e-120 437.6 531 47.8
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 1.9e-120 437.2 501 50.5
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 2.5e-120 436.8 495 50.9
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 7.4e-120 435.3 509 49.5
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 5.3e-118 429.1 518 48.1
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 9.0e-118 428.3 501 49.7
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 1.5e-117 427.6 490 48.2
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 3.4e-117 426.4 522 47.9
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 6.7e-113 412.1 515 47.0
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.6e-111 407.5 512 47.5
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 2.7e-106 390.2 504 44.2
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 1.8e-105 387.5 501 45.5
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 1.9e-104 384.0 492 46.1
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 1.3e-103 381.3 419 51.3
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 1.2e-101 374.8 491 46.4
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 4.5e-101 372.9 490 46.7
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 3.8e-100 369.8 278 73.4
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 9.4e-99 365.2 484 45.7
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 4.6e-98 362.8 422 49.8
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 3.9e-97 359.8 420 50.0
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.0e-92 345.1 515 43.3
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 1.4e-91 341.3 217 78.8
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 6.7e-89 332.4 432 45.8
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 2.6e-88 330.5 525 41.1
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 4.1e-86 323.2 456 45.0
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 7.0e-86 322.4 417 49.9
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 5.9e-85 319.3 453 41.9
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 1.2e-82 311.6 466 41.6
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 2.1e-82 310.8 314 52.2
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 2.6e-80 303.9 339 49.6
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 4.1e-78 296.6 410 44.4
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 1.1e-54 218.8 490 33.7
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.2e-50 205.3 219 51.1
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 5.4e-38 163.3 234 42.3
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 1.8e-33 148.3 344 32.0
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 4.9e-31 140.2 521 27.8
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 6.9e-17 93.2 159 40.9
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 5.8e-08 63.5 108 40.7
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 2.4e-06 58.2 78 44.9
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 7.1e-06 56.6 30 83.3


User provided reference genes

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