Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p52720 Brassica napus HOM05D010217 ORTHO05D028134 1.9e-51 205.7 111 100.0
BolC8t52798H Brassica oleracea HOM05D010217 ORTHO05D028134 1.2e-50 203.0 111 99.1
BraA09t42162Z Brassica rapa HOM05D010217 ORTHO05D028134 3.6e-47 191.4 111 92.8
A09p68270 Brassica napus HOM05D010217 ORTHO05D028134 6.2e-47 190.7 111 92.8
BcaC07g42235 Brassica carinata HOM05D010217 ORTHO05D027043 1.5e-24 116.3 105 64.8
BcaC07g42240 Brassica carinata HOM05D010217 ORTHO05D027043 5.6e-24 114.4 105 63.8
BolC8t52797H Brassica oleracea HOM05D010217 ORTHO05D027043 5.6e-24 114.4 105 63.8
C08p52710 Brassica napus HOM05D010217 ORTHO05D027043 1.3e-23 113.2 105 62.9
A09p68260 Brassica napus HOM05D000803 ORTHO05D001162 1.4e-22 109.8 100 64.0
BraA09t42161Z Brassica rapa HOM05D000803 ORTHO05D001162 1.1e-14 83.6 58 74.1
Carub.0001s0277 Capsella rubella HOM05D010217 ORTHO05D014062 1.1e-11 73.6 95 44.2
A03p30150 Brassica napus HOM05D010217 ORTHO05D014062 1.4e-11 73.2 106 42.5
BcaC01g00010 Brassica carinata HOM05D010217 ORTHO05D014062 4.2e-11 71.6 96 46.9
C03p74780 Brassica napus HOM05D010217 ORTHO05D014062 4.2e-11 71.6 96 46.9
BolC3t19727H Brassica oleracea HOM05D010217 ORTHO05D014062 9.4e-11 70.5 96 45.8
BraA03t12198Z Brassica rapa HOM05D010217 ORTHO05D014062 1.2e-10 70.1 106 40.6
C03p36360 Brassica napus HOM05D010217 ORTHO05D014062 1.6e-10 69.7 106 40.6
BolC3t15950H Brassica oleracea HOM05D010217 ORTHO05D014062 1.6e-10 69.7 106 40.6
BcaB03g12131 Brassica carinata HOM05D010217 ORTHO05D014062 7.9e-10 67.4 96 41.7
BcaB03g12132 Brassica carinata HOM05D010217 ORTHO05D014062 7.9e-10 67.4 96 41.7
Sp6g04300 Schrenkiella parvula HOM05D010217 ORTHO05D014062 3.9e-09 65.1 105 41.0
BcaB01g02581 Brassica carinata HOM05D010217 ORTHO05D014062 5.1e-09 64.7 105 40.0
A08p25840 Brassica napus HOM05D010217 ORTHO05D014062 7.4e-08 60.8 92 44.6
AT1G03660 Arabidopsis thaliana HOM05D010217 ORTHO05D014062 3.7e-07 58.5 85 41.2
BraA08t34539Z Brassica rapa HOM05D010217 ORTHO05D014062 5.3e-06 54.7 94 39.4


User provided reference genes

Program Settings