Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p52710 Brassica napus HOM05D010217 ORTHO05D027043 1.3e-79 299.7 157 100.0
BcaC07g42240 Brassica carinata HOM05D010217 ORTHO05D027043 1.7e-74 282.7 157 95.5
BolC8t52797H Brassica oleracea HOM05D010217 ORTHO05D027043 1.7e-74 282.7 157 95.5
BcaC07g42235 Brassica carinata HOM05D010217 ORTHO05D027043 8.4e-66 253.8 156 86.5
A09p68260 Brassica napus HOM05D000803 ORTHO05D001162 1.4e-60 236.5 136 89.7
BraA09t42161Z Brassica rapa HOM05D000803 ORTHO05D001162 7.2e-41 171.0 95 89.5
Sp6g04300 Schrenkiella parvula HOM05D010217 ORTHO05D014062 2.8e-29 132.5 154 53.9
C03p36360 Brassica napus HOM05D010217 ORTHO05D014062 5.9e-27 124.8 154 51.9
BolC3t15950H Brassica oleracea HOM05D010217 ORTHO05D014062 5.9e-27 124.8 154 51.9
BraA09t42162Z Brassica rapa HOM05D010217 ORTHO05D028134 5.9e-27 124.8 105 65.7
Carub.0001s0277 Capsella rubella HOM05D010217 ORTHO05D014062 6.5e-26 121.3 155 50.3
BcaB01g02581 Brassica carinata HOM05D010217 ORTHO05D014062 1.9e-25 119.8 154 50.0
A03p30150 Brassica napus HOM05D010217 ORTHO05D014062 1.9e-25 119.8 154 50.0
A09p68270 Brassica napus HOM05D010217 ORTHO05D028134 2.5e-25 119.4 105 63.8
BraA03t12198Z Brassica rapa HOM05D010217 ORTHO05D014062 4.2e-25 118.6 154 48.7
BolC8t52798H Brassica oleracea HOM05D010217 ORTHO05D028134 7.2e-25 117.9 105 62.9
C08p52720 Brassica napus HOM05D010217 ORTHO05D028134 1.6e-24 116.7 105 62.9
BcaC01g00010 Brassica carinata HOM05D010217 ORTHO05D014062 3.3e-17 92.4 138 42.0
C03p74780 Brassica napus HOM05D010217 ORTHO05D014062 3.3e-17 92.4 138 42.0
BcaB03g12131 Brassica carinata HOM05D010217 ORTHO05D014062 1.6e-16 90.1 139 37.4
BcaB03g12132 Brassica carinata HOM05D010217 ORTHO05D014062 1.6e-16 90.1 139 37.4
BolC3t19727H Brassica oleracea HOM05D010217 ORTHO05D014062 1.6e-16 90.1 137 41.6
AT1G03660 Arabidopsis thaliana HOM05D010217 ORTHO05D014062 9.8e-14 80.9 96 45.8
A08p25840 Brassica napus HOM05D010217 ORTHO05D014062 7.8e-11 71.2 122 39.3
BraA08t34539Z Brassica rapa HOM05D010217 ORTHO05D014062 1.0e-10 70.9 119 40.3
Sp6g04290 Schrenkiella parvula HOM05D000264 ORTHO05D000152 1.9e-09 66.6 154 38.3
Thhalv10002443m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 7.3e-09 64.7 145 37.9
A02p13600 Brassica napus HOM05D000264 ORTHO05D000152 1.0e-07 60.8 146 38.4
BraA02t06419Z Brassica rapa HOM05D000264 ORTHO05D000152 1.0e-07 60.8 146 38.4
AT1G03670 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 2.6e-06 56.2 145 34.5
C02p21940 Brassica napus HOM05D000264 ORTHO05D000152 4.4e-06 55.5 141 36.2
BcaC01g06675 Brassica carinata HOM05D000264 ORTHO05D000152 9.8e-06 54.3 140 35.0
C03p36730 Brassica napus HOM05D000264 ORTHO05D000152 9.8e-06 54.3 140 35.0
BolC3t15987H Brassica oleracea HOM05D000264 ORTHO05D000152 9.8e-06 54.3 140 35.0


User provided reference genes

Program Settings