Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p52100 Brassica napus HOM05D004446 ORTHO05D005346 1.1e-71 273.1 125 100.0
BcaB03g13480 Brassica carinata HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
BcaC07g36901 Brassica carinata HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
A08p36850 Brassica napus HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
A09p67770 Brassica napus HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
A10p03060 Brassica napus HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
C05p02820 Brassica napus HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
BolC5t29065H Brassica oleracea HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
BolC8t46930H Brassica oleracea HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
BraA08t35586Z Brassica rapa HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
BraA09t42108Z Brassica rapa HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
BraA10t42579Z Brassica rapa HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
Thhalv10009042m.g Eutrema salsugineum HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
Thhalv10017386m.g Eutrema salsugineum HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
Sp1g03460 Schrenkiella parvula HOM05D004446 ORTHO05D005346 4.7e-43 177.9 97 88.7
Carub.0004s1468 Capsella rubella HOM05D004446 ORTHO05D005346 6.1e-43 177.6 97 88.7
Sp4g15520 Schrenkiella parvula HOM05D004446 ORTHO05D005346 1.0e-42 176.8 97 87.6
AL1G14310 Arabidopsis lyrata HOM05D004446 ORTHO05D005346 1.4e-42 176.4 97 87.6
AL4G28840 Arabidopsis lyrata HOM05D004446 ORTHO05D005346 1.4e-42 176.4 97 87.6
CARHR003980 Cardamine hirsuta HOM05D004446 ORTHO05D005346 3.0e-42 175.3 97 86.6
CARHR127230 Cardamine hirsuta HOM05D004446 ORTHO05D005346 3.0e-42 175.3 97 86.6
AT1G04630 Arabidopsis thaliana HOM05D004446 ORTHO05D005346 4.0e-42 174.9 97 86.6
Carub.0001s0386 Capsella rubella HOM05D004446 ORTHO05D005346 4.0e-42 174.9 97 86.6
C08p01220 Brassica napus HOM05D004446 ORTHO05D005346 5.2e-42 174.5 97 87.6
Aa31LG1G20240 Aethionema arabicum HOM05D004446 ORTHO05D005346 8.8e-42 173.7 97 85.6
Aa31LG5G4110 Aethionema arabicum HOM05D004446 ORTHO05D005346 8.8e-42 173.7 97 85.6
AT2G33220 Arabidopsis thaliana HOM05D004446 ORTHO05D005346 3.4e-41 171.8 95 87.4
Atru.chr4.1819 Acer truncatum HOM05D004446 ORTHO05D005346 2.2e-40 169.1 93 84.9
CANSAT78G0709 Cannabis sativa HOM05D004446 ORTHO05D005346 2.8e-40 168.7 93 84.9
THA.LOC104826105 Tarenaya hassleriana HOM05D004446 ORTHO05D005346 8.3e-40 167.2 97 83.5
Cpa.g.sc59.66 Carica papaya HOM05D004446 ORTHO05D005346 1.4e-39 166.4 93 83.9
CiPaw.01G206200 Carya illinoinensis HOM05D004446 ORTHO05D005346 1.4e-39 166.4 93 82.8
CiPaw.02G127900 Carya illinoinensis HOM05D004446 ORTHO05D005346 1.8e-39 166.0 93 81.7
THA.LOC104816014 Tarenaya hassleriana HOM05D004446 ORTHO05D005346 1.8e-39 166.0 97 82.5
Manes.03G155100 Manihot esculenta HOM05D004446 ORTHO05D005346 2.4e-39 165.6 93 82.8
Eucgr.H02865 Eucalyptus grandis HOM05D004446 ORTHO05D005346 4.1e-39 164.9 93 81.7
Gohir.A10G120100 Gossypium hirsutum HOM05D004446 ORTHO05D005346 4.1e-39 164.9 93 82.8
Gohir.D10G146300 Gossypium hirsutum HOM05D004446 ORTHO05D005346 4.1e-39 164.9 93 82.8
Gorai.011G163400 Gossypium raimondii HOM05D004446 ORTHO05D005346 4.1e-39 164.9 93 82.8
Medtr1g046380 Medicago truncatula HOM05D004446 ORTHO05D005346 4.1e-39 164.9 93 82.8
Sed0017441 Sechium edule HOM05D004446 ORTHO05D005346 4.1e-39 164.9 93 80.6
Gohir.D10G146200 Gossypium hirsutum HOM05D004446 ORTHO05D005346 5.4e-39 164.5 93 81.7
Gorai.011G163300 Gossypium raimondii HOM05D004446 ORTHO05D005346 5.4e-39 164.5 93 81.7
Manes.15G048500 Manihot esculenta HOM05D004446 ORTHO05D005346 5.4e-39 164.5 93 82.8
PGR044G1212 Punica granatum HOM05D004446 ORTHO05D005346 5.4e-39 164.5 93 82.8
Thecc.04G215500 Theobroma cacao HOM05D004446 ORTHO05D005346 5.4e-39 164.5 93 82.8
TPR.G23640 Trifolium pratense HOM05D004446 ORTHO05D005346 5.4e-39 164.5 93 81.7
FvH4_4g05410 Fragaria vesca HOM05D004446 ORTHO05D005346 7.0e-39 164.1 93 81.7
FAN07G2016 Fragaria x ananassa HOM05D004446 ORTHO05D005346 7.0e-39 164.1 93 81.7
FAN12G2493 Fragaria x ananassa HOM05D004446 ORTHO05D005346 7.0e-39 164.1 93 81.7
FAN12G4338 Fragaria x ananassa HOM05D004446 ORTHO05D005346 7.0e-39 164.1 93 81.7
Gohir.A10G120200 Gossypium hirsutum HOM05D004446 ORTHO05D005346 7.0e-39 164.1 93 80.6
RcHm_v2.0_Chr4g0396561 Rosa chinensis HOM05D004446 ORTHO05D005346 7.0e-39 164.1 93 81.7
Duzib212G0284 Durio zibethinus HOM05D004446 ORTHO05D005346 9.1e-39 163.7 93 81.7
ClCG06G007390 Citrullus lanatus HOM05D004446 ORTHO05D005346 1.2e-38 163.3 93 80.6
MELO3C023063.2 Cucumis melo HOM05D004446 ORTHO05D005346 1.2e-38 163.3 93 80.6
CsaV3_2G012290 Cucumis sativus L. HOM05D004446 ORTHO05D005346 1.2e-38 163.3 93 80.6
Psat6g109720 Pisum sativum HOM05D004446 ORTHO05D005346 1.2e-38 163.3 93 81.7
COL.COLO4_05729 Corchorus olitorius HOM05D004446 ORTHO05D005346 1.6e-38 162.9 93 81.7
Potri.001G054500 Populus trichocarpa HOM05D004446 ORTHO05D005346 1.6e-38 162.9 93 81.7
Ciclev10006172m.g Citrus clementina HOM05D004446 ORTHO05D005346 2.0e-38 162.5 93 81.7
MD16G1234000 Malus domestica HOM05D004446 ORTHO05D005346 3.5e-38 161.8 93 79.6
arahy.Tifrunner.gnm1.ann1.VC13RQ Arachis hypogaea HOM05D004446 ORTHO05D005346 4.5e-38 161.4 93 79.6
Glyma.20G079400 Glycine max HOM05D004446 ORTHO05D005346 5.9e-38 161.0 93 79.6
MD13G1228700 Malus domestica HOM05D004446 ORTHO05D005346 1.0e-37 160.2 93 78.5
Lalb_Chr01g0011251 Lupinus albus HOM05D004446 ORTHO05D005346 1.3e-37 159.8 93 78.5
Phvul.007G238600 Phaseolus vulgaris HOM05D004446 ORTHO05D005346 1.3e-37 159.8 93 77.4
Potri.003G173800 Populus trichocarpa HOM05D004446 ORTHO05D005346 1.3e-37 159.8 93 79.6
Ca_11789_v3 Cicer arietinum L. HOM05D004446 ORTHO05D005346 1.7e-37 159.5 93 79.6
Lj6g0002383 Lotus japonicus HOM05D004446 ORTHO05D005346 1.7e-37 159.5 93 78.5
Nn2g14612 Nelumbo nucifera HOM05D004446 ORTHO05D005346 2.3e-37 159.1 93 80.6
Prupe.1G056200 Prunus persica HOM05D004446 ORTHO05D005346 2.3e-37 159.1 93 78.5
VMungo0720G0669 Vigna mungo HOM05D004446 ORTHO05D005346 2.3e-37 159.1 93 78.5
Glyma.10G128100 Glycine max HOM05D004446 ORTHO05D005346 2.9e-37 158.7 93 78.5
Lalb_Chr03g0036811 Lupinus albus HOM05D004446 ORTHO05D005346 2.9e-37 158.7 92 79.3
TWI73G1246 Tripterygium wilfordii HOM05D004446 ORTHO05D005346 2.9e-37 158.7 93 78.5
AUR62035332 Chenopodium quinoa HOM05D004446 ORTHO05D005346 3.8e-37 158.3 93 79.6
TWI09G0335 Tripterygium wilfordii HOM05D004446 ORTHO05D005346 6.5e-37 157.5 93 78.5
CSS0043422 Camellia sinensis var. sinensis HOM05D004446 ORTHO05D005346 8.6e-37 157.1 93 78.5
CSS0044163 Camellia sinensis var. sinensis HOM05D004446 ORTHO05D005346 8.6e-37 157.1 93 78.5
HanXRQChr06g0183261 Helianthus annuus HOM05D004446 ORTHO05D005346 8.6e-37 157.1 93 77.4
SalBow2G1310 Salvia bowleyana HOM05D004446 ORTHO05D005346 8.6e-37 157.1 93 77.4
vmacro00521 Vaccinium macrocarpon HOM05D004446 ORTHO05D005346 8.6e-37 157.1 93 77.4
arahy.Tifrunner.gnm1.ann1.Q5T5LU Arachis hypogaea HOM05D004446 ORTHO05D005346 1.1e-36 156.8 91 79.1
MSTRG.24643 Avicennia marina HOM05D004446 ORTHO05D005346 1.1e-36 156.8 93 77.4
Cc00_g09360 Coffea canephora HOM05D004446 ORTHO05D005346 1.1e-36 156.8 93 79.6
Nitab4.5_0000451g0180 Nicotiana tabacum HOM05D004446 ORTHO05D005346 1.5e-36 156.4 93 78.5
Nitab4.5_0018759g0010 Nicotiana tabacum HOM05D004446 ORTHO05D005346 1.5e-36 156.4 93 78.5
Peaxi162Scf00047g01619 Petunia axillaris HOM05D004446 ORTHO05D005346 1.5e-36 156.4 93 78.5
SGA_v2.0_scaffold155G37240 Striga asiatica HOM05D004446 ORTHO05D005346 1.5e-36 156.4 93 77.4
EL10Ac3g06748 Beta vulgaris HOM05D004446 ORTHO05D005346 1.9e-36 156.0 93 78.5
Lsat_1_v5_gn_2_41880 Lactuca sativa HOM05D004446 ORTHO05D005346 1.9e-36 156.0 92 77.2
Sc19g0005800 Simmondsia chinensis HOM05D004446 ORTHO05D005346 1.9e-36 156.0 93 78.5
ECA238G1521 Erigeron canadensis HOM05D004446 ORTHO05D005346 2.5e-36 155.6 93 76.3
HanXRQChr14g0434271 Helianthus annuus HOM05D004446 ORTHO05D005346 2.5e-36 155.6 93 76.3
A03p18650 Brassica napus HOM05D004446 ORTHO05D005346 3.3e-36 155.2 73 98.6
BraA03t11124Z Brassica rapa HOM05D004446 ORTHO05D005346 3.3e-36 155.2 73 98.6
Nn5g27558 Nelumbo nucifera HOM05D004446 ORTHO05D005346 3.3e-36 155.2 93 77.4
Hund19262 Selenicereus undatus HOM05D004446 ORTHO05D005346 3.3e-36 155.2 93 77.4
CDE04G3627 Ceratophyllum demersum HOM05D004446 ORTHO05D005346 4.2e-36 154.8 93 78.5
Solyc09g091170.4 Solanum lycopersicum HOM05D004446 ORTHO05D005346 4.2e-36 154.8 93 77.4
Sopen09g034140 Solanum pennellii HOM05D004446 ORTHO05D005346 4.2e-36 154.8 93 77.4
Actinidia35938 Actinidia chinensis HOM05D004446 ORTHO05D005346 7.2e-36 154.1 93 75.3
Aqoxy3G02680 Aquilegia oxysepala HOM05D004446 ORTHO05D005346 7.2e-36 154.1 93 78.5
PGSC0003DMG400011587 Solanum tuberosum HOM05D004446 ORTHO05D005346 7.2e-36 154.1 93 77.4
QL06p022604 Quercus lobata HOM05D004446 ORTHO05D005346 9.5e-36 153.7 92 75.0
TAR362G0142 Trochodendron aralioides HOM05D004446 ORTHO05D005346 9.5e-36 153.7 93 76.3
DCAR_027363 Daucus carota HOM05D004446 ORTHO05D005346 1.2e-35 153.3 93 75.3
TAR365G0553 Trochodendron aralioides HOM05D004446 ORTHO05D005346 1.6e-35 152.9 93 77.4
Zm00001eb008370 Zea mays HOM05D004446 ORTHO05D005346 1.6e-35 152.9 93 78.5
ATR0736G077 Amborella trichopoda HOM05D004446 ORTHO05D005346 2.8e-35 152.1 93 76.3
BolC3t14561H Brassica oleracea HOM05D004446 ORTHO05D005346 2.8e-35 152.1 73 95.9
vmacro22557 Vaccinium macrocarpon HOM05D004446 ORTHO05D005346 2.8e-35 152.1 102 70.6
TAR633G2153 Trochodendron aralioides HOM05D004446 ORTHO05D005346 4.7e-35 151.4 91 78.0
HPP92_008960 Vanilla planifolia HOM05D004446 ORTHO05D005346 4.7e-35 151.4 93 74.2
Rhsim09G0047000 Rhododendron simsii HOM05D004446 ORTHO05D005346 6.1e-35 151.0 100 72.0
RhsimUnG0181300 Rhododendron simsii HOM05D004446 ORTHO05D005346 6.1e-35 151.0 100 72.0
PSO063G0015 Papaver somniferum HOM05D004446 ORTHO05D005346 1.0e-34 150.2 92 76.1
PSO782G0825 Papaver somniferum HOM05D004446 ORTHO05D005346 1.0e-34 150.2 92 76.1
Sabra01G0039000 Salix brachista HOM05D004446 ORTHO05D005346 1.4e-34 149.8 74 90.5
Zm00001eb401250 Zea mays HOM05D004446 ORTHO05D005346 1.8e-34 149.4 93 77.4
Lsat_1_v5_gn_2_41141 Lactuca sativa HOM05D004446 ORTHO05D005346 3.0e-34 148.7 90 75.6
Hma1.2p1_2329F.1_g320020 Hydrangea macrophylla HOM05D004446 ORTHO05D005346 2.0e-33 146.0 121 62.0
Haze_11535 Corylus avellana HOM05D004446 ORTHO05D005346 2.6e-33 145.6 77 84.4
Dinv27149 Davidia involucrata HOM05D004446 ORTHO05D005346 1.7e-32 142.9 85 80.0
Oeu008823.1 Olea europaea HOM05D004446 ORTHO05D005346 1.7e-32 142.9 75 88.0
CAN.G1588.2 Capsicum annuum HOM05D004446 ORTHO05D005346 2.2e-32 142.5 75 84.0
Sabra03G0127300 Salix brachista HOM05D004446 ORTHO05D005346 2.8e-32 142.1 73 86.3
GSVIVG01028486001 Vitis vinifera HOM05D004446 ORTHO05D005346 2.8e-32 142.1 87 77.0
RhsimUnG0181500 Rhododendron simsii HOM05D004446 ORTHO05D005346 6.3e-32 141.0 76 81.6
Dinv38297 Davidia involucrata HOM05D004446 ORTHO05D005346 1.1e-31 140.2 83 79.5
AUR62035909 Chenopodium quinoa HOM05D004446 ORTHO05D005346 1.4e-31 139.8 84 78.6
Migut.G00605 Erythranthe guttata HOM05D004446 ORTHO05D005346 1.8e-31 139.4 93 73.1
Os03g0192400 Oryza sativa ssp. japonica HOM05D004446 ORTHO05D005346 2.7e-30 135.6 88 72.7
unitig_748.g8289 Utricularia gibba HOM05D002765 ORTHO05D003083 7.8e-30 134.0 86 73.3
SEGI_11387 Sequoiadendron giganteum HOM05D004446 ORTHO05D005346 1.0e-29 133.7 93 65.6
BcaC01g05851 Brassica carinata HOM05D004446 ORTHO05D005346 3.8e-29 131.7 89 77.5
BcaC07g42166 Brassica carinata HOM05D004446 ORTHO05D005346 3.3e-28 128.6 97 70.1
Pp3c16_2570 Physcomitrium patens HOM05D004446 ORTHO05D005346 9.8e-25 117.1 87 65.5
Pp3c5_4240 Physcomitrium patens HOM05D004446 ORTHO05D005346 9.8e-25 117.1 86 66.3
Cc05_g03600 Coffea canephora HOM05D004446 ORTHO05D005346 9.2e-23 110.5 75 70.7
AagrBONN_evm.TU.Sc2ySwM_344.5082 Anthoceros agrestis HOM05D004446 ORTHO05D005346 2.0e-22 109.4 93 59.1
Actinidia25089 Actinidia chinensis HOM05D004446 ORTHO05D005346 7.8e-22 107.5 126 46.0
Mapoly0001s0090 Marchantia polymorpha HOM05D004446 ORTHO05D005346 7.8e-22 107.5 87 58.6
Ah.13g075110 Amaranthus hybridus HOM05D004446 ORTHO05D005346 3.0e-21 105.5 93 54.8
BolC8t52743H Brassica oleracea HOM05D004446 ORTHO05D005346 3.0e-21 105.5 70 78.6
CBR_g9031 Chara braunii HOM05D004446 ORTHO05D005346 1.5e-20 103.2 84 60.7
MBI10_g35300_MAGBIO Magnolia biondii HOM05D004446 ORTHO05D005346 5.8e-17 91.3 46 82.6
MCO16G128 Micromonas commoda HOM05D004446 ORTHO05D005346 7.8e-14 80.9 111 42.3
SMO364G0175 Selaginella moellendorffii HOM05D004446 ORTHO05D005346 1.2e-11 73.6 88 42.0
CSS0009466 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-07 60.5 30 83.3


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