Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g42151 Brassica carinata HOM05D009593 ORTHO05D011753 9.0e-37 156.4 77 100.0
C08p51980 Brassica napus HOM05D009593 ORTHO05D011753 9.0e-37 156.4 77 100.0
BcaC07g42152 Brassica carinata HOM05D009593 ORTHO05D011753 1.2e-33 146.0 77 93.5
BraA09t42093Z Brassica rapa HOM05D009593 ORTHO05D011753 1.2e-33 146.0 77 93.5
A09p67610 Brassica napus HOM05D009593 ORTHO05D011753 2.1e-33 145.2 77 93.5
BcaB02g06883 Brassica carinata HOM05D009593 ORTHO05D011753 2.6e-28 128.3 78 83.3
BcaC05g24415 Brassica carinata HOM05D009593 ORTHO05D011753 3.4e-28 127.9 77 85.7
BcaC05g24417 Brassica carinata HOM05D009593 ORTHO05D011753 4.5e-28 127.5 78 84.6
C05p03260 Brassica napus HOM05D009593 ORTHO05D011753 4.5e-28 127.5 78 84.6
BolC5t29107H Brassica oleracea HOM05D009593 ORTHO05D011753 4.5e-28 127.5 78 84.6
A10p03570 Brassica napus HOM05D009593 ORTHO05D011753 7.6e-28 126.7 78 82.1
BraA10t42634Z Brassica rapa HOM05D009593 ORTHO05D011753 7.6e-28 126.7 78 82.1
Thhalv10009388m.g Eutrema salsugineum HOM05D009593 ORTHO05D011753 6.5e-27 123.6 74 82.4
Sp1g03940 Schrenkiella parvula HOM05D009593 ORTHO05D011753 3.3e-23 111.3 64 84.4
AT1G05065 Arabidopsis thaliana HOM05D009593 ORTHO05D011753 5.7e-23 110.5 80 77.5
CARHR004530 Cardamine hirsuta HOM05D009593 ORTHO05D011753 1.4e-21 105.9 77 72.7
Carub.0001s0434 Capsella rubella HOM05D009593 ORTHO05D011753 1.9e-18 95.5 84 69.0
Aa31LG8G1890 Aethionema arabicum HOM05D009593 ORTHO05D011753 1.3e-16 89.4 82 64.6
Thhalv10017495m.g Eutrema salsugineum HOM05D009593 ORTHO05D011753 8.5e-11 70.1 76 57.9
CARHR126470 Cardamine hirsuta HOM05D009593 ORTHO05D011753 5.5e-10 67.4 76 57.9
Carub.0004s1395 Capsella rubella HOM05D009593 ORTHO05D011753 3.6e-09 64.7 73 58.9
BolC3t16138H Brassica oleracea HOM05D009593 ORTHO05D011753 6.1e-09 63.9 33 97.0
BcaB02g10457 Brassica carinata HOM05D009593 ORTHO05D011753 7.9e-09 63.5 72 52.8
BcaB02g06884 Brassica carinata HOM05D009593 ORTHO05D011753 5.1e-08 60.8 43 74.4
AL4G28020 Arabidopsis lyrata HOM05D009593 ORTHO05D011753 3.3e-07 58.2 57 57.9
C04p17060 Brassica napus HOM05D009593 ORTHO05D011753 7.4e-07 57.0 73 50.7
A05p13310 Brassica napus HOM05D009593 ORTHO05D011753 9.7e-07 56.6 72 47.2
BcaC01g05902 Brassica carinata HOM05D009593 ORTHO05D011753 8.2e-06 53.5 76 48.7


User provided reference genes

Program Settings