Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p50480 Brassica napus HOM05D003240 ORTHO05D101800 9.2e-142 506.9 261 100.0
BcaC06g32208 Brassica carinata HOM05D003240 ORTHO05D021783 2.9e-26 123.2 85 80.0
BcaC09g47943 Brassica carinata HOM05D003240 ORTHO05D021783 1.4e-25 120.9 66 92.4
C09p01740 Brassica napus HOM05D003240 ORTHO05D021783 1.2e-24 117.9 66 90.9
A09p39950 Brassica napus HOM05D003240 ORTHO05D021783 1.0e-23 114.8 66 87.9
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 7.5e-19 98.6 85 67.1
C09p63070 Brassica napus HOM05D003240 ORTHO05D023867 9.8e-19 98.2 86 67.4
BcaC05g26508 Brassica carinata HOM05D003240 ORTHO05D023867 6.4e-18 95.5 87 63.2
BolC5t31284H Brassica oleracea HOM05D003240 ORTHO05D023867 6.4e-18 95.5 87 63.2
BolC4t25249H Brassica oleracea HOM05D003240 ORTHO05D104461 8.3e-18 95.1 74 71.6
BcaC07g39783 Brassica carinata HOM05D003240 ORTHO05D023867 2.4e-17 93.6 87 63.2
C03p92080 Brassica napus HOM05D003240 ORTHO05D024027 5.4e-17 92.4 112 54.5
BolC1t05880H Brassica oleracea HOM05D003240 ORTHO05D024027 5.4e-17 92.4 84 64.3
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 9.2e-17 91.7 86 64.0
C06p44710 Brassica napus HOM05D003240 ORTHO05D017503 9.2e-17 91.7 74 70.3
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 9.2e-17 91.7 86 64.0
BolC4t25181H Brassica oleracea HOM05D003240 ORTHO05D107020 1.2e-16 91.3 97 58.8
BcaC03g18230 Brassica carinata HOM05D003240 ORTHO05D024027 1.6e-16 90.9 73 67.1
BcaC07g36928 Brassica carinata HOM05D003240 ORTHO05D024027 1.6e-16 90.9 86 61.6
BcaC08g43497 Brassica carinata HOM05D003240 ORTHO05D017503 2.7e-16 90.1 74 71.6
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 3.5e-16 89.7 85 61.2
C08p00720 Brassica napus HOM05D003240 ORTHO05D016738 4.6e-16 89.4 115 52.2
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 6.0e-16 89.0 94 56.4
C02p62990 Brassica napus HOM05D003240 ORTHO05D042544 7.8e-16 88.6 121 51.2
BolC2t12373H Brassica oleracea HOM05D003240 ORTHO05D042544 7.8e-16 88.6 121 51.2
BcaC05g26272 Brassica carinata HOM05D003240 ORTHO05D032928 1.7e-15 87.4 82 63.4
C01p00460 Brassica napus HOM05D003240 ORTHO05D016738 3.9e-15 86.3 115 49.6
A08p21510 Brassica napus HOM05D003240 ORTHO05D016738 6.6e-15 85.5 110 50.0
BraA08t34100Z Brassica rapa HOM05D003240 ORTHO05D016738 6.6e-15 85.5 110 50.0
BcaB01g03865 Brassica carinata HOM05D003240 ORTHO05D094508 1.1e-14 84.7 99 54.5
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 3.3e-14 83.2 62 72.6
BraA03t10651Z Brassica rapa HOM05D003240 ORTHO05D032928 3.3e-14 83.2 62 72.6
BcaC02g08188 Brassica carinata HOM05D003240 ORTHO05D017535 4.3e-14 82.8 115 49.6
C04p57490 Brassica napus HOM05D003240 ORTHO05D017535 4.3e-14 82.8 115 49.6
C03p56700 Brassica napus HOM05D003240 ORTHO05D016738 5.6e-14 82.4 128 45.3
BolC3t17954H Brassica oleracea HOM05D003240 ORTHO05D016738 5.6e-14 82.4 128 45.3
A09p11060 Brassica napus HOM05D003240 ORTHO05D019881 7.3e-14 82.0 84 60.7
BolC8t51497H Brassica oleracea HOM05D003240 ORTHO05D016738 7.3e-14 82.0 128 44.5
BcaB02g07983 Brassica carinata HOM05D003240 ORTHO05D017503 1.6e-13 80.9 87 59.8
C07p46390 Brassica napus HOM05D003240 ORTHO05D016738 1.6e-13 80.9 128 44.5
BolC7t45157H Brassica oleracea HOM05D003240 ORTHO05D016738 1.6e-13 80.9 128 44.5
BcaC08g47278 Brassica carinata HOM05D003240 ORTHO05D017535 2.8e-13 80.1 62 71.0
C01p20310 Brassica napus HOM05D002197 ORTHO05D002462 2.8e-13 80.1 62 71.0
C06p50180 Brassica napus HOM05D003240 ORTHO05D017535 2.8e-13 80.1 115 48.7
BolC6t40058H Brassica oleracea HOM05D003240 ORTHO05D017535 2.8e-13 80.1 115 48.7
C09p73110 Brassica napus HOM05D003240 ORTHO05D040560 1.1e-12 78.2 120 49.2
BraA03t13996Z Brassica rapa HOM05D012445 ORTHO05D018631 2.0e-11 73.9 65 66.2
BraA09t36164Z Brassica rapa HOM05D012445 ORTHO05D018631 2.0e-11 73.9 65 66.2
BraA04t17515Z Brassica rapa HOM05D012445 ORTHO05D018631 7.6e-11 72.0 63 66.7
BcaNung01267 Brassica carinata HOM05D003240 ORTHO05D016738 9.9e-11 71.6 86 55.8
BcaNung03688 Brassica carinata HOM05D003240 ORTHO05D019881 9.9e-11 71.6 134 42.5
C07p48040 Brassica napus HOM05D011346 ORTHO05D015475 9.9e-11 71.6 64 67.2
C06p51070 Brassica napus HOM05D011346 ORTHO05D015475 1.3e-10 71.2 60 70.0
C07p62190 Brassica napus HOM05D003240 ORTHO05D019881 1.3e-10 71.2 107 47.7
BraA02t06117Z Brassica rapa HOM05D003240 ORTHO05D019881 2.9e-10 70.1 136 41.2
BolC1t01225H Brassica oleracea HOM05D011346 ORTHO05D015475 4.9e-10 69.3 58 69.0
BraA01t01392Z Brassica rapa HOM05D011346 ORTHO05D015475 4.9e-10 69.3 60 66.7
BolC4t22353H Brassica oleracea HOM05D011346 ORTHO05D106028 8.4e-10 68.6 59 67.8
BolC9t53578H Brassica oleracea HOM05D011346 ORTHO05D043120 8.4e-10 68.6 60 66.7
C08p03380 Brassica napus HOM05D008956 ORTHO05D016720 1.1e-09 68.2 65 60.0
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 1.1e-09 68.2 64 62.5
BNapus_Darmor_BZH_scaffold_109p00210 Brassica napus HOM05D011346 ORTHO05D015475 1.4e-09 67.8 60 65.0
C04p07300 Brassica napus HOM05D011346 ORTHO05D015475 1.4e-09 67.8 59 67.8
BolC6t39565H Brassica oleracea HOM05D008956 ORTHO05D013254 1.4e-09 67.8 64 64.1
BcaB08g36836 Brassica carinata HOM05D008956 ORTHO05D090626 1.9e-09 67.4 65 53.8
BraA09t39506Z Brassica rapa HOM05D011346 ORTHO05D043120 1.9e-09 67.4 60 65.0
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 3.2e-09 66.6 65 58.5
C04p69810 Brassica napus HOM05D011346 ORTHO05D099510 3.2e-09 66.6 60 66.7
C07p36910 Brassica napus HOM05D008956 ORTHO05D013254 4.1e-09 66.2 64 62.5
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 4.1e-09 66.2 64 62.5
BolC7t44203H Brassica oleracea HOM05D008956 ORTHO05D013254 4.1e-09 66.2 64 62.5
C04p03050 Brassica napus HOM05D011346 ORTHO05D015475 7.1e-09 65.5 60 66.7
BolC4t21947H Brassica oleracea HOM05D011346 ORTHO05D015475 7.1e-09 65.5 60 66.7
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 9.2e-09 65.1 65 56.9
C03p51870 Brassica napus HOM05D012445 ORTHO05D018631 1.2e-08 64.7 65 61.5
C06p45070 Brassica napus HOM05D008956 ORTHO05D013254 1.2e-08 64.7 63 61.9
C09p65770 Brassica napus HOM05D008956 ORTHO05D013254 1.2e-08 64.7 64 60.9
BolC9t59399H Brassica oleracea HOM05D008956 ORTHO05D105535 1.2e-08 64.7 64 60.9
C06p08310 Brassica napus HOM05D008956 ORTHO05D016720 1.6e-08 64.3 65 56.9
C06p40860 Brassica napus HOM05D012445 ORTHO05D041381 1.6e-08 64.3 69 56.5
BraA02t08299Z Brassica rapa HOM05D002233 ORTHO05D002299 1.6e-08 64.3 66 62.1
BraA03t14966Z Brassica rapa HOM05D008956 ORTHO05D016720 1.6e-08 64.3 66 59.1
BolC6t36746H Brassica oleracea HOM05D012445 ORTHO05D040835 2.1e-08 63.9 65 60.0
BolC6t39347H Brassica oleracea HOM05D012445 ORTHO05D041381 2.1e-08 63.9 69 56.5
C06p08520 Brassica napus HOM05D011346 ORTHO05D015475 2.7e-08 63.5 60 65.0
C03p03630 Brassica napus HOM05D008956 ORTHO05D013254 3.5e-08 63.2 64 60.9
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 3.5e-08 63.2 65 58.5
BcaC04g24027 Brassica carinata HOM05D012417 ORTHO05D024193 7.8e-08 62.0 65 61.5
C01p15510 Brassica napus HOM05D003240 ORTHO05D103301 7.8e-08 62.0 112 49.1
C03p42360 Brassica napus HOM05D008956 ORTHO05D013254 7.8e-08 62.0 65 53.8
C06p39900 Brassica napus HOM05D008956 ORTHO05D101413 7.8e-08 62.0 65 55.4
C09p16440 Brassica napus HOM05D012445 ORTHO05D040835 7.8e-08 62.0 65 60.0
C07p35510 Brassica napus HOM05D008956 ORTHO05D016720 1.0e-07 61.6 65 55.4
BolC7t44074H Brassica oleracea HOM05D008956 ORTHO05D016720 1.0e-07 61.6 65 55.4
BcaNung03344 Brassica carinata HOM05D003240 ORTHO05D017535 1.3e-07 61.2 62 61.3
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 3.9e-07 59.7 65 56.9
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 1.5e-06 57.8 62 61.3
BcaC03g13399 Brassica carinata HOM05D012417 ORTHO05D024193 1.5e-06 57.8 65 58.5
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 1.5e-06 57.8 65 58.5
BolC1t05719H Brassica oleracea HOM05D000205 ORTHO05D000438 1.9e-06 57.4 65 55.4
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 3.3e-06 56.6 64 56.2
BcaC06g33134 Brassica carinata HOM05D003240 ORTHO05D094083 3.3e-06 56.6 62 61.3
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 3.3e-06 56.6 65 55.4
A08p22750 Brassica napus HOM05D010232 ORTHO05D016018 3.3e-06 56.6 82 50.0
C07p30560 Brassica napus HOM05D003240 ORTHO05D039579 3.3e-06 56.6 72 54.2
BolC3t17473H Brassica oleracea HOM05D012445 ORTHO05D018631 3.3e-06 56.6 56 60.7
BraA08t34244Z Brassica rapa HOM05D010232 ORTHO05D016018 3.3e-06 56.6 82 50.0
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 4.3e-06 56.2 64 54.7
BcaB07g33645 Brassica carinata HOM05D010893 ORTHO05D014123 4.3e-06 56.2 63 54.0
BcaC02g11293 Brassica carinata HOM05D008956 ORTHO05D013254 4.3e-06 56.2 56 58.9
BcaC02g12116 Brassica carinata HOM05D003240 ORTHO05D039579 4.3e-06 56.2 72 54.2
BcaC06g33773 Brassica carinata HOM05D013416 ORTHO05D024230 4.3e-06 56.2 72 54.2
C03p21650 Brassica napus HOM05D012417 ORTHO05D024193 4.3e-06 56.2 65 56.9
BolC3t14549H Brassica oleracea HOM05D012417 ORTHO05D024193 4.3e-06 56.2 65 56.9
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 7.3e-06 55.5 65 53.8
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 7.3e-06 55.5 62 56.5
C05p62330 Brassica napus HOM05D003240 ORTHO05D019895 7.3e-06 55.5 64 59.4
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 9.6e-06 55.1 64 54.7
BcaC05g27248 Brassica carinata HOM05D010232 ORTHO05D023893 9.6e-06 55.1 64 60.9


User provided reference genes

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