Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 7.2e-75 283.9 148 100.0
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 7.2e-75 283.9 148 100.0
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 7.2e-75 283.9 148 100.0
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 3.1e-70 268.5 148 95.3
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 6.9e-70 267.3 148 93.9
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 1.2e-69 266.5 148 95.3
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 1.2e-69 266.5 148 95.3
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 2.2e-68 262.3 143 95.8
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 2.9e-68 261.9 148 93.2
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 1.4e-67 259.6 148 93.9
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 3.6e-66 255.0 149 92.6
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 3.0e-65 251.9 148 90.5
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 3.9e-65 251.5 148 90.5
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 5.7e-64 247.7 148 89.9
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 7.0e-62 240.7 148 87.2
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 2.9e-60 235.3 148 81.1
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 3.8e-60 235.0 148 84.5
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 9.4e-59 230.3 148 82.4
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 1.6e-58 229.6 148 81.1
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 4.7e-58 228.0 148 78.4
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 1.4e-57 226.5 148 79.7
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 3.0e-57 225.3 148 80.4
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 3.0e-57 225.3 148 81.1
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 3.0e-57 225.3 148 78.4
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 1.7e-55 219.5 148 76.4
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 1.7e-55 219.5 148 77.7
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 3.7e-55 218.4 148 77.0
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 4.8e-55 218.0 148 76.4
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 6.3e-55 217.6 148 75.0
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 1.4e-54 216.5 148 76.4
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 3.1e-54 215.3 148 74.3
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 5.3e-54 214.5 148 77.0
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 1.2e-53 213.4 148 74.3
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 1.2e-53 213.4 148 74.3
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 1.6e-53 213.0 148 75.7
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 2.0e-53 212.6 148 75.0
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 2.7e-53 212.2 150 74.7
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 2.7e-53 212.2 148 76.4
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 4.5e-53 211.5 148 76.4
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 5.9e-53 211.1 148 75.0
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 5.9e-53 211.1 148 75.7
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 7.7e-53 210.7 148 75.0
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 7.7e-53 210.7 148 74.3
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 7.7e-53 210.7 148 75.0
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 1.0e-52 210.3 148 74.3
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 1.0e-52 210.3 148 73.0
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 1.3e-52 209.9 148 75.0
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 1.3e-52 209.9 148 73.0
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 1.3e-52 209.9 148 74.3
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 1.3e-52 209.9 148 75.0
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 1.7e-52 209.5 133 79.7
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 1.7e-52 209.5 148 73.6
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 2.2e-52 209.1 148 76.4
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 3.8e-52 208.4 148 75.0
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 3.8e-52 208.4 148 72.3
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 3.8e-52 208.4 148 72.3
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 5.0e-52 208.0 148 76.4
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 5.0e-52 208.0 148 74.3
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 6.5e-52 207.6 148 74.3
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 1.1e-51 206.8 148 75.0
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 1.1e-51 206.8 148 75.0
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 1.1e-51 206.8 148 73.6
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 1.1e-51 206.8 148 73.0
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 1.5e-51 206.5 148 72.3
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 1.5e-51 206.5 148 72.3
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 1.5e-51 206.5 148 73.0
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 1.9e-51 206.1 148 73.6
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 2.5e-51 205.7 133 78.2
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 2.5e-51 205.7 137 79.6
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 4.2e-51 204.9 150 74.7
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 4.2e-51 204.9 150 74.7
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 4.2e-51 204.9 148 73.0
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 5.5e-51 204.5 148 73.6
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 5.5e-51 204.5 148 73.6
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 9.4e-51 203.8 148 72.3
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 1.2e-50 203.4 142 74.6
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 1.2e-50 203.4 147 72.8
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 2.1e-50 202.6 148 69.6
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 2.7e-50 202.2 148 70.3
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 3.6e-50 201.8 148 73.6
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 3.6e-50 201.8 144 75.0
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 4.7e-50 201.4 148 73.0
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 4.7e-50 201.4 148 70.3
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 6.1e-50 201.1 149 74.5
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 6.1e-50 201.1 135 79.3
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 8.0e-50 200.7 152 71.7
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 8.0e-50 200.7 148 72.3
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 1.0e-49 200.3 148 70.9
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 1.0e-49 200.3 148 72.3
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 1.4e-49 199.9 133 75.9
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 1.8e-49 199.5 110 87.3
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 5.2e-49 198.0 148 71.6
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 5.2e-49 198.0 148 70.9
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 6.8e-49 197.6 169 65.7
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 6.8e-49 197.6 148 71.6
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 1.5e-48 196.4 172 62.8
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 1.5e-48 196.4 148 71.6
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 1.5e-48 196.4 148 70.9
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 2.0e-48 196.1 149 71.1
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 2.0e-48 196.1 149 73.8
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.6e-48 195.7 110 84.5
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 4.4e-48 194.9 117 83.8
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 9.8e-48 193.7 148 67.6
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 9.8e-48 193.7 148 68.9
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 9.8e-48 193.7 148 69.6
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 4.8e-47 191.4 149 69.1
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 6.3e-47 191.0 148 70.3
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 8.3e-47 190.7 148 69.6
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 1.8e-46 189.5 147 68.7
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 3.1e-46 188.7 224 53.1
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 3.1e-46 188.7 148 68.9
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 3.1e-46 188.7 148 68.9
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 3.1e-46 188.7 115 80.9
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 1.2e-45 186.8 148 68.2
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.3e-44 183.3 148 68.2
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 2.3e-44 182.6 148 66.2
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 6.5e-44 181.0 148 65.5
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 1.1e-43 180.3 135 70.4
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 3.3e-43 178.7 146 66.4
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.0e-41 173.7 112 75.9
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 1.4e-41 173.3 179 56.4
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.6e-40 169.1 171 55.0
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 1.1e-38 163.7 92 85.9
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 9.2e-38 160.6 95 83.2
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 3.5e-37 158.7 90 84.4
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 7.8e-37 157.5 88 86.4
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 5.0e-36 154.8 114 71.9
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 1.9e-35 152.9 112 73.2
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 5.2e-33 144.8 113 70.8
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 2.0e-29 132.9 120 53.3
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 1.3e-28 130.2 102 67.6
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 5.0e-28 128.3 114 65.8
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 2.5e-27 125.9 108 58.3
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 1.5e-24 116.7 108 56.5
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 3.4e-24 115.5 152 50.0
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 2.9e-23 112.5 63 87.3
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 4.6e-21 105.1 74 70.3
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 1.0e-20 104.0 60 86.7
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 1.3e-20 103.6 101 57.4
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 7.3e-19 97.8 113 53.1
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 7.3e-19 97.8 86 55.8
A06p04960 Brassica napus HOM05D005594 ORTHO05D006403 8.1e-18 94.4 59 86.4
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 1.4e-14 83.6 140 41.4
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 1.3e-12 77.0 125 38.4
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 5.1e-12 75.1 49 75.5
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 4.3e-11 72.0 63 55.6
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 1.2e-08 63.9 46 67.4
BcaC02g11004 Brassica carinata HOM05D004802 ORTHO05D005591 4.4e-08 62.0 84 42.9
C04p22280 Brassica napus HOM05D004802 ORTHO05D020149 9.9e-08 60.8 43 72.1
Cfa024847 Carpinus fangiana HOM05D004802 ORTHO05D005591 2.9e-07 59.3 72 45.8
CSS0004783 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 8.4e-07 57.8 63 54.0
BolC3t13075H Brassica oleracea HOM05D004802 ORTHO05D005591 1.1e-06 57.4 29 86.2
BcaB02g06631 Brassica carinata HOM05D004802 ORTHO05D005591 1.4e-06 57.0 42 69.0


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