Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p49590 Brassica napus HOM05D004904 ORTHO05D015396 3.9e-30 134.0 63 100.0
BcaC07g41901 Brassica carinata HOM05D004904 ORTHO05D015396 2.5e-13 78.2 43 76.7
BcaC07g41902 Brassica carinata HOM05D004904 ORTHO05D015396 2.5e-13 78.2 43 76.7
A09p65560 Brassica napus HOM05D004904 ORTHO05D015396 2.5e-13 78.2 43 76.7
C08p49560 Brassica napus HOM05D004904 ORTHO05D015396 2.5e-13 78.2 43 76.7
C08p49610 Brassica napus HOM05D004904 ORTHO05D015396 2.5e-13 78.2 43 76.7
BolC8t52492H Brassica oleracea HOM05D004904 ORTHO05D015396 2.5e-13 78.2 43 76.7
BraA09t41901Z Brassica rapa HOM05D004904 ORTHO05D015396 8.2e-12 73.2 45 73.3
BraA09t36421Z Brassica rapa HOM05D004904 ORTHO05D010762 3.6e-07 57.8 43 53.5
A09p07710 Brassica napus HOM05D004904 ORTHO05D010762 7.9e-07 56.6 39 56.4
Carub.0007s3224 Capsella rubella HOM05D004904 ORTHO05D010762 1.4e-06 55.8 43 55.8
BcaC04g23408 Brassica carinata HOM05D004904 ORTHO05D010762 1.8e-06 55.5 39 56.4
C09p08630 Brassica napus HOM05D004904 ORTHO05D010762 1.8e-06 55.5 39 56.4
BolC9t53774H Brassica oleracea HOM05D004904 ORTHO05D010762 1.8e-06 55.5 39 56.4
Thhalv10005414m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 5.1e-06 53.9 39 59.0
AT5G39493 Arabidopsis thaliana HOM05D004904 ORTHO05D010762 6.7e-06 53.5 48 47.9
Thhalv10005700m.g Eutrema salsugineum HOM05D004904 ORTHO05D010762 6.7e-06 53.5 41 56.1
A10p15680 Brassica napus HOM05D004904 ORTHO05D010762 8.8e-06 53.1 39 53.8
C09p50630 Brassica napus HOM05D004904 ORTHO05D010762 8.8e-06 53.1 39 53.8
BolC9t57916H Brassica oleracea HOM05D004904 ORTHO05D010762 8.8e-06 53.1 39 53.8
BraA10t43666Z Brassica rapa HOM05D004904 ORTHO05D010762 8.8e-06 53.1 39 53.8
Carub.0002s0376 Capsella rubella HOM05D004904 ORTHO05D015396 8.8e-06 53.1 46 50.0


User provided reference genes

Program Settings