Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p49490 Brassica napus HOM05D009911 ORTHO05D009712 4.2e-78 294.7 153 100.0
BcaC07g41882 Brassica carinata HOM05D009911 ORTHO05D009712 7.4e-75 283.9 153 98.0
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 2.5e-46 189.1 175 61.7
C05p07380 Brassica napus HOM05D009911 ORTHO05D009712 4.7e-45 184.9 175 61.1
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 1.0e-44 183.7 175 59.4
Sp1g07980 Schrenkiella parvula HOM05D009911 ORTHO05D009712 1.0e-44 183.7 173 59.5
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 1.5e-43 179.9 175 58.3
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 1.9e-38 162.9 175 52.6
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 4.3e-38 161.8 172 52.9
BcaC07g41884 Brassica carinata HOM05D009911 ORTHO05D009712 2.3e-36 156.0 92 87.0
AT1G09370 Arabidopsis thaliana HOM05D009911 ORTHO05D009712 3.4e-35 152.1 176 50.0
BraA06t23818Z Brassica rapa HOM05D009911 ORTHO05D009712 7.5e-35 151.0 174 53.4
A06p06070 Brassica napus HOM05D009911 ORTHO05D009712 2.2e-34 149.4 174 52.9
CARHR009330 Cardamine hirsuta HOM05D009911 ORTHO05D009712 1.1e-33 147.1 175 49.7
BcaC05g24790 Brassica carinata HOM05D009911 ORTHO05D009712 2.7e-32 142.5 175 52.6
BolC5t29493H Brassica oleracea HOM05D009911 ORTHO05D009712 2.7e-32 142.5 175 52.6
C05p07360 Brassica napus HOM05D009911 ORTHO05D009712 4.6e-32 141.7 171 51.5
BolC5t29496H Brassica oleracea HOM05D009911 ORTHO05D009712 1.5e-30 136.7 174 51.1
C05p07390 Brassica napus HOM05D009911 ORTHO05D009712 7.3e-30 134.4 174 50.6
A06p06120 Brassica napus HOM05D009911 ORTHO05D009712 1.8e-28 129.8 174 50.6
BraA06t23825Z Brassica rapa HOM05D009911 ORTHO05D009712 1.8e-28 129.8 174 50.6
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 2.0e-27 126.3 173 43.9
BolC5t29495H Brassica oleracea HOM05D009911 ORTHO05D009712 2.4e-25 119.4 90 71.1
A09p65510 Brassica napus HOM05D009911 ORTHO05D009712 4.7e-21 105.1 89 66.3
BraA09t41896Z Brassica rapa HOM05D009911 ORTHO05D009712 4.9e-18 95.1 53 90.6
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 6.6e-07 58.2 172 27.9
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 3.3e-06 55.8 152 25.0


User provided reference genes

Program Settings