Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p49050 Brassica napus HOM05D009074 ORTHO05D011606 3.4e-107 391.7 206 100.0
BcaB08g37341 Brassica carinata HOM05D009074 ORTHO05D011606 3.9e-87 325.1 206 83.0
A09p65110 Brassica napus HOM05D009074 ORTHO05D011606 6.9e-76 287.7 201 76.6
BraA09t41854Z Brassica rapa HOM05D009074 ORTHO05D011606 6.9e-76 287.7 201 76.6
BcaC07g41834 Brassica carinata HOM05D009074 ORTHO05D011606 4.1e-60 235.3 204 64.7
BcaC07g41830 Brassica carinata HOM05D009074 ORTHO05D011606 9.4e-49 197.6 94 100.0
BolC8t52437H Brassica oleracea HOM05D009074 ORTHO05D011606 1.7e-45 186.8 153 66.0
BcaC07g41831 Brassica carinata HOM05D009074 ORTHO05D011606 2.7e-35 152.9 102 83.3
AL1G21130 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 7.3e-25 118.2 154 44.8
C06p10420 Brassica napus HOM05D009074 ORTHO05D011606 4.7e-24 115.5 128 47.7
BolC6t36119H Brassica oleracea HOM05D009074 ORTHO05D011606 4.7e-24 115.5 128 47.7
AL1G22560 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 8.0e-24 114.8 175 41.7
BcaB08g37346 Brassica carinata HOM05D009074 ORTHO05D011606 3.0e-23 112.8 86 72.1
BcaC08g43626 Brassica carinata HOM05D009074 ORTHO05D011606 1.7e-21 107.1 160 43.1
AL1G43110 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 9.2e-20 101.3 171 41.5
AL1G22570 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 1.3e-18 97.4 150 43.3
AL1G43120 Arabidopsis lyrata HOM05D009074 ORTHO05D011606 8.6e-18 94.7 164 40.9
Aa31LG9G11450 Aethionema arabicum HOM05D009074 ORTHO05D011606 1.1e-17 94.4 136 43.4
Aa31LG9G11490 Aethionema arabicum HOM05D009074 ORTHO05D011606 3.3e-17 92.8 136 42.6
BraA07t28839Z Brassica rapa HOM05D009074 ORTHO05D011606 6.8e-15 85.1 117 41.9
Carub.0002s1843 Capsella rubella HOM05D009074 ORTHO05D011606 1.3e-13 80.9 116 42.2
BcaC06g35452 Brassica carinata HOM05D009074 ORTHO05D011606 2.2e-13 80.1 64 56.2
BolC7t42086H Brassica oleracea HOM05D009074 ORTHO05D011606 2.2e-13 80.1 64 56.2
BcaC05g28233 Brassica carinata HOM05D009074 ORTHO05D032380 7.0e-12 75.1 156 31.4
A07p10370 Brassica napus HOM05D009074 ORTHO05D011606 7.0e-12 75.1 113 37.2
AT1G02370 Arabidopsis thaliana HOM05D000300 ORTHO05D000383 1.6e-11 73.9 144 35.4
BcaC05g28234 Brassica carinata HOM05D009074 ORTHO05D032380 2.7e-11 73.2 144 32.6
C05p42860 Brassica napus HOM05D001049 ORTHO05D005951 4.6e-11 72.4 124 33.1
BolC5t33016H Brassica oleracea HOM05D009074 ORTHO05D032380 4.6e-11 72.4 124 33.1
BcaC01g06786 Brassica carinata HOM05D000300 ORTHO05D000383 6.0e-11 72.0 173 32.9
BolC3t16105H Brassica oleracea HOM05D000300 ORTHO05D000383 6.0e-11 72.0 142 34.5
Thhalv10007036m.g Eutrema salsugineum HOM05D000300 ORTHO05D000383 7.8e-11 71.6 150 34.0
C03p38240 Brassica napus HOM05D000300 ORTHO05D000383 2.3e-10 70.1 179 30.2
C08p48960 Brassica napus HOM05D009074 ORTHO05D011606 2.3e-10 70.1 70 61.4
A03p31320 Brassica napus HOM05D000300 ORTHO05D000383 3.9e-10 69.3 138 31.9
BraA03t12314Z Brassica rapa HOM05D000300 ORTHO05D000383 3.9e-10 69.3 138 31.9
AL1G11720 Arabidopsis lyrata HOM05D000300 ORTHO05D000383 6.6e-10 68.6 153 40.5
BcaB01g02403 Brassica carinata HOM05D000300 ORTHO05D000383 6.6e-10 68.6 138 32.6
Carub.0006s3524 Capsella rubella HOM05D000300 ORTHO05D000383 6.6e-10 68.6 174 31.6
C07p15930 Brassica napus HOM05D009074 ORTHO05D011606 1.5e-09 67.4 72 47.2
AL1G24010 Arabidopsis lyrata HOM05D009074 ORTHO05D023607 1.9e-09 67.0 87 41.4
AL1G24050 Arabidopsis lyrata HOM05D009074 ORTHO05D023607 1.9e-09 67.0 87 41.4
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 1.9e-09 67.0 115 36.5
AL6G51260 Arabidopsis lyrata HOM05D000300 ORTHO05D000383 2.5e-09 66.6 131 34.4
Thhalv10029427m.g Eutrema salsugineum HOM05D000300 ORTHO05D000383 2.5e-09 66.6 180 30.0
AL1G24720 Arabidopsis lyrata HOM05D009074 ORTHO05D023607 3.3e-09 66.2 115 36.5
Sp1g01450 Schrenkiella parvula HOM05D000300 ORTHO05D000383 3.3e-09 66.2 193 31.6
AT4G01990 Arabidopsis thaliana HOM05D000300 ORTHO05D000383 4.3e-09 65.9 171 31.0
Aa31LG1G10000 Aethionema arabicum HOM05D000300 ORTHO05D000383 5.6e-09 65.5 148 32.4
Carub.0001s0142 Capsella rubella HOM05D000300 ORTHO05D000383 5.6e-09 65.5 102 40.2
AT1G11470 Arabidopsis thaliana HOM05D009074 ORTHO05D011606 7.3e-09 65.1 68 44.1
BcaB03g14736 Brassica carinata HOM05D009074 ORTHO05D011606 1.2e-08 64.3 148 37.2
C05p01170 Brassica napus HOM05D000300 ORTHO05D000383 1.2e-08 64.3 145 31.0
CARHR249690 Cardamine hirsuta HOM05D000300 ORTHO05D000383 1.2e-08 64.3 170 29.4
Aa31LG1G9990 Aethionema arabicum HOM05D000300 ORTHO05D000383 1.6e-08 63.9 197 29.9
A10p01140 Brassica napus HOM05D000300 ORTHO05D000383 4.7e-08 62.4 145 30.3
CARHR001690 Cardamine hirsuta HOM05D000300 ORTHO05D000383 4.7e-08 62.4 148 31.8
BcaB03g15787 Brassica carinata HOM05D000300 ORTHO05D000383 6.2e-08 62.0 151 31.1
BcaC05g24618 Brassica carinata HOM05D000300 ORTHO05D000383 6.2e-08 62.0 145 30.3
BolC5t28899H Brassica oleracea HOM05D000300 ORTHO05D000383 6.2e-08 62.0 145 30.3
BraA10t42393Z Brassica rapa HOM05D000300 ORTHO05D000383 2.3e-07 60.1 145 32.4
Aa31LG5G1620 Aethionema arabicum HOM05D000300 ORTHO05D000383 5.2e-07 58.9 196 28.1
BcaB03g16674 Brassica carinata HOM05D009074 ORTHO05D000383 2.6e-06 56.6 178 30.3
Lalb_Chr06g0166941 Lupinus albus HOM05D000300 ORTHO05D000383 2.6e-06 56.6 119 30.3
BcaC06g36477 Brassica carinata HOM05D000300 ORTHO05D011606 4.4e-06 55.8 120 33.3
BraA06t23236Z Brassica rapa HOM05D001738 ORTHO05D001644 7.5e-06 55.1 122 36.1
Sp6g01870 Schrenkiella parvula HOM05D000300 ORTHO05D000383 7.5e-06 55.1 134 29.9


User provided reference genes

Program Settings