Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p49000 Brassica napus HOM05D006735 ORTHO05D009558 1.6e-115 419.5 220 100.0
A10p02300 Brassica napus HOM05D006735 ORTHO05D009558 5.2e-106 387.9 227 87.7
C06p06100 Brassica napus HOM05D006735 ORTHO05D009558 7.6e-105 384.0 227 87.2
C03p71260 Brassica napus HOM05D006735 ORTHO05D009558 1.1e-82 310.5 186 88.2
C06p04290 Brassica napus HOM05D006735 ORTHO05D009558 3.1e-82 308.9 186 87.6
C02p38090 Brassica napus HOM05D006735 ORTHO05D009558 4.0e-82 308.5 186 87.6
C01p27580 Brassica napus HOM05D006735 ORTHO05D009558 1.0e-80 303.9 186 86.6
C09p53130 Brassica napus HOM05D006735 ORTHO05D009558 6.1e-70 268.1 195 70.8
A07p02010 Brassica napus HOM05D006735 ORTHO05D009558 9.0e-66 254.2 187 70.6
C03p60980 Brassica napus HOM05D006735 ORTHO05D009558 2.0e-65 253.1 202 68.3
BolC9t58189H Brassica oleracea HOM05D006735 ORTHO05D009558 1.8e-61 240.0 180 68.9
C03p72010 Brassica napus HOM05D006735 ORTHO05D009558 2.2e-59 233.0 151 82.8
C03p17760 Brassica napus HOM05D006735 ORTHO05D009558 5.3e-58 228.4 181 70.7
BcaC09g51566 Brassica carinata HOM05D006735 ORTHO05D009558 1.7e-51 206.8 211 61.6
BcaC09g51945 Brassica carinata HOM05D006735 ORTHO05D009558 4.8e-51 205.3 204 60.8
C04p61000 Brassica napus HOM05D006735 ORTHO05D009558 4.8e-51 205.3 202 57.4
BcaC08g45821 Brassica carinata HOM05D006735 ORTHO05D009558 6.3e-51 204.9 204 55.9
BcaC03g15864 Brassica carinata HOM05D006735 ORTHO05D009558 8.2e-51 204.5 204 55.9
BcaC04g20691 Brassica carinata HOM05D006735 ORTHO05D009558 8.2e-51 204.5 202 57.4
C09p40570 Brassica napus HOM05D006735 ORTHO05D009558 8.2e-51 204.5 202 57.4
A09p42550 Brassica napus HOM05D006735 ORTHO05D009558 2.4e-50 203.0 197 56.3
C03p85420 Brassica napus HOM05D006735 ORTHO05D009558 3.1e-50 202.6 222 55.9
A01p26730 Brassica napus HOM05D006735 ORTHO05D009558 2.2e-48 196.4 206 57.3
BcaC07g38146 Brassica carinata HOM05D006735 ORTHO05D009558 1.1e-47 194.1 214 56.5
C04p69030 Brassica napus HOM05D006735 ORTHO05D009558 3.2e-47 192.6 214 56.5
BcaC09g48693 Brassica carinata HOM05D006735 ORTHO05D009558 1.8e-42 176.8 180 60.6
C01p49010 Brassica napus HOM05D006735 ORTHO05D000586 3.2e-39 166.0 173 61.3
BcaC01g00870 Brassica carinata HOM05D006735 ORTHO05D009558 5.5e-39 165.2 203 52.7
C09p22370 Brassica napus HOM05D006735 ORTHO05D009558 1.7e-35 153.7 169 60.4
A08p25190 Brassica napus HOM05D006735 ORTHO05D009558 2.8e-35 152.9 169 58.6
BcaC08g43985 Brassica carinata HOM05D006735 ORTHO05D009558 3.7e-35 152.5 197 46.2
BcaB01g02897 Brassica carinata HOM05D006735 ORTHO05D009558 6.3e-35 151.8 197 45.2
BcaC01g03559 Brassica carinata HOM05D006735 ORTHO05D009558 1.4e-34 150.6 198 46.0
BolC3t17400H Brassica oleracea HOM05D006735 ORTHO05D009558 1.4e-34 150.6 198 46.0
BcaC03g18043 Brassica carinata HOM05D006735 ORTHO05D009558 1.7e-32 143.7 186 44.6
BcaC01g02272 Brassica carinata HOM05D006735 ORTHO05D009558 1.6e-30 137.1 193 47.2
C03p67160 Brassica napus HOM05D006735 ORTHO05D009558 3.4e-28 129.4 173 50.3
CARHR117250 Cardamine hirsuta HOM05D000477 ORTHO05D000338 1.5e-20 104.0 73 64.4
C07p37620 Brassica napus HOM05D006735 ORTHO05D010262 1.4e-13 80.9 193 31.6
AL2G40820 Arabidopsis lyrata HOM05D006735 ORTHO05D009558 1.8e-13 80.5 90 41.1
BraA06t25399Z Brassica rapa HOM05D006735 ORTHO05D009558 6.8e-13 78.6 199 35.7
C09p55340 Brassica napus HOM05D006735 ORTHO05D009558 2.0e-12 77.0 182 31.9
C02p59260 Brassica napus HOM05D006735 ORTHO05D009558 4.4e-12 75.9 55 58.2
A09p18970 Brassica napus HOM05D006735 ORTHO05D009558 5.8e-12 75.5 186 30.1
BcaC04g18966 Brassica carinata HOM05D006735 ORTHO05D009558 2.2e-11 73.6 190 32.1
AT1G80625 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 2.9e-11 73.2 90 38.9
BolC8t47857H Brassica oleracea HOM05D006735 ORTHO05D009558 3.7e-11 72.8 178 32.6
Sp5g35140 Schrenkiella parvula HOM05D006735 ORTHO05D009558 6.4e-11 72.0 109 38.5
AT3G19790 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 3.2e-10 69.7 57 50.9
BolC8t50679H Brassica oleracea HOM05D006735 ORTHO05D009558 3.2e-10 69.7 190 34.2
Carub.0003s1967 Capsella rubella HOM05D006735 ORTHO05D009558 3.2e-10 69.7 77 39.0
BolC8t49602H Brassica oleracea HOM05D006735 ORTHO05D009558 5.4e-10 68.9 193 30.6
BolC7t41471H Brassica oleracea HOM05D006735 ORTHO05D009558 1.6e-09 67.4 193 31.1
BolC3t18997H Brassica oleracea HOM05D006735 ORTHO05D009558 2.7e-09 66.6 137 34.3
CARHR286360 Cardamine hirsuta HOM05D006735 ORTHO05D009558 2.7e-09 66.6 68 50.0
C08p11240 Brassica napus HOM05D006735 ORTHO05D009558 3.5e-09 66.2 52 57.7
A05p11690 Brassica napus HOM05D006735 ORTHO05D009558 1.7e-08 63.9 39 69.2
BolC3t19829H Brassica oleracea HOM05D006735 ORTHO05D009558 8.6e-08 61.6 188 29.8
Thhalv10002194m.g Eutrema salsugineum HOM05D006735 ORTHO05D011963 8.6e-08 61.6 165 29.7
Thhalv10022056m.g Eutrema salsugineum HOM05D006735 ORTHO05D009558 1.1e-07 61.2 56 50.0
BcaC01g01277 Brassica carinata HOM05D006735 ORTHO05D009558 1.9e-07 60.5 169 33.1
AL3G33240 Arabidopsis lyrata HOM05D006735 ORTHO05D009558 2.5e-07 60.1 57 42.1
C09p40840 Brassica napus HOM05D006735 ORTHO05D009558 5.6e-07 58.9 44 56.8
C06p13880 Brassica napus HOM05D006735 ORTHO05D009558 1.2e-06 57.8 126 35.7
BcaB02g10963 Brassica carinata HOM05D006735 ORTHO05D011963 2.8e-06 56.6 105 35.2
BcaB04g18785 Brassica carinata HOM05D006735 ORTHO05D011963 2.8e-06 56.6 105 34.3
BcaC01g02992 Brassica carinata HOM05D006735 ORTHO05D009558 8.1e-06 55.1 188 28.7
BcaC08g43898 Brassica carinata HOM05D011499 ORTHO05D011963 8.1e-06 55.1 108 32.4


User provided reference genes

Program Settings