Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 1.0e-186 656.8 375 100.0
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 2.0e-166 589.3 375 92.5
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 1.1e-161 573.5 420 83.6
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 1.6e-131 473.4 410 74.1
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 2.8e-131 472.6 411 75.2
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 1.2e-121 440.7 446 66.8
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 2.9e-112 409.5 380 69.7
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 5.8e-105 385.2 394 67.3
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 6.6e-101 371.7 414 54.8
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 2.4e-98 363.2 410 53.4
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 3.8e-96 355.9 411 53.0
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 1.1e-90 337.8 397 52.6
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 1.5e-68 264.2 378 43.9
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 4.2e-63 246.1 364 44.5
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 1.0e-45 188.3 355 35.8
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 1.1e-44 184.9 379 35.4
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 3.3e-44 183.3 335 35.2
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 1.1e-42 178.3 356 34.8
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 1.8e-42 177.6 364 35.4
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 9.4e-39 165.2 368 33.7
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 2.1e-38 164.1 376 33.5
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 2.1e-38 164.1 374 34.2
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 4.7e-38 162.9 356 34.0
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 8.0e-38 162.2 375 32.3
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 5.2e-37 159.5 377 39.5
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 6.8e-37 159.1 382 32.5
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 8.8e-37 158.7 379 34.3
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 1.2e-36 158.3 378 35.4
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 2.6e-36 157.1 357 33.3
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 5.7e-36 156.0 381 33.1
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 7.5e-36 155.6 375 31.7
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 7.5e-36 155.6 380 31.8
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 2.2e-35 154.1 368 43.8
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.1e-34 151.8 370 31.4
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 1.4e-34 151.4 358 33.5
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 3.1e-34 150.2 354 30.8
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 2.7e-33 147.1 378 29.6
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 2.7e-33 147.1 359 32.9
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 2.7e-33 147.1 356 35.4
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 5.9e-33 146.0 380 31.8
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 2.9e-32 143.7 377 33.2
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 8.5e-32 142.1 358 33.5
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 1.9e-31 141.0 402 29.4
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 4.2e-31 139.8 357 35.9
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 9.4e-31 138.7 383 31.3
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 2.1e-30 137.5 372 30.6
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 8.0e-30 135.6 307 32.6
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 1.0e-29 135.2 383 30.0
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 1.8e-29 134.4 384 30.7
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.8e-29 134.4 386 34.7
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 2.3e-29 134.0 385 29.6
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 4.4e-28 129.8 368 30.7
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 1.3e-27 128.3 375 30.4
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 3.1e-26 123.6 371 29.1
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 1.6e-25 121.3 373 29.2
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 7.7e-25 119.0 350 34.6
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 7.7e-25 119.0 350 34.6
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 1.0e-24 118.6 333 31.2
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 1.7e-24 117.9 383 29.0
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 2.3e-24 117.5 386 30.1
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 2.3e-24 117.5 362 30.4
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 6.6e-24 115.9 380 27.6
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 6.6e-24 115.9 365 28.8
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 1.5e-23 114.8 334 29.9
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 1.9e-23 114.4 365 26.8
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 2.5e-23 114.0 364 28.3
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 3.3e-23 113.6 361 26.9
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 4.2e-23 113.2 382 28.0
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 9.5e-23 112.1 175 39.4
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 1.0e-21 108.6 373 27.3
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 1.4e-21 108.2 348 29.0
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 2.0e-20 104.4 383 29.0
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 2.0e-20 104.4 359 27.3
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 3.4e-20 103.6 367 29.2
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 7.5e-20 102.4 350 27.7
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 1.7e-19 101.3 121 46.3
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 2.2e-19 100.9 188 37.2
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 2.9e-19 100.5 185 33.0
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.9e-19 100.5 186 36.0
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 8.3e-19 99.0 360 27.5
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 5.4e-18 96.3 372 27.4
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 7.0e-18 95.9 369 28.2
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 2.7e-17 94.0 171 33.3
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 3.5e-17 93.6 137 38.0
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 7.8e-17 92.4 161 38.5
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 1.9e-15 87.8 190 32.6
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 9.5e-15 85.5 269 31.6
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 9.5e-15 85.5 214 29.0
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 9.5e-15 85.5 354 24.9
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 2.8e-14 84.0 109 42.2
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 5.2e-13 79.7 284 26.8
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 3.4e-12 77.0 135 40.0
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 4.4e-12 76.6 441 26.1
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 4.4e-12 76.6 154 35.1
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 1.7e-11 74.7 226 30.1
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.7e-11 74.7 258 29.8
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 6.4e-11 72.8 384 31.5
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 4.1e-10 70.1 106 37.7
SEGI_25539 Sequoiadendron giganteum HOM05D006585 ORTHO05D007798 1.6e-09 68.2 202 29.7
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 2.0e-09 67.8 121 37.2
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 6.0e-09 66.2 260 28.1
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 1.7e-08 64.7 214 27.6
TPR.G34666 Trifolium pratense HOM05D006585 ORTHO05D007798 1.7e-08 64.7 63 52.4
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 3.0e-08 63.9 64 48.4
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 1.9e-07 61.2 172 30.2


User provided reference genes

Program Settings