Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p48340 Brassica napus HOM05D004441 ORTHO05D003109 2.4e-131 472.2 249 100.0
BolC8t52373H Brassica oleracea HOM05D004441 ORTHO05D003109 2.4e-131 472.2 249 100.0
BcaC07g41791 Brassica carinata HOM05D004441 ORTHO05D003109 1.7e-113 412.9 250 90.4
BraA09t41810Z Brassica rapa HOM05D004441 ORTHO05D003109 6.5e-113 411.0 253 89.3
A09p64850 Brassica napus HOM05D004441 ORTHO05D003109 1.4e-110 403.3 253 88.5
Sp1g09810 Schrenkiella parvula HOM05D004441 ORTHO05D003109 4.3e-80 302.0 272 69.1
BraA06t23983Z Brassica rapa HOM05D004441 ORTHO05D003109 1.6e-71 273.5 283 60.8
Thhalv10008484m.g Eutrema salsugineum HOM05D004441 ORTHO05D003109 2.0e-69 266.5 274 62.0
A06p07830 Brassica napus HOM05D004441 ORTHO05D003109 3.4e-69 265.8 283 59.7
BolC5t29682H Brassica oleracea HOM05D004441 ORTHO05D003109 3.4e-53 212.6 282 54.6
C05p09410 Brassica napus HOM05D004441 ORTHO05D003109 5.8e-53 211.8 282 54.3
AT1G11125 Arabidopsis thaliana HOM05D004441 ORTHO05D003109 1.1e-51 207.6 274 56.2
AL1G22120 Arabidopsis lyrata HOM05D004441 ORTHO05D003109 1.9e-51 206.8 274 55.5
CARHR011330 Cardamine hirsuta HOM05D004441 ORTHO05D003109 3.3e-48 196.1 267 53.6
Carub.0001s1070 Capsella rubella HOM05D004441 ORTHO05D003109 1.2e-45 187.6 275 52.7
Sp2g03290 Schrenkiella parvula HOM05D004441 ORTHO05D003109 1.0e-33 147.9 272 44.9
Aa31LG1G3780 Aethionema arabicum HOM05D004441 ORTHO05D003109 5.1e-33 145.6 282 43.3
BcaC09g49327 Brassica carinata HOM05D004441 ORTHO05D003109 9.7e-32 141.4 268 41.8
C01p37890 Brassica napus HOM05D004441 ORTHO05D003109 9.7e-32 141.4 268 41.8
BolC1t03749H Brassica oleracea HOM05D004441 ORTHO05D003109 9.7e-32 141.4 268 41.8
BraA01t03127Z Brassica rapa HOM05D004441 ORTHO05D003109 1.3e-31 141.0 268 41.8
AT1G61170 Arabidopsis thaliana HOM05D004441 ORTHO05D003109 1.7e-31 140.6 277 41.9
AL2G15180 Arabidopsis lyrata HOM05D004441 ORTHO05D003109 2.4e-30 136.7 277 40.8
A01p29970 Brassica napus HOM05D004441 ORTHO05D003109 3.1e-30 136.3 268 40.7
A03p66730 Brassica napus HOM05D004441 ORTHO05D003109 5.3e-30 135.6 273 42.1
BraA01t02809Z Brassica rapa HOM05D004441 ORTHO05D003109 5.3e-30 135.6 273 42.1
BcaB04g20321 Brassica carinata HOM05D004441 ORTHO05D003109 1.5e-29 134.0 268 41.8
BcaC06g31839 Brassica carinata HOM05D004441 ORTHO05D003109 6.5e-28 128.6 247 41.7
Thhalv10023654m.g Eutrema salsugineum HOM05D004441 ORTHO05D003109 1.4e-27 127.5 270 42.2
Aa31LG2G9430 Aethionema arabicum HOM05D004441 ORTHO05D003109 3.2e-27 126.3 249 43.0
Carub.0002s0400 Capsella rubella HOM05D004441 ORTHO05D003109 7.2e-27 125.2 275 40.0
CARHR051480 Cardamine hirsuta HOM05D004441 ORTHO05D003109 1.2e-26 124.4 274 42.0
BcaC02g10584 Brassica carinata HOM05D004441 ORTHO05D003109 3.6e-26 122.9 271 39.5
C04p27200 Brassica napus HOM05D004441 ORTHO05D003109 3.6e-26 122.9 271 39.5
BolC4t24251H Brassica oleracea HOM05D004441 ORTHO05D003109 3.6e-26 122.9 271 39.5
THA.LOC104809557 Tarenaya hassleriana HOM05D004441 ORTHO05D003109 1.4e-22 110.9 301 38.9
Gohir.D06G129200 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.1e-14 84.7 285 35.1
Duzib192G0975 Durio zibethinus HOM05D004441 ORTHO05D003109 1.4e-14 84.3 310 32.9
Gorai.010G150800 Gossypium raimondii HOM05D004441 ORTHO05D003109 2.4e-14 83.6 285 35.1
Gohir.A06G124300 Gossypium hirsutum HOM05D004441 ORTHO05D003109 4.1e-14 82.8 285 35.1
Gorai.009G171500 Gossypium raimondii HOM05D004441 ORTHO05D003109 2.6e-13 80.1 302 31.5
Thecc.06G194800 Theobroma cacao HOM05D004441 ORTHO05D003109 2.2e-12 77.0 299 32.4
Gohir.D05G166400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 6.5e-12 75.5 303 31.4
TWI63G0258 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 6.5e-12 75.5 296 31.4
COL.COLO4_31538 Corchorus olitorius HOM05D004441 ORTHO05D003109 5.5e-11 72.4 314 31.2
Duzib160G0195 Durio zibethinus HOM05D004441 ORTHO05D003109 9.4e-11 71.6 309 31.7
Gohir.A05G163400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.6e-10 70.9 306 30.7
Potri.011G045700 Populus trichocarpa HOM05D004441 ORTHO05D003109 1.4e-09 67.8 329 30.7
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 6.7e-09 65.5 284 33.5
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 6.7e-09 65.5 284 33.5
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 2.0e-08 63.9 290 32.8
Nitab4.5_0001820g0050 Nicotiana tabacum HOM05D004441 ORTHO05D003109 2.6e-08 63.5 279 29.4
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 3.3e-08 63.2 283 29.7
Sabra11G0031800 Salix brachista HOM05D004441 ORTHO05D003109 9.7e-08 61.6 330 28.8
Nitab4.5_0007319g0010 Nicotiana tabacum HOM05D004441 ORTHO05D003109 1.7e-07 60.8 281 29.2
Manes.17G041200 Manihot esculenta HOM05D004441 ORTHO05D003109 2.8e-07 60.1 319 31.3
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 3.7e-07 59.7 294 29.9
PGR004G2153 Punica granatum HOM05D004441 ORTHO05D003109 4.8e-07 59.3 203 34.0
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 8.2e-07 58.5 285 28.1
Prupe.4G040000 Prunus persica HOM05D004441 ORTHO05D003109 8.2e-07 58.5 323 27.2
SalBow8G3623 Salvia bowleyana HOM05D004441 ORTHO05D003109 8.2e-07 58.5 289 31.5
SalBow8G4382 Salvia bowleyana HOM05D004441 ORTHO05D003109 8.2e-07 58.5 289 31.5
Glyma.15G069600 Glycine max HOM05D004441 ORTHO05D003109 1.1e-06 58.2 296 30.1
arahy.Tifrunner.gnm1.ann1.KXRU9A Arachis hypogaea HOM05D004441 ORTHO05D003109 1.8e-06 57.4 292 31.8
Thhalv10024164m.g Eutrema salsugineum HOM05D004441 ORTHO05D003109 2.4e-06 57.0 119 37.0
Lalb_Chr15g0089961 Lupinus albus HOM05D004441 ORTHO05D003109 2.4e-06 57.0 289 29.1
Psat1g207120 Pisum sativum HOM05D004441 ORTHO05D003109 2.4e-06 57.0 295 28.5
Medtr2g012750 Medicago truncatula HOM05D004441 ORTHO05D003109 3.1e-06 56.6 293 29.4
TWI38G0459 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 3.1e-06 56.6 192 34.4
Sabra04G0022600 Salix brachista HOM05D004441 ORTHO05D003109 5.3e-06 55.8 212 32.1
Ca_00297_v3 Cicer arietinum L. HOM05D004441 ORTHO05D003109 7.0e-06 55.5 285 30.9
Potri.004G037100 Populus trichocarpa HOM05D004441 ORTHO05D003109 9.1e-06 55.1 243 31.7


User provided reference genes

Program Settings