Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p48150 Brassica napus HOM05D008530 ORTHO05D027544 1.5e-184 649.4 336 100.0
BcaC07g41774 Brassica carinata HOM05D008530 ORTHO05D027544 1.5e-75 287.3 164 88.4
BcaB08g37402 Brassica carinata HOM05D008530 ORTHO05D027544 9.3e-62 241.5 218 61.0
BolC8t52348H Brassica oleracea HOM05D008530 ORTHO05D027544 2.4e-49 200.3 113 90.3
BraA09t41789Z Brassica rapa HOM05D008530 ORTHO05D011436 1.1e-41 174.9 275 48.4
BolC8t52334H Brassica oleracea HOM05D008530 ORTHO05D011436 2.4e-41 173.7 277 47.7
C08p46990 Brassica napus HOM05D008530 ORTHO05D011436 1.7e-39 167.5 269 48.0
BcaB08g37411 Brassica carinata HOM05D008530 ORTHO05D011436 3.8e-39 166.4 221 49.3
BcaC07g41758 Brassica carinata HOM05D004937 ORTHO05D006414 5.0e-39 166.0 271 46.5
C08p47970 Brassica napus HOM05D006443 ORTHO05D007797 1.6e-37 161.0 227 48.0
BolC8t52236H Brassica oleracea HOM05D008530 ORTHO05D011436 2.7e-37 160.2 223 48.4
BraA09t41777Z Brassica rapa HOM05D008530 ORTHO05D011436 1.5e-35 154.5 286 45.5
BcaB08g37401 Brassica carinata HOM05D008530 ORTHO05D011436 2.4e-33 147.1 94 81.9
C07p01980 Brassica napus HOM05D008530 ORTHO05D040054 4.2e-22 109.8 271 37.3
BraA01t00697Z Brassica rapa HOM05D008530 ORTHO05D020138 2.1e-21 107.5 204 43.1
A03p05230 Brassica napus HOM05D008530 ORTHO05D020138 1.5e-19 101.3 182 42.9
BolC1t00892H Brassica oleracea HOM05D008530 ORTHO05D020138 3.3e-19 100.1 220 39.5
C01p09020 Brassica napus HOM05D008530 ORTHO05D020138 9.7e-19 98.6 195 40.0
BcaC09g51786 Brassica carinata HOM05D002665 ORTHO05D020138 2.2e-18 97.4 179 40.8
A05p36570 Brassica napus HOM05D008530 ORTHO05D020138 2.2e-18 97.4 223 39.0
BcaB06g25599 Brassica carinata HOM05D008530 ORTHO05D011436 7.0e-17 92.4 226 34.1
BcaB08g34293 Brassica carinata HOM05D008530 ORTHO05D014035 2.0e-16 90.9 177 40.1
BolC8t52199H Brassica oleracea HOM05D008530 ORTHO05D011436 2.0e-16 90.9 202 36.1
A09p63010 Brassica napus HOM05D008530 ORTHO05D011436 4.5e-16 89.7 99 51.5
A09p63050 Brassica napus HOM05D008530 ORTHO05D011436 4.5e-16 89.7 99 51.5
BraA09t41658Z Brassica rapa HOM05D008530 ORTHO05D011436 4.5e-16 89.7 99 51.5
A01p07520 Brassica napus HOM05D008530 ORTHO05D020138 5.9e-16 89.4 250 35.6
BcaB06g28774 Brassica carinata HOM05D008530 ORTHO05D007797 1.0e-15 88.6 75 66.7
A09p63000 Brassica napus HOM05D008530 ORTHO05D011436 1.0e-15 88.6 197 39.1
BraA09t41662Z Brassica rapa HOM05D008530 ORTHO05D011436 5.5e-14 82.8 92 54.3
BolC8t52195H Brassica oleracea HOM05D008530 ORTHO05D032716 1.6e-13 81.3 88 55.7
BcaC07g41644 Brassica carinata HOM05D008530 ORTHO05D011436 2.7e-13 80.5 198 34.8
BolC8t52203H Brassica oleracea HOM05D008530 ORTHO05D011436 1.8e-12 77.8 92 52.2
BraA09t41666Z Brassica rapa HOM05D008530 ORTHO05D011436 3.0e-12 77.0 214 33.6
A09p63120 Brassica napus HOM05D008530 ORTHO05D011436 3.9e-12 76.6 214 33.6
BcaC07g41650 Brassica carinata HOM05D008530 ORTHO05D011436 2.0e-11 74.3 87 55.2
C08p46510 Brassica napus HOM05D008530 ORTHO05D011436 2.0e-11 74.3 87 55.2
BcaC07g41646 Brassica carinata HOM05D008530 ORTHO05D011436 7.4e-11 72.4 88 53.4
C08p46470 Brassica napus HOM05D008530 ORTHO05D011436 7.4e-11 72.4 88 53.4
BolC8t52194H Brassica oleracea HOM05D008530 ORTHO05D011436 7.4e-11 72.4 89 52.8
BcaB08g34294 Brassica carinata HOM05D008530 ORTHO05D011436 1.3e-10 71.6 178 31.5
C08p46590 Brassica napus HOM05D008530 ORTHO05D011436 5.3e-09 66.2 89 48.3
C08p45840 Brassica napus HOM05D008530 ORTHO05D011436 1.6e-08 64.7 143 36.4
BcaC07g41583 Brassica carinata HOM05D008530 ORTHO05D011436 4.5e-08 63.2 157 35.0
COL.COLO4_34426 Corchorus olitorius HOM05D005566 ORTHO05D007534 4.5e-08 63.2 186 28.5
Rhsim02G0223600 Rhododendron simsii HOM05D005566 ORTHO05D007534 6.5e-07 59.3 154 26.6
Gohir.A12G226600 Gossypium hirsutum HOM05D005566 ORTHO05D007534 8.5e-07 58.9 156 26.9
Gohir.D12G229000 Gossypium hirsutum HOM05D005566 ORTHO05D007534 8.5e-07 58.9 156 26.9
Thhalv10014517m.g Eutrema salsugineum HOM05D005207 ORTHO05D011436 1.1e-06 58.5 98 42.9
Duzib084G0536 Durio zibethinus HOM05D005566 ORTHO05D007534 1.5e-06 58.2 156 27.6
Gorai.008G245200 Gossypium raimondii HOM05D005566 ORTHO05D007534 1.9e-06 57.8 156 26.3
Hma1.2p1_1943F.1_g308460 Hydrangea macrophylla HOM05D005566 ORTHO05D007534 1.9e-06 57.8 156 26.9
Manes.02G024200 Manihot esculenta HOM05D005566 ORTHO05D007534 2.5e-06 57.4 156 26.3
Atru.chr9.204 Acer truncatum HOM05D005566 ORTHO05D007534 9.4e-06 55.5 156 25.6
FAN08G2943 Fragaria x ananassa HOM05D005566 ORTHO05D007534 9.4e-06 55.5 150 24.0
Potri.003G124200 Populus trichocarpa HOM05D005566 ORTHO05D007534 9.4e-06 55.5 152 25.7


User provided reference genes

Program Settings