Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p47400 Brassica napus HOM05D000162 ORTHO05D003288 9.5e-33 142.9 71 100.0
BraA09t41588Z Brassica rapa HOM05D003784 ORTHO05D004345 9.5e-25 116.3 71 85.9
BcaC04g19405 Brassica carinata HOM05D000162 ORTHO05D003288 1.8e-23 112.1 71 78.9
C09p56060 Brassica napus HOM05D000162 ORTHO05D003288 1.8e-23 112.1 71 78.9
A09p64860 Brassica napus HOM05D000162 ORTHO05D003288 3.1e-23 111.3 70 77.1
C01p39860 Brassica napus HOM05D000162 ORTHO05D003288 3.1e-23 111.3 70 77.1
BolC9t58473H Brassica oleracea HOM05D000162 ORTHO05D003288 3.1e-23 111.3 71 78.9
A09p64060 Brassica napus HOM05D001827 ORTHO05D001790 8.9e-23 109.8 71 78.9
BraA09t41752Z Brassica rapa HOM05D001827 ORTHO05D001790 2.0e-22 108.6 71 77.5
AL1G23620 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 9.8e-22 106.3 71 78.9
C09p41050 Brassica napus HOM05D000162 ORTHO05D003288 1.3e-21 105.9 71 77.5
BcaC04g20649 Brassica carinata HOM05D000162 ORTHO05D003288 2.2e-21 105.1 71 76.1
BolC9t56985H Brassica oleracea HOM05D000162 ORTHO05D003288 2.2e-21 105.1 71 76.1
A10p09540 Brassica napus HOM05D000162 ORTHO05D000090 2.9e-21 104.8 71 77.5
BraA10t43029Z Brassica rapa HOM05D000162 ORTHO05D000090 2.9e-21 104.8 71 77.5
BolC5t33057H Brassica oleracea HOM05D000162 ORTHO05D003288 1.1e-20 102.8 69 75.4
C08p46920 Brassica napus HOM05D004112 ORTHO05D004739 1.2e-19 99.4 69 72.5
BolC8t52230H Brassica oleracea HOM05D000162 ORTHO05D003288 1.2e-19 99.4 69 72.5
BolC1t04080H Brassica oleracea HOM05D000162 ORTHO05D003288 4.6e-19 97.4 67 76.1
C05p38870 Brassica napus HOM05D000162 ORTHO05D003288 3.9e-18 94.4 71 70.4
BolC8t49183H Brassica oleracea HOM05D000162 ORTHO05D000090 6.6e-18 93.6 70 67.1
Carub.0001s1249 Capsella rubella HOM05D000162 ORTHO05D000090 1.1e-17 92.8 71 70.4
BolC1t03937H Brassica oleracea HOM05D000162 ORTHO05D003288 5.6e-17 90.5 56 78.6
C08p15550 Brassica napus HOM05D000162 ORTHO05D000090 1.2e-16 89.4 70 65.7
AL2G12790 Arabidopsis lyrata HOM05D000162 ORTHO05D003288 3.6e-16 87.8 71 64.8
CARHR055290 Cardamine hirsuta HOM05D000162 ORTHO05D003288 3.6e-16 87.8 70 64.3
Carub.0002s0787 Capsella rubella HOM05D000162 ORTHO05D003288 8.1e-16 86.7 71 66.2
BraA09t41809Z Brassica rapa HOM05D000162 ORTHO05D003288 4.0e-15 84.3 54 75.9
A09p13890 Brassica napus HOM05D000162 ORTHO05D003288 1.2e-14 82.8 71 63.4
CARHR048090 Cardamine hirsuta HOM05D000162 ORTHO05D003288 1.5e-14 82.4 69 60.9
C08p15620 Brassica napus HOM05D000032 ORTHO05D007907 2.0e-14 82.0 63 66.7
CARHR048540 Cardamine hirsuta HOM05D000162 ORTHO05D003288 2.0e-14 82.0 71 60.6
AT1G63150 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 3.4e-14 81.3 71 62.0
BcaC05g28279 Brassica carinata HOM05D000162 ORTHO05D003288 3.4e-14 81.3 59 67.8
C05p43270 Brassica napus HOM05D000162 ORTHO05D003288 3.4e-14 81.3 59 67.8
AL1G24380 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 7.5e-14 80.1 70 62.9
BcaB08g34255 Brassica carinata HOM05D000162 ORTHO05D003288 7.5e-14 80.1 55 74.5
BolC9t54565H Brassica oleracea HOM05D000162 ORTHO05D003288 9.9e-14 79.7 71 62.0
Thhalv10015983m.g Eutrema salsugineum HOM05D000162 ORTHO05D003288 1.3e-13 79.3 71 60.6
Carub.0001s1230 Capsella rubella HOM05D000162 ORTHO05D000090 8.3e-13 76.6 48 79.2
BolC3t21476H Brassica oleracea HOM05D000162 ORTHO05D003288 1.4e-12 75.9 69 56.5
BcaB08g34329 Brassica carinata HOM05D000162 ORTHO05D000090 1.9e-12 75.5 51 74.5
C04p29110 Brassica napus HOM05D000162 ORTHO05D003288 1.9e-12 75.5 69 56.5
A09p13590 Brassica napus HOM05D000162 ORTHO05D003288 5.4e-12 73.9 64 60.9
BraA08t35189Z Brassica rapa HOM05D000032 ORTHO05D007907 7.1e-12 73.6 55 69.1
BcaB03g13176 Brassica carinata HOM05D000162 ORTHO05D000090 1.2e-11 72.8 54 70.4
C08p15560 Brassica napus HOM05D000162 ORTHO05D000090 1.2e-11 72.8 56 69.6
BolC8t49184H Brassica oleracea HOM05D000162 ORTHO05D000090 1.2e-11 72.8 56 69.6
BraA08t35195Z Brassica rapa HOM05D000162 ORTHO05D000090 3.5e-11 71.2 54 68.5
BcaC07g41727 Brassica carinata HOM05D000162 ORTHO05D000090 4.6e-11 70.9 38 89.5
CARHR051050 Cardamine hirsuta HOM05D000162 ORTHO05D003288 4.6e-11 70.9 54 68.5
BcaC07g41681 Brassica carinata HOM05D000162 ORTHO05D000090 7.8e-11 70.1 52 71.2
C08p47120 Brassica napus HOM05D000162 ORTHO05D000090 7.8e-11 70.1 52 71.2
BolC8t52251H Brassica oleracea HOM05D000162 ORTHO05D000090 7.8e-11 70.1 52 71.2
BcaC07g41621 Brassica carinata HOM05D000162 ORTHO05D000090 2.3e-10 68.6 40 85.0
C08p46250 Brassica napus HOM05D000162 ORTHO05D000090 3.9e-10 67.8 41 82.9
BolC8t52174H Brassica oleracea HOM05D000162 ORTHO05D000090 3.9e-10 67.8 41 82.9
Carub.0002s0148 Capsella rubella HOM05D000162 ORTHO05D003288 5.1e-10 67.4 54 64.8
AL2G12380 Arabidopsis lyrata HOM05D000162 ORTHO05D003288 1.1e-09 66.2 54 63.0
BcaB03g11740 Brassica carinata HOM05D000162 ORTHO05D003288 1.1e-09 66.2 55 60.0
AT1G62590 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 1.5e-09 65.9 55 65.5
Carub.0002s0190 Capsella rubella HOM05D000162 ORTHO05D003288 2.5e-09 65.1 54 64.8
Thhalv10020312m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 2.5e-09 65.1 53 64.2
AT1G63330 Arabidopsis thaliana HOM05D000162 ORTHO05D003288 4.3e-09 64.3 54 64.8
Thhalv10023344m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 4.3e-09 64.3 55 60.0
AL2G18840 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 5.6e-09 63.9 55 60.0
CARHR048080 Cardamine hirsuta HOM05D000162 ORTHO05D003288 5.6e-09 63.9 55 61.8
CARHR048780 Cardamine hirsuta HOM05D000162 ORTHO05D003288 5.6e-09 63.9 54 61.1
BraA09t37036Z Brassica rapa HOM05D000162 ORTHO05D003288 7.3e-09 63.5 53 66.0
CARHR051150 Cardamine hirsuta HOM05D000162 ORTHO05D003288 7.3e-09 63.5 54 61.1
Carub.0001s1231 Capsella rubella HOM05D000162 ORTHO05D000090 9.5e-09 63.2 52 61.5
C09p16260 Brassica napus HOM05D000162 ORTHO05D003288 1.2e-08 62.8 54 64.8
BolC9t54536H Brassica oleracea HOM05D000162 ORTHO05D003288 1.2e-08 62.8 54 64.8
Thhalv10002441m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 2.8e-08 61.6 42 73.8
A09p62690 Brassica napus HOM05D000162 ORTHO05D000090 3.6e-08 61.2 33 87.9
C08p45770 Brassica napus HOM05D003784 ORTHO05D004345 3.6e-08 61.2 32 93.8
BolC8t52131H Brassica oleracea HOM05D003784 ORTHO05D004345 3.6e-08 61.2 32 93.8
FAN21G0792 Fragaria x ananassa HOM05D000027 ORTHO05D001163 6.2e-08 60.5 69 42.0
FAN21G0960 Fragaria x ananassa HOM05D000027 ORTHO05D001163 6.2e-08 60.5 69 42.0
AL3G36780 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 8.1e-08 60.1 48 64.6
BolC8t49189H Brassica oleracea HOM05D000032 ORTHO05D007907 8.1e-08 60.1 71 50.7
EL10Ac4g09814 Beta vulgaris HOM05D000162 ORTHO05D000090 1.4e-07 59.3 63 44.4
BraA09t41633Z Brassica rapa HOM05D000162 ORTHO05D003288 1.4e-07 59.3 32 87.5
Carub.0002s0192 Capsella rubella HOM05D000162 ORTHO05D003288 1.8e-07 58.9 54 61.1
CARHR046830 Cardamine hirsuta HOM05D000162 ORTHO05D003288 2.4e-07 58.5 52 57.7
CARHR048470 Cardamine hirsuta HOM05D000162 ORTHO05D003288 2.4e-07 58.5 49 61.2
Carub.0002s0209 Capsella rubella HOM05D000162 ORTHO05D003288 3.1e-07 58.2 54 59.3
AL1G24180 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 4.0e-07 57.8 34 82.4
FAN05G4416 Fragaria x ananassa HOM05D009709 ORTHO05D003288 5.2e-07 57.4 57 45.6
CARHR012890 Cardamine hirsuta HOM05D000162 ORTHO05D003288 6.8e-07 57.0 42 64.3
THA.LOC104803570 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 6.8e-07 57.0 38 71.1
BraA09t41732Z Brassica rapa HOM05D000162 ORTHO05D000090 8.9e-07 56.6 30 96.7
THA.LOC104814143 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 8.9e-07 56.6 52 53.8
BcaB08g34277 Brassica carinata HOM05D000162 ORTHO05D003288 1.2e-06 56.2 31 90.3
Thhalv10007258m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 1.2e-06 56.2 40 70.0
FvH4_3g31580 Fragaria vesca HOM05D009709 ORTHO05D003288 2.0e-06 55.5 69 37.7
FAN21G2825 Fragaria x ananassa HOM05D000162 ORTHO05D003288 2.6e-06 55.1 57 42.1
AL2G12830 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 4.4e-06 54.3 46 58.7
BcaB08g34253 Brassica carinata HOM05D000162 ORTHO05D000090 5.8e-06 53.9 33 75.8
BcaC07g41685 Brassica carinata HOM05D000162 ORTHO05D000090 5.8e-06 53.9 32 81.2
A09p63670 Brassica napus HOM05D000162 ORTHO05D000090 5.8e-06 53.9 32 81.2
C08p47160 Brassica napus HOM05D000162 ORTHO05D000090 5.8e-06 53.9 32 81.2
BolC8t52255H Brassica oleracea HOM05D000162 ORTHO05D000090 5.8e-06 53.9 32 81.2
BraA09t41715Z Brassica rapa HOM05D000162 ORTHO05D000090 5.8e-06 53.9 32 81.2
Thhalv10023354m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 5.8e-06 53.9 46 58.7
BcaC07g41684 Brassica carinata HOM05D000162 ORTHO05D000090 9.9e-06 53.1 32 78.1
C08p47150 Brassica napus HOM05D000162 ORTHO05D000090 9.9e-06 53.1 32 78.1
BolC8t52254H Brassica oleracea HOM05D000162 ORTHO05D000090 9.9e-06 53.1 32 78.1


User provided reference genes

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