Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p47190 Brassica napus HOM05D007482 ORTHO05D003038 1.4e-69 266.2 133 100.0
BraA05t21798Z Brassica rapa HOM05D007482 ORTHO05D003038 5.0e-51 204.5 125 80.0
A05p29150 Brassica napus HOM05D007482 ORTHO05D003038 1.4e-50 203.0 125 79.2
C05p44560 Brassica napus HOM05D007482 ORTHO05D003038 3.2e-50 201.8 125 78.4
BolC5t33183H Brassica oleracea HOM05D007482 ORTHO05D003038 6.1e-49 197.6 125 76.8
BcaC05g28380 Brassica carinata HOM05D007482 ORTHO05D003038 2.0e-47 192.6 117 79.5
C05p30070 Brassica napus HOM05D007482 ORTHO05D003038 1.3e-46 189.9 125 77.6
BcaB07g32750 Brassica carinata HOM05D007482 ORTHO05D003038 4.1e-45 184.9 117 79.5
BcaB08g34258 Brassica carinata HOM05D007482 ORTHO05D003038 2.9e-43 178.7 126 66.7
A09p35320 Brassica napus HOM05D007482 ORTHO05D003038 2.9e-43 178.7 125 73.6
A09p63700 Brassica napus HOM05D007482 ORTHO05D003038 5.0e-43 177.9 126 66.7
BraA09t41718Z Brassica rapa HOM05D007482 ORTHO05D003038 8.5e-43 177.2 126 65.9
C08p47200 Brassica napus HOM05D007482 ORTHO05D003038 1.1e-42 176.8 126 66.7
BraA09t39062Z Brassica rapa HOM05D007482 ORTHO05D003038 4.2e-42 174.9 120 74.2
BcaB08g34257 Brassica carinata HOM05D007482 ORTHO05D003038 1.0e-40 170.2 115 67.8
Sp1g11270 Schrenkiella parvula HOM05D007482 ORTHO05D003038 1.0e-40 170.2 125 64.8
BolC5t31743H Brassica oleracea HOM05D007482 ORTHO05D003038 3.3e-39 165.2 102 77.5
C05p30030 Brassica napus HOM05D007482 ORTHO05D003038 1.3e-38 163.3 124 62.9
BolC5t31740H Brassica oleracea HOM05D007482 ORTHO05D003038 1.3e-38 163.3 124 62.9
A09p35330 Brassica napus HOM05D007482 ORTHO05D003038 3.7e-38 161.8 126 64.3
BraA09t39063Z Brassica rapa HOM05D007482 ORTHO05D003038 5.3e-37 157.9 126 63.5
BolC8t52259H Brassica oleracea HOM05D007482 ORTHO05D003038 2.2e-35 152.5 106 67.0
C05p44570 Brassica napus HOM05D007482 ORTHO05D003038 3.6e-33 145.2 127 64.6
BolC5t33184H Brassica oleracea HOM05D007482 ORTHO05D003038 3.6e-33 145.2 127 64.6
A05p29160 Brassica napus HOM05D007482 ORTHO05D003038 8.0e-33 144.1 107 67.3
AL1G24160 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 5.2e-32 141.4 131 55.0
BraA05t21800Z Brassica rapa HOM05D007482 ORTHO05D003038 2.0e-31 139.4 107 66.4
Thhalv10023017m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 1.4e-29 133.3 124 53.2
C08p47180 Brassica napus HOM05D007482 ORTHO05D003038 2.4e-29 132.5 126 57.1
AT1G12663 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 7.0e-29 131.0 124 51.6
Thhalv10009133m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 9.1e-29 130.6 123 53.7
AL1G24130 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 4.5e-28 128.3 115 52.2
Carub.0004s0495 Capsella rubella HOM05D007482 ORTHO05D003038 4.2e-26 121.7 134 47.8
BraA09t41717Z Brassica rapa HOM05D007482 ORTHO05D003038 4.0e-24 115.2 67 77.6
CARHR012960 Cardamine hirsuta HOM05D007482 ORTHO05D003038 2.0e-23 112.8 126 46.0
Carub.0001s1238 Capsella rubella HOM05D007482 ORTHO05D003038 2.6e-23 112.5 131 46.6
CARHR012950 Cardamine hirsuta HOM05D007482 ORTHO05D003038 9.8e-23 110.5 128 42.2
Sp1g11260 Schrenkiella parvula HOM05D007482 ORTHO05D003038 9.8e-23 110.5 117 49.6
Thhalv10009942m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 1.7e-22 109.8 103 51.5
CARHR035990 Cardamine hirsuta HOM05D007482 ORTHO05D003038 2.2e-22 109.4 127 45.7
Carub.0001s1239 Capsella rubella HOM05D007482 ORTHO05D003038 2.8e-22 109.0 126 40.5
CARHR012980 Cardamine hirsuta HOM05D007482 ORTHO05D003038 2.0e-20 102.8 125 44.0
C08p47210 Brassica napus HOM05D007482 ORTHO05D003038 2.7e-20 102.4 118 44.1
C05p10610 Brassica napus HOM05D007482 ORTHO05D003038 4.5e-20 101.7 150 38.0
BolC5t29803H Brassica oleracea HOM05D007482 ORTHO05D003038 4.5e-20 101.7 150 38.0
BolC8t52260H Brassica oleracea HOM05D007482 ORTHO05D003038 2.3e-19 99.4 122 44.3
AT1G12672 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 5.0e-19 98.2 126 48.4
BraA09t41719Z Brassica rapa HOM05D007482 ORTHO05D003038 5.0e-19 98.2 120 40.8
A09p63710 Brassica napus HOM05D007482 ORTHO05D003038 1.5e-18 96.7 124 39.5
Carub.0001s1236 Capsella rubella HOM05D007482 ORTHO05D003038 1.9e-18 96.3 129 41.9
CARHR182820 Cardamine hirsuta HOM05D007482 ORTHO05D003038 4.2e-18 95.1 96 47.9
BcaB08g34260 Brassica carinata HOM05D007482 ORTHO05D003038 9.5e-18 94.0 125 39.2
THA.LOC104823573 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 1.6e-17 93.2 115 42.6
BcaC01g02807 Brassica carinata HOM05D007482 ORTHO05D003038 6.1e-17 91.3 125 40.0
C03p60060 Brassica napus HOM05D007482 ORTHO05D003038 6.1e-17 91.3 125 40.0
BolC8t52262H Brassica oleracea HOM05D007482 ORTHO05D003038 6.1e-17 91.3 125 40.0
BcaC05g25121 Brassica carinata HOM05D007482 ORTHO05D003038 1.0e-16 90.5 123 39.0
BcaB08g34259 Brassica carinata HOM05D007482 ORTHO05D003038 1.8e-16 89.7 125 39.2
C08p47220 Brassica napus HOM05D007482 ORTHO05D003038 1.8e-16 89.7 125 39.2
BolC8t52261H Brassica oleracea HOM05D007482 ORTHO05D003038 1.8e-16 89.7 125 39.2
A06p32510 Brassica napus HOM05D007482 ORTHO05D003038 5.2e-16 88.2 125 39.2
BcaC05g25122 Brassica carinata HOM05D007482 ORTHO05D003038 2.0e-15 86.3 123 37.4
AL1G24120 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 2.6e-15 85.9 125 40.8
Sp1g11250 Schrenkiella parvula HOM05D007482 ORTHO05D003038 9.8e-15 84.0 125 36.8
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 9.8e-15 84.0 117 35.0
A09p63720 Brassica napus HOM05D007482 ORTHO05D003038 2.2e-14 82.8 125 37.6
BraA09t41720Z Brassica rapa HOM05D007482 ORTHO05D003038 2.2e-14 82.8 125 37.6
A06p09020 Brassica napus HOM05D007482 ORTHO05D003038 2.8e-14 82.4 124 36.3
BraA06t24091Z Brassica rapa HOM05D007482 ORTHO05D003038 2.8e-14 82.4 124 36.3
Thhalv10009322m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 2.8e-14 82.4 98 43.9
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 3.7e-14 82.0 122 37.7
AT1G12660 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 6.3e-14 81.3 127 38.6
Thhalv10009569m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 6.3e-14 81.3 108 40.7
C05p10620 Brassica napus HOM05D007482 ORTHO05D003038 8.3e-14 80.9 124 37.1
C08p47230 Brassica napus HOM05D007482 ORTHO05D003038 8.3e-14 80.9 102 40.2
BolC5t29804H Brassica oleracea HOM05D007482 ORTHO05D003038 8.3e-14 80.9 124 37.1
A09p63730 Brassica napus HOM05D007482 ORTHO05D003038 1.4e-13 80.1 102 40.2
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 1.8e-13 79.7 105 41.9
BraA06t26175Z Brassica rapa HOM05D007482 ORTHO05D003038 5.4e-13 78.2 102 39.2
BolC3t18270H Brassica oleracea HOM05D007482 ORTHO05D003038 7.0e-13 77.8 102 39.2
BolC8t52263H Brassica oleracea HOM05D007482 ORTHO05D003038 9.2e-13 77.4 112 37.5
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 5.9e-12 74.7 120 39.2
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 5.9e-12 74.7 111 39.6
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 5.9e-12 74.7 133 33.8
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 7.8e-12 74.3 116 36.2
PGSC0003DMG400016538 Solanum tuberosum HOM05D005672 ORTHO05D003038 7.8e-12 74.3 116 36.2
PSO339G2623 Papaver somniferum HOM05D007482 ORTHO05D003038 1.0e-11 73.9 115 34.8
Sopen06g025030 Solanum pennellii HOM05D005672 ORTHO05D003038 1.0e-11 73.9 116 36.2
Prupe.3G073000 Prunus persica HOM05D005672 ORTHO05D003038 1.3e-11 73.6 117 35.0
BolC8t52257H Brassica oleracea HOM05D007482 ORTHO05D003038 2.9e-11 72.4 50 68.0
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 2.9e-11 72.4 120 35.0
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 6.6e-11 71.2 110 34.5
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.5e-10 70.1 110 34.5
PSO339G0096 Papaver somniferum HOM05D007482 ORTHO05D003038 1.5e-10 70.1 116 33.6
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 2.5e-10 69.3 111 38.7
PSO648G0129 Papaver somniferum HOM05D007482 ORTHO05D003038 2.5e-10 69.3 114 34.2
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 3.3e-10 68.9 120 32.5
A09p63690 Brassica napus HOM05D007482 ORTHO05D003038 5.6e-10 68.2 54 68.5
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 7.3e-10 67.8 120 32.5
BcaC05g25168 Brassica carinata HOM05D007482 ORTHO05D003038 9.5e-10 67.4 104 33.7
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 9.5e-10 67.4 110 35.5
ClCG09G002230 Citrullus lanatus HOM05D005672 ORTHO05D003038 1.6e-09 66.6 96 36.5
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 1.6e-09 66.6 111 33.3
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 1.6e-09 66.6 98 39.8
AL1G24150 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 2.1e-09 66.2 83 43.4
CAN.G395.17 Capsicum annuum HOM05D005672 ORTHO05D003038 2.1e-09 66.2 121 36.4
CsaV3_7G033060 Cucumis sativus L. HOM05D005672 ORTHO05D003038 2.1e-09 66.2 94 35.1
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 2.8e-09 65.9 123 35.0
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 2.8e-09 65.9 123 35.0
Thecc.06G054500 Theobroma cacao HOM05D005672 ORTHO05D003038 2.8e-09 65.9 125 33.6
Duzib192G0281 Durio zibethinus HOM05D005672 ORTHO05D003038 3.6e-09 65.5 120 32.5
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 3.6e-09 65.5 123 35.0
PSO339G4707 Papaver somniferum HOM05D007482 ORTHO05D003038 3.6e-09 65.5 116 33.6
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 3.6e-09 65.5 117 32.5
MD17G1196900 Malus domestica HOM05D005672 ORTHO05D003038 4.7e-09 65.1 118 33.9
PSO782G2157 Papaver somniferum HOM05D005672 ORTHO05D003038 6.1e-09 64.7 117 29.9
PSO339G1026 Papaver somniferum HOM05D007482 ORTHO05D003038 8.0e-09 64.3 115 34.8
Nitab4.5_0002327g0030 Nicotiana tabacum HOM05D005672 ORTHO05D003038 2.3e-08 62.8 121 34.7
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 2.3e-08 62.8 91 35.2
Nitab4.5_0000351g0210 Nicotiana tabacum HOM05D005672 ORTHO05D003038 3.1e-08 62.4 119 35.3
PSO630G0001 Papaver somniferum HOM05D007482 ORTHO05D003038 3.1e-08 62.4 89 38.2
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 3.1e-08 62.4 112 33.0
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 3.1e-08 62.4 119 32.8
Thhalv10017433m.g Eutrema salsugineum HOM05D007482 ORTHO05D016827 4.0e-08 62.0 125 30.4
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 6.8e-08 61.2 111 32.4
Thhalv10019821m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 8.9e-08 60.8 124 29.8
Prupe.3G072700 Prunus persica HOM05D005672 ORTHO05D003038 1.2e-07 60.5 119 31.9
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.5e-07 60.1 116 32.8
Duzib235G0754 Durio zibethinus HOM05D005672 ORTHO05D003038 1.5e-07 60.1 127 29.9
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 2.0e-07 59.7 123 33.3
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 2.6e-07 59.3 118 30.5
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 3.4e-07 58.9 95 34.7
Atru.chr1.3244 Acer truncatum HOM05D005672 ORTHO05D003038 4.4e-07 58.5 99 36.4
Ciclev10027568m.g Citrus clementina HOM05D005672 ORTHO05D003038 4.4e-07 58.5 111 32.4
Aqoxy7G01810 Aquilegia oxysepala HOM05D005672 ORTHO05D003038 5.8e-07 58.2 115 28.7
Oeu006796.1 Olea europaea HOM05D005672 ORTHO05D003038 5.8e-07 58.2 117 35.0
Prupe.3G073100 Prunus persica HOM05D005672 ORTHO05D003038 5.8e-07 58.2 44 59.1
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 7.5e-07 57.8 122 30.3
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 1.3e-06 57.0 122 30.3
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 1.7e-06 56.6 117 30.8
Sed0004960 Sechium edule HOM05D005672 ORTHO05D003038 1.7e-06 56.6 90 33.3
Eucgr.J03009 Eucalyptus grandis HOM05D005672 ORTHO05D003038 2.2e-06 56.2 117 28.2
Sed0001381 Sechium edule HOM05D005672 ORTHO05D003038 2.2e-06 56.2 95 34.7
Prupe.3G073200 Prunus persica HOM05D005672 ORTHO05D003038 2.9e-06 55.8 111 34.2
COL.COLO4_30353 Corchorus olitorius HOM05D005672 ORTHO05D003038 3.7e-06 55.5 76 36.8
BraA06t24090Z Brassica rapa HOM05D007482 ORTHO05D003038 4.9e-06 55.1 169 27.8
Dinv30521 Davidia involucrata HOM05D005672 ORTHO05D003038 6.4e-06 54.7 118 29.7
PGR031G0657 Punica granatum HOM05D005672 ORTHO05D003038 6.4e-06 54.7 56 48.2
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 6.4e-06 54.7 116 31.0


User provided reference genes

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