Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p46830 Brassica napus HOM05D000051 ORTHO05D039583 8.2e-79 297.0 148 100.0
BcaC07g41667 Brassica carinata HOM05D000051 ORTHO05D039583 8.5e-52 207.2 101 100.0
BcaB08g34327 Brassica carinata HOM05D000051 ORTHO05D000015 5.9e-37 157.9 109 78.0
C08p46820 Brassica napus HOM05D000051 ORTHO05D000015 1.7e-36 156.4 112 76.8
BolC8t52220H Brassica oleracea HOM05D000051 ORTHO05D000015 3.8e-36 155.2 112 76.8
BcaB08g37456 Brassica carinata HOM05D000051 ORTHO05D000015 5.6e-35 151.4 109 73.4
BcaC07g41671 Brassica carinata HOM05D000051 ORTHO05D000015 5.6e-35 151.4 109 73.4
C08p46280 Brassica napus HOM05D000051 ORTHO05D000015 1.2e-34 150.2 109 74.3
BolC8t52177H Brassica oleracea HOM05D000051 ORTHO05D000015 1.2e-34 150.2 109 74.3
BcaC07g41622 Brassica carinata HOM05D000537 ORTHO05D000415 1.6e-34 149.8 109 75.2
BraA09t41687Z Brassica rapa HOM05D000051 ORTHO05D000015 1.6e-34 149.8 113 75.2
A09p62750 Brassica napus HOM05D000051 ORTHO05D000015 2.8e-34 149.1 109 73.4
BraA09t41639Z Brassica rapa HOM05D000051 ORTHO05D000015 2.8e-34 149.1 109 73.4
BolC8t52221H Brassica oleracea HOM05D000051 ORTHO05D000015 4.7e-34 148.3 109 74.3
A09p62770 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-33 146.4 114 72.8
BraA09t41641Z Brassica rapa HOM05D000051 ORTHO05D000015 1.8e-33 146.4 114 72.8
BcaB08g37460 Brassica carinata HOM05D000051 ORTHO05D000015 4.0e-33 145.2 109 74.3
BcaC07g41672 Brassica carinata HOM05D000537 ORTHO05D000415 4.0e-33 145.2 109 74.3
C08p46860 Brassica napus HOM05D000051 ORTHO05D000015 7.5e-32 141.0 109 72.5
BcaB08g34325 Brassica carinata HOM05D000051 ORTHO05D000015 1.7e-31 139.8 101 71.3
A09p62740 Brassica napus HOM05D000051 ORTHO05D000015 3.2e-30 135.6 112 70.5
BraA09t41638Z Brassica rapa HOM05D000051 ORTHO05D000015 3.2e-30 135.6 112 70.5
A09p63380 Brassica napus HOM05D000051 ORTHO05D000015 4.1e-30 135.2 113 70.8
BraA09t41688Z Brassica rapa HOM05D000051 ORTHO05D000015 4.1e-30 135.2 113 70.8
BcaB02g10549 Brassica carinata HOM05D000051 ORTHO05D000015 7.0e-30 134.4 112 70.5
BcaB08g37455 Brassica carinata HOM05D000051 ORTHO05D000015 2.0e-29 132.9 112 69.6
A09p62710 Brassica napus HOM05D000051 ORTHO05D000015 2.6e-24 115.9 110 62.7
Thhalv10007600m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.6e-24 115.9 108 54.6
BraA09t41636Z Brassica rapa HOM05D000051 ORTHO05D000015 4.9e-23 111.7 110 60.9
BcaB02g06477 Brassica carinata HOM05D000051 ORTHO05D000015 3.2e-22 109.0 109 55.0
A09p62720 Brassica napus HOM05D000051 ORTHO05D000015 4.1e-22 108.6 120 55.0
BcaB08g37454 Brassica carinata HOM05D000537 ORTHO05D000415 4.6e-21 105.1 90 67.8
C05p11630 Brassica napus HOM05D000051 ORTHO05D000015 4.6e-21 105.1 121 53.7
A06p09870 Brassica napus HOM05D000051 ORTHO05D000015 6.0e-21 104.8 146 47.3
BraA06t24176Z Brassica rapa HOM05D000051 ORTHO05D000015 1.3e-20 103.6 107 52.3
A06p09880 Brassica napus HOM05D000051 ORTHO05D000015 2.3e-20 102.8 107 52.3
BraA06t24175Z Brassica rapa HOM05D000051 ORTHO05D000015 2.3e-20 102.8 121 52.9
C05p11640 Brassica napus HOM05D000051 ORTHO05D000015 3.0e-20 102.4 111 52.3
BolC5t29911H Brassica oleracea HOM05D000051 ORTHO05D000015 3.0e-20 102.4 111 52.3
AL1G25580 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.9e-20 102.1 111 50.5
BcaC05g25285 Brassica carinata HOM05D000051 ORTHO05D000015 4.3e-19 98.6 114 50.0
BolC5t29909H Brassica oleracea HOM05D000051 ORTHO05D000015 1.2e-18 97.1 114 49.1
CARHR014170 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.6e-18 95.5 111 48.6
A06p09830 Brassica napus HOM05D000051 ORTHO05D000015 6.2e-18 94.7 107 50.5
BraA06t24173Z Brassica rapa HOM05D000051 ORTHO05D000015 3.1e-17 92.4 107 48.6
AT1G13780 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.2e-17 91.7 111 46.8
AL6G39170 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.8e-17 91.3 112 50.9
AT5G27750 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.2e-16 90.5 118 46.6
Carub.0006s2480 Capsella rubella HOM05D000051 ORTHO05D000015 6.4e-15 84.7 107 46.7
BcaB08g34328 Brassica carinata HOM05D000537 ORTHO05D000415 2.3e-12 76.3 64 67.2
AL3G54200 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 8.1e-10 67.8 91 47.3
BcaB02g06476 Brassica carinata HOM05D000051 ORTHO05D000015 3.4e-08 62.4 91 45.1
CARHR094510 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.4e-08 62.0 129 36.4
AL8G14520 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.4e-07 58.2 109 39.4
AL8G14470 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.9e-06 56.6 108 36.1
AL8G14510 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.2e-06 55.5 120 35.8
BcaC06g34423 Brassica carinata HOM05D000051 ORTHO05D000015 5.4e-06 55.1 106 39.6
BolC7t43405H Brassica oleracea HOM05D000051 ORTHO05D000015 5.4e-06 55.1 106 39.6


User provided reference genes

Program Settings