Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p42710 Brassica napus HOM05D011556 ORTHO05D014123 2.1e-163 578.9 293 100.0
C02p10230 Brassica napus HOM05D011556 ORTHO05D014123 2.3e-141 505.8 335 81.8
BolC2t06272H Brassica oleracea HOM05D011556 ORTHO05D014123 4.3e-140 501.5 335 81.5
C07p15790 Brassica napus HOM05D011556 ORTHO05D014123 1.6e-139 499.6 335 80.9
A09p03830 Brassica napus HOM05D011556 ORTHO05D014123 4.1e-138 495.0 335 80.6
BraA02t06231Z Brassica rapa HOM05D011556 ORTHO05D014123 4.8e-123 444.9 378 66.7
C08p49870 Brassica napus HOM05D011556 ORTHO05D041066 1.3e-83 313.9 293 63.8
BolC8t52515H Brassica oleracea HOM05D011556 ORTHO05D041066 2.9e-83 312.8 293 63.8
A05p04300 Brassica napus HOM05D011556 ORTHO05D014123 2.2e-75 286.6 228 70.2
BolC3t14527H Brassica oleracea HOM05D011556 ORTHO05D014123 3.1e-61 239.6 273 55.7
BcaC01g05886 Brassica carinata HOM05D011556 ORTHO05D014123 2.1e-57 226.9 222 59.5
A10p23680 Brassica napus HOM05D011556 ORTHO05D014123 8.7e-56 221.5 173 70.5
C02p63430 Brassica napus HOM05D014255 ORTHO05D015450 5.7e-31 139.0 157 56.7
BolC2t12410H Brassica oleracea HOM05D014255 ORTHO05D015450 5.7e-31 139.0 157 56.7
C03p32540 Brassica napus HOM05D014255 ORTHO05D015450 1.6e-30 137.5 157 56.7
C04p72720 Brassica napus HOM05D009754 ORTHO05D014123 1.4e-26 124.4 145 57.2
BolC2t10052H Brassica oleracea HOM05D011556 ORTHO05D014123 1.4e-26 124.4 112 64.3
C08p35010 Brassica napus HOM05D009754 ORTHO05D033217 1.5e-23 114.4 140 50.7
C05p02990 Brassica napus HOM05D009754 ORTHO05D101014 1.1e-21 108.2 126 56.3
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 1.2e-20 104.8 160 44.4
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 4.5e-20 102.8 146 45.2
BcaC01g00510 Brassica carinata HOM05D010948 ORTHO05D039443 1.0e-19 101.7 142 43.0
BcaB07g33645 Brassica carinata HOM05D010893 ORTHO05D014123 8.5e-19 98.6 113 49.6
BcaB01g05924 Brassica carinata HOM05D010948 ORTHO05D013805 5.5e-18 95.9 294 33.0
C03p80810 Brassica napus HOM05D010948 ORTHO05D039443 9.4e-18 95.1 95 54.7
BraA06t23408Z Brassica rapa HOM05D001897 ORTHO05D001953 1.6e-17 94.4 86 54.7
C04p32520 Brassica napus HOM05D011556 ORTHO05D014123 2.7e-17 93.6 84 61.9
BcaC06g35412 Brassica carinata HOM05D010893 ORTHO05D016035 6.1e-17 92.4 103 50.5
BolC4t28775H Brassica oleracea HOM05D011556 ORTHO05D014123 7.9e-17 92.0 107 54.2
C03p25990 Brassica napus HOM05D010948 ORTHO05D013805 1.0e-16 91.7 147 41.5
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 1.0e-16 91.7 154 42.9
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 1.4e-16 91.3 146 42.5
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 1.8e-16 90.9 145 44.1
A07p28660 Brassica napus HOM05D010948 ORTHO05D013805 1.8e-16 90.9 193 43.5
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 1.8e-16 90.9 146 42.5
C07p18370 Brassica napus HOM05D009754 ORTHO05D033217 1.8e-16 90.9 90 54.4
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 1.8e-16 90.9 145 44.1
A03p59560 Brassica napus HOM05D010948 ORTHO05D013805 3.9e-16 89.7 179 41.9
BcaC02g11825 Brassica carinata HOM05D017424 ORTHO05D094481 6.7e-16 89.0 86 51.2
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 8.8e-16 88.6 145 43.4
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 1.5e-15 87.8 146 40.4
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 1.5e-15 87.8 145 42.8
BcaB07g31310 Brassica carinata HOM05D029219 ORTHO05D091766 2.0e-15 87.4 93 57.0
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 4.3e-15 86.3 145 42.1
BcaB03g13577 Brassica carinata HOM05D017424 ORTHO05D032352 5.7e-15 85.9 127 42.5
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 1.3e-14 84.7 145 42.1
BcaC07g39633 Brassica carinata HOM05D017424 ORTHO05D039094 1.3e-14 84.7 143 42.7
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 1.7e-14 84.3 144 39.6
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 2.8e-14 83.6 154 41.6
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 4.8e-14 82.8 145 42.8
BolC4t28028H Brassica oleracea HOM05D000722 ORTHO05D000025 3.4e-12 76.6 79 51.9
BolC9t55422H Brassica oleracea HOM05D010948 ORTHO05D013805 3.4e-12 76.6 134 42.5
BcaC08g46504 Brassica carinata HOM05D009754 ORTHO05D027209 7.7e-12 75.5 154 39.6
C02p26940 Brassica napus HOM05D011556 ORTHO05D101344 1.3e-11 74.7 54 75.9
C06p45540 Brassica napus HOM05D017424 ORTHO05D032352 1.1e-10 71.6 53 62.3
A01p00100 Brassica napus HOM05D010948 ORTHO05D013805 2.5e-10 70.5 185 34.1
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 3.2e-10 70.1 146 39.7
C03p51770 Brassica napus HOM05D010948 ORTHO05D013805 1.2e-09 68.2 95 47.4
BcaB04g21169 Brassica carinata HOM05D014255 ORTHO05D015450 4.7e-09 66.2 58 58.6
C07p10670 Brassica napus HOM05D009935 ORTHO05D012055 1.5e-07 61.2 55 58.2


User provided reference genes

Program Settings