Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p42690 Brassica napus HOM05D002382 ORTHO05D019928 8.6e-70 266.9 141 100.0
BolC4t27349H Brassica oleracea HOM05D002382 ORTHO05D019928 4.5e-42 174.9 95 95.8
BraA05t21282Z Brassica rapa HOM05D002382 ORTHO05D019928 3.0e-38 162.2 93 90.3
A07p05980 Brassica napus HOM05D002382 ORTHO05D019928 3.9e-30 135.2 79 88.6
A05p24030 Brassica napus HOM05D002382 ORTHO05D019928 2.2e-28 129.4 74 91.9
BcaC07g41265 Brassica carinata HOM05D002382 ORTHO05D019928 3.4e-18 95.5 54 94.4
C04p58210 Brassica napus HOM05D002382 ORTHO05D000411 3.4e-18 95.5 54 94.4
BolC1t04290H Brassica oleracea HOM05D002382 ORTHO05D019928 3.4e-18 95.5 54 94.4
BcaB03g12607 Brassica carinata HOM05D002382 ORTHO05D002622 7.0e-11 71.2 57 73.7
BcaC01g01170 Brassica carinata HOM05D002382 ORTHO05D002622 7.0e-11 71.2 57 73.7
BcaNung00475 Brassica carinata HOM05D002382 ORTHO05D002622 7.0e-11 71.2 57 73.7
A03p58940 Brassica napus HOM05D002382 ORTHO05D002622 7.0e-11 71.2 57 73.7
A08p19680 Brassica napus HOM05D002382 ORTHO05D002622 7.0e-11 71.2 57 73.7
BolC3t21240H Brassica oleracea HOM05D002382 ORTHO05D002622 7.0e-11 71.2 57 73.7
BraA03t14954Z Brassica rapa HOM05D002382 ORTHO05D002622 7.0e-11 71.2 57 73.7
BraA08t33926Z Brassica rapa HOM05D002382 ORTHO05D002622 7.0e-11 71.2 57 73.7
C03p89300 Brassica napus HOM05D002382 ORTHO05D002622 9.1e-11 70.9 53 79.2
A01p08620 Brassica napus HOM05D002382 ORTHO05D002622 7.7e-10 67.8 57 70.2
C01p10090 Brassica napus HOM05D002382 ORTHO05D002622 7.7e-10 67.8 57 70.2
BolC1t00967H Brassica oleracea HOM05D002382 ORTHO05D002622 7.7e-10 67.8 57 70.2
BolC8t51809H Brassica oleracea HOM05D002382 ORTHO05D002622 1.0e-09 67.4 57 66.7
Sp7g27290 Schrenkiella parvula HOM05D002382 ORTHO05D002622 1.0e-09 67.4 57 70.2
BcaB03g16754 Brassica carinata HOM05D002382 ORTHO05D002622 1.7e-09 66.6 57 66.7
BcaB08g34878 Brassica carinata HOM05D002382 ORTHO05D002622 1.7e-09 66.6 57 66.7
BcaC06g36612 Brassica carinata HOM05D002382 ORTHO05D002622 1.7e-09 66.6 57 66.7
A09p59190 Brassica napus HOM05D002382 ORTHO05D002622 1.7e-09 66.6 57 66.7
C07p02170 Brassica napus HOM05D002382 ORTHO05D002622 1.7e-09 66.6 57 66.7
C09p14830 Brassica napus HOM05D002382 ORTHO05D002622 1.7e-09 66.6 57 66.7
BolC7t40626H Brassica oleracea HOM05D002382 ORTHO05D002622 1.7e-09 66.6 57 66.7
BolC9t54383H Brassica oleracea HOM05D002382 ORTHO05D002622 1.7e-09 66.6 57 66.7
BraA09t36896Z Brassica rapa HOM05D002382 ORTHO05D002622 1.7e-09 66.6 57 66.7
BraA09t41303Z Brassica rapa HOM05D002382 ORTHO05D002622 1.7e-09 66.6 57 66.7
AL7G22990 Arabidopsis lyrata HOM05D002382 ORTHO05D002622 2.9e-09 65.9 57 66.7
BcaC04g22833 Brassica carinata HOM05D002382 ORTHO05D002622 3.8e-09 65.5 52 73.1
A07p01010 Brassica napus HOM05D002382 ORTHO05D002622 3.8e-09 65.5 53 71.7
BraA07t27902Z Brassica rapa HOM05D002382 ORTHO05D002622 3.8e-09 65.5 57 64.9
AL3G48510 Arabidopsis lyrata HOM05D002382 ORTHO05D002622 5.0e-09 65.1 57 64.9
AT2G19730 Arabidopsis thaliana HOM05D002382 ORTHO05D002622 5.0e-09 65.1 57 64.9
Carub.0003s3401 Capsella rubella HOM05D002382 ORTHO05D002622 5.0e-09 65.1 57 64.9
Thhalv10026507m.g Eutrema salsugineum HOM05D002382 ORTHO05D002622 6.5e-09 64.7 57 66.7
BcaC07g41242 Brassica carinata HOM05D002382 ORTHO05D002622 8.5e-09 64.3 57 64.9
C08p42480 Brassica napus HOM05D002382 ORTHO05D002622 8.5e-09 64.3 57 64.9
Thhalv10002093m.g Eutrema salsugineum HOM05D002382 ORTHO05D002622 8.5e-09 64.3 57 64.9
Sp3g33060 Schrenkiella parvula HOM05D002382 ORTHO05D002622 8.5e-09 64.3 57 64.9
BcaB01g02503 Brassica carinata HOM05D002382 ORTHO05D002622 2.5e-08 62.8 49 75.5
CARHR110180 Cardamine hirsuta HOM05D002382 ORTHO05D002622 3.2e-08 62.4 57 63.2
Aa31LG2G21020 Aethionema arabicum HOM05D002382 ORTHO05D002622 4.2e-08 62.0 57 64.9
Aa31LG8G16700 Aethionema arabicum HOM05D002382 ORTHO05D002622 7.2e-08 61.2 57 61.4
THA.LOC104803990 Tarenaya hassleriana HOM05D002382 ORTHO05D002622 1.6e-07 60.1 52 71.2
Carub.0007s1113 Capsella rubella HOM05D002382 ORTHO05D002622 2.1e-07 59.7 57 61.4
AT4G29410 Arabidopsis thaliana HOM05D002382 ORTHO05D002622 4.7e-07 58.5 57 59.6
THA.LOC104814597 Tarenaya hassleriana HOM05D002382 ORTHO05D002622 4.7e-07 58.5 57 64.9
BcaC07g39149 Brassica carinata HOM05D002382 ORTHO05D002622 6.1e-07 58.2 96 46.9
TWI32G1202 Tripterygium wilfordii HOM05D002382 ORTHO05D002622 2.3e-06 56.2 52 67.3
BcaB07g32696 Brassica carinata HOM05D002382 ORTHO05D002622 4.0e-06 55.5 38 78.9


User provided reference genes

Program Settings