Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p41940 Brassica napus HOM05D004655 ORTHO05D005567 4.7e-158 561.2 296 100.0
BcaC07g41186 Brassica carinata HOM05D004655 ORTHO05D005567 7.4e-156 553.9 296 98.6
BolC8t51757H Brassica oleracea HOM05D004655 ORTHO05D005567 7.4e-156 553.9 296 98.6
A09p58650 Brassica napus HOM05D004655 ORTHO05D005567 2.2e-152 542.3 297 97.6
BraA09t41251Z Brassica rapa HOM05D004655 ORTHO05D005567 2.2e-152 542.3 297 97.6
BcaB08g34948 Brassica carinata HOM05D004655 ORTHO05D005567 1.3e-144 516.5 298 93.3
Sp3g34160 Schrenkiella parvula HOM05D004655 ORTHO05D005567 1.3e-139 500.0 297 89.6
Thhalv10002049m.g Eutrema salsugineum HOM05D004655 ORTHO05D005567 2.7e-137 492.3 302 89.4
AL3G54160 Arabidopsis lyrata HOM05D004655 ORTHO05D005567 6.3e-131 471.1 295 85.1
AT2G20890 Arabidopsis thaliana HOM05D004655 ORTHO05D005567 2.3e-128 462.6 296 84.5
CARHR111640 Cardamine hirsuta HOM05D004655 ORTHO05D005567 3.8e-128 461.8 295 84.4
Aa31LG8G17800 Aethionema arabicum HOM05D004655 ORTHO05D005567 1.1e-127 460.3 293 83.3
Carub.0003s3556 Capsella rubella HOM05D004655 ORTHO05D005567 3.3e-127 458.8 297 85.2
THA.LOC104804073 Tarenaya hassleriana HOM05D004655 ORTHO05D005567 1.6e-118 429.9 289 78.5
MELO3C018772.2 Cucumis melo HOM05D004655 ORTHO05D005567 3.1e-109 399.1 295 72.9
Gohir.A04G106100 Gossypium hirsutum HOM05D004655 ORTHO05D005567 4.0e-109 398.7 299 71.2
Gorai.012G132100 Gossypium raimondii HOM05D004655 ORTHO05D005567 1.2e-108 397.1 299 71.2
Gohir.D04G146200 Gossypium hirsutum HOM05D004655 ORTHO05D005567 3.4e-108 395.6 299 70.9
Duzib132G0437 Durio zibethinus HOM05D004655 ORTHO05D005567 4.4e-108 395.2 293 73.0
Duzib132G0466 Durio zibethinus HOM05D004655 ORTHO05D005567 4.4e-108 395.2 293 73.0
Thecc.02G170400 Theobroma cacao HOM05D004655 ORTHO05D005567 4.4e-108 395.2 299 71.9
Sed0025834 Sechium edule HOM05D004655 ORTHO05D005567 1.7e-107 393.3 300 71.0
Actinidia12466 Actinidia chinensis HOM05D004655 ORTHO05D005567 2.2e-107 392.9 292 73.6
QL08p036998 Quercus lobata HOM05D004655 ORTHO05D005567 2.2e-107 392.9 290 72.1
ClCG00G002920 Citrullus lanatus HOM05D004655 ORTHO05D005567 8.3e-107 391.0 294 72.8
ClCG02G001360 Citrullus lanatus HOM05D004655 ORTHO05D005567 8.3e-107 391.0 294 72.8
RcHm_v2.0_Chr2g0161411 Rosa chinensis HOM05D004655 ORTHO05D005567 8.3e-107 391.0 290 73.8
CsaV3_7G004070 Cucumis sativus L. HOM05D004655 ORTHO05D005567 1.9e-106 389.8 294 71.8
MD09G1097200 Malus domestica HOM05D004655 ORTHO05D005567 3.2e-106 389.0 293 71.0
COL.COLO4_13659 Corchorus olitorius HOM05D004655 ORTHO05D005567 5.4e-106 388.3 294 72.1
Dinv13829 Davidia involucrata HOM05D004655 ORTHO05D005567 5.4e-106 388.3 293 73.0
Migut.H01014 Erythranthe guttata HOM05D004655 ORTHO05D005567 5.4e-106 388.3 289 70.9
FvH4_6g44420 Fragaria vesca HOM05D004655 ORTHO05D005567 5.4e-106 388.3 290 72.8
Manes.13G152400 Manihot esculenta HOM05D004655 ORTHO05D005567 7.1e-106 387.9 292 71.6
FAN14G2207 Fragaria x ananassa HOM05D004655 ORTHO05D005567 9.2e-106 387.5 290 72.8
AUR62037119 Chenopodium quinoa HOM05D004655 ORTHO05D005567 1.6e-105 386.7 291 72.9
Lalb_Chr01g0005451 Lupinus albus HOM05D004655 ORTHO05D005567 1.6e-105 386.7 257 76.7
MD17G1085500 Malus domestica HOM05D004655 ORTHO05D005567 4.6e-105 385.2 300 68.3
EL10Ac9g20731 Beta vulgaris HOM05D004655 ORTHO05D005567 1.0e-104 384.0 288 72.2
Lsat_1_v5_gn_3_40720 Lactuca sativa HOM05D004655 ORTHO05D005567 1.3e-104 383.6 312 67.3
arahy.Tifrunner.gnm1.ann1.XZ54ZU Arachis hypogaea HOM05D004655 ORTHO05D005567 1.7e-104 383.3 294 71.8
Prupe.3G228700 Prunus persica HOM05D004655 ORTHO05D005567 1.7e-104 383.3 287 71.4
Actinidia18535 Actinidia chinensis HOM05D004655 ORTHO05D005567 2.3e-104 382.9 292 71.9
arahy.Tifrunner.gnm1.ann1.YR7HYJ Arachis hypogaea HOM05D004655 ORTHO05D005567 2.3e-104 382.9 294 71.4
Lalb_Chr22g0356311 Lupinus albus HOM05D004655 ORTHO05D005567 2.3e-104 382.9 285 73.3
TWI36G0222 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 2.3e-104 382.9 292 69.9
VMungo1080G0396 Vigna mungo HOM05D004655 ORTHO05D005567 3.9e-104 382.1 243 79.8
MSTRG.14176 Avicennia marina HOM05D004655 ORTHO05D005567 6.6e-104 381.3 288 69.8
FAN02G3511 Fragaria x ananassa HOM05D004655 ORTHO05D005567 6.6e-104 381.3 291 72.5
FAN05G4368 Fragaria x ananassa HOM05D004655 ORTHO05D005567 6.6e-104 381.3 291 72.5
Ciclev10016098m.g Citrus clementina HOM05D004655 ORTHO05D005567 8.6e-104 380.9 306 68.0
Glyma.12G200200 Glycine max HOM05D004655 ORTHO05D005567 1.1e-103 380.6 291 72.5
Ca_01544_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 1.5e-103 380.2 288 70.5
FAN02G1121 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.5e-103 380.2 291 71.8
PGR042G1100 Punica granatum HOM05D004655 ORTHO05D005567 1.5e-103 380.2 292 69.5
CSS0017466 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 1.9e-103 379.8 291 70.8
Potri.013G148400 Populus trichocarpa HOM05D004655 ORTHO05D005567 2.5e-103 379.4 294 71.4
Lj3g0013026 Lotus japonicus HOM05D004655 ORTHO05D005567 4.3e-103 378.6 291 72.2
Nn1g03859 Nelumbo nucifera HOM05D004655 ORTHO05D005567 4.3e-103 378.6 292 68.5
Phvul.005G108600 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 4.3e-103 378.6 292 70.9
GSVIVG01029990001 Vitis vinifera HOM05D004655 ORTHO05D005567 4.3e-103 378.6 234 81.6
Atru.chr6.3084 Acer truncatum HOM05D004655 ORTHO05D005567 5.6e-103 378.3 295 68.5
Glyma.13G302100 Glycine max HOM05D004655 ORTHO05D005567 5.6e-103 378.3 291 71.5
Medtr4g045980 Medicago truncatula HOM05D004655 ORTHO05D005567 1.2e-102 377.1 301 68.4
AUR62032763 Chenopodium quinoa HOM05D004655 ORTHO05D005567 1.6e-102 376.7 288 72.2
arahy.Tifrunner.gnm1.ann1.81TW8H Arachis hypogaea HOM05D004655 ORTHO05D005567 4.7e-102 375.2 249 74.7
arahy.Tifrunner.gnm1.ann1.S2JPPU Arachis hypogaea HOM05D004655 ORTHO05D005567 4.7e-102 375.2 249 75.1
Eucgr.A01774 Eucalyptus grandis HOM05D004655 ORTHO05D005567 4.7e-102 375.2 307 67.8
Psat5g269080 Pisum sativum HOM05D004655 ORTHO05D005567 4.7e-102 375.2 273 73.6
TWI75G0473 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 6.2e-102 374.8 292 67.8
HanXRQChr06g0171121 Helianthus annuus HOM05D004655 ORTHO05D005567 8.1e-102 374.4 290 70.0
CiPaw.04G122300 Carya illinoinensis HOM05D004655 ORTHO05D005567 1.1e-101 374.0 291 68.7
TPR.G18073 Trifolium pratense HOM05D004655 ORTHO05D005567 1.8e-101 373.2 293 70.6
Ah.01g005210 Amaranthus hybridus HOM05D004655 ORTHO05D005567 4.0e-101 372.1 290 69.3
Psat7g149680 Pisum sativum HOM05D004655 ORTHO05D005567 4.0e-101 372.1 239 78.7
Sopen07g028730 Solanum pennellii HOM05D004655 ORTHO05D005567 8.9e-101 370.9 289 67.5
ATR0693G119 Amborella trichopoda HOM05D004655 ORTHO05D005567 1.2e-100 370.5 293 67.6
Hma1.2p1_0662F.1_g198360 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 1.2e-100 370.5 291 70.8
unitig_21.g20001 Utricularia gibba HOM05D004655 ORTHO05D005567 1.2e-100 370.5 293 67.2
Glyma.12G106600 Glycine max HOM05D004655 ORTHO05D005567 1.5e-100 370.2 290 70.0
PGSC0003DMG400018330 Solanum tuberosum HOM05D004655 ORTHO05D005567 1.5e-100 370.2 289 67.1
Cfa014528 Carpinus fangiana HOM05D004655 ORTHO05D005567 2.0e-100 369.8 246 76.4
Lj3g0017119 Lotus japonicus HOM05D004655 ORTHO05D005567 2.6e-100 369.4 293 66.9
Potri.019G117900 Populus trichocarpa HOM05D004655 ORTHO05D005567 3.4e-100 369.0 291 68.0
PSO675G0243 Papaver somniferum HOM05D004655 ORTHO05D005567 4.4e-100 368.6 289 68.2
MBI18_g27693_MAGBIO Magnolia biondii HOM05D004655 ORTHO05D005567 5.8e-100 368.2 289 68.2
TPR.G21652 Trifolium pratense HOM05D004655 ORTHO05D005567 5.8e-100 368.2 255 74.5
TAR627G0814 Trochodendron aralioides HOM05D004655 ORTHO05D005567 5.8e-100 368.2 291 69.8
TAR629G1482 Trochodendron aralioides HOM05D004655 ORTHO05D005567 5.8e-100 368.2 291 69.1
CANSAT64G1156 Cannabis sativa HOM05D004655 ORTHO05D005567 9.9e-100 367.5 291 68.4
Cc05_g06070 Coffea canephora HOM05D004655 ORTHO05D005567 9.9e-100 367.5 241 77.2
Glyma.06G299100 Glycine max HOM05D004655 ORTHO05D005567 1.3e-99 367.1 289 69.2
DCAR_012973 Daucus carota HOM05D004655 ORTHO05D005567 1.7e-99 366.7 289 67.8
PSO541G1277 Papaver somniferum HOM05D004655 ORTHO05D005567 2.9e-99 365.9 289 67.8
vmacro12257 Vaccinium macrocarpon HOM05D004655 ORTHO05D005567 8.4e-99 364.4 293 68.3
VMungo1127G2245 Vigna mungo HOM05D004655 ORTHO05D005567 1.4e-98 363.6 240 77.1
Sc12g0002690 Simmondsia chinensis HOM05D004655 ORTHO05D005567 1.9e-98 363.2 284 69.4
CiPaw.03G168300 Carya illinoinensis HOM05D004655 ORTHO05D005567 3.2e-98 362.5 299 65.2
Os07g0558500 Oryza sativa ssp. japonica HOM05D004655 ORTHO05D005567 3.2e-98 362.5 285 69.1
Lj1C737G5 Lonicera japonica HOM05D004655 ORTHO05D005567 4.1e-98 362.1 322 63.4
Phvul.011G110700 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 2.1e-97 359.8 240 77.1
Zm00001eb324100 Zea mays HOM05D004655 ORTHO05D005567 2.1e-97 359.8 291 67.4
CSS0020863 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 4.6e-97 358.6 291 67.0
ECA246G4617 Erigeron canadensis HOM05D004655 ORTHO05D005567 7.8e-97 357.8 294 67.0
CSS0004933 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 1.3e-96 357.1 291 66.7
Rhsim06G0153100 Rhododendron simsii HOM05D004655 ORTHO05D005567 1.7e-96 356.7 316 64.2
Medtr2g089795 Medicago truncatula HOM05D004655 ORTHO05D005567 2.3e-96 356.3 286 68.2
SGA_v2.0_scaffold70G23458 Striga asiatica HOM05D004655 ORTHO05D005567 3.9e-96 355.5 268 71.3
Aqoxy1G03905 Aquilegia oxysepala HOM05D004655 ORTHO05D005567 5.1e-96 355.1 290 68.3
Hma1.2p1_0565F.1_g179650 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 1.5e-95 353.6 293 68.3
Nn1g06795 Nelumbo nucifera HOM05D004655 ORTHO05D005567 1.9e-95 353.2 272 69.1
Nn1g06798 Nelumbo nucifera HOM05D004655 ORTHO05D005567 1.9e-95 353.2 272 69.1
HPP92_012362 Vanilla planifolia HOM05D004655 ORTHO05D005567 1.2e-94 350.5 288 65.6
SGA_v2.0_scaffold34G13911 Striga asiatica HOM05D004655 ORTHO05D005567 4.7e-94 348.6 352 59.9
DCAR_019200 Daucus carota HOM05D004655 ORTHO05D005567 6.2e-94 348.2 226 77.9
Ca_20707_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 8.1e-94 347.8 271 70.1
Sabra19G0118300 Salix brachista HOM05D004655 ORTHO05D005567 1.5e-92 343.6 339 57.8
SalBow7G2858 Salvia bowleyana HOM05D004655 ORTHO05D005567 1.5e-92 343.6 266 68.4
Sabra19G0135300 Salix brachista HOM05D004655 ORTHO05D005567 3.4e-92 342.4 339 57.8
CAN.G508.2 Capsicum annuum HOM05D004655 ORTHO05D005567 7.6e-92 341.3 220 77.3
SalBow1G2826 Salvia bowleyana HOM05D004655 ORTHO05D005567 7.6e-92 341.3 229 74.2
Haze_13070 Corylus avellana HOM05D004655 ORTHO05D005567 1.3e-91 340.5 308 60.4
Duzib052G1220 Durio zibethinus HOM05D004655 ORTHO05D005567 1.0e-88 330.9 298 63.8
Peaxi162Scf00007g02516 Petunia axillaris HOM05D004655 ORTHO05D005567 1.9e-87 326.6 324 58.3
Sabra13G0119700 Salix brachista HOM05D004655 ORTHO05D005567 2.5e-87 326.2 292 64.7
Nitab4.5_0000769g0070 Nicotiana tabacum HOM05D004655 ORTHO05D005567 3.1e-85 319.3 295 62.4
Lj8C118T0 Lonicera japonica HOM05D004655 ORTHO05D005567 8.4e-83 311.2 226 73.5
Duzib248G0290 Durio zibethinus HOM05D004655 ORTHO05D005567 1.1e-82 310.8 196 80.6
Nitab4.5_0001019g0090 Nicotiana tabacum HOM05D004655 ORTHO05D005567 1.4e-82 310.5 215 75.3
Pp3c19_17570 Physcomitrium patens HOM05D004655 ORTHO05D005567 3.2e-82 309.3 230 66.1
Pp3c21_14540 Physcomitrium patens HOM05D004655 ORTHO05D005567 1.6e-81 307.0 303 54.8
AagrBONN_evm.TU.Sc2ySwM_344.251 Anthoceros agrestis HOM05D004655 ORTHO05D005567 1.0e-80 304.3 240 65.0
FAN09G1462 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.9e-79 300.1 291 61.5
Mapoly0010s0156 Marchantia polymorpha HOM05D004655 ORTHO05D005567 1.1e-77 294.3 296 56.1
SMO266G0053 Selaginella moellendorffii HOM05D004655 ORTHO05D005567 5.3e-77 292.0 201 70.6
Zm00001eb106830 Zea mays HOM05D004655 ORTHO05D005567 2.6e-76 289.7 188 78.7
Sc12g0003940 Simmondsia chinensis HOM05D004655 ORTHO05D005567 6.4e-75 285.0 227 67.0
Ah.01g014420 Amaranthus hybridus HOM05D004655 ORTHO05D005567 1.2e-73 280.8 229 66.8
AUR62032764 Chenopodium quinoa HOM05D001718 ORTHO05D008006 2.1e-73 280.0 261 60.2
AUR62037125 Chenopodium quinoa HOM05D001718 ORTHO05D008006 7.9e-73 278.1 261 60.2
Cpa.g.sc34.80 Carica papaya HOM05D004655 ORTHO05D005567 2.0e-60 236.9 190 66.8
Dinv15502 Davidia involucrata HOM05D004655 ORTHO05D005567 5.0e-59 232.3 187 69.0
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 1.3e-56 224.2 227 50.7
CBR_g78876 Chara braunii HOM05D004655 ORTHO05D005567 1.5e-55 220.7 240 49.2
CDE05G0437 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 7.2e-50 201.8 151 66.9
Cre13.g562850 Chlamydomonas reinhardtii HOM05D004655 ORTHO05D005567 3.9e-48 196.1 220 48.2
CDE05G0433 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 2.0e-47 193.7 180 60.0
SEGI_32441 Sequoiadendron giganteum HOM05D004655 ORTHO05D005567 8.8e-40 168.3 165 58.2
MCO07G428 Micromonas commoda HOM05D004655 ORTHO05D005567 2.0e-39 167.2 263 39.5
VMungo0720G1089 Vigna mungo HOM05D004655 ORTHO05D005567 7.0e-21 105.5 59 88.1
Cpa.g.sc34.79 Carica papaya HOM05D004655 ORTHO05D005567 1.3e-19 101.3 66 80.3
ClCG02G001370 Citrullus lanatus HOM05D004655 ORTHO05D005567 2.5e-18 97.1 66 78.8
Sed0002097 Sechium edule HOM05D004655 ORTHO05D005567 4.0e-16 89.7 288 33.0
Oeu029438.1 Olea europaea HOM05D004655 ORTHO05D005567 1.4e-13 81.3 113 41.6
Sabra19G0118700 Salix brachista HOM05D004655 ORTHO05D005567 1.3e-11 74.7 114 43.9
Hma1.2p1_0479F.1_g161430 Hydrangea macrophylla HOM05D001315 ORTHO05D001618 9.5e-10 68.6 56 64.3


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