Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p41710 Brassica napus HOM05D009526 ORTHO05D011552 4.7e-86 321.2 173 100.0
BolC8t51734H Brassica oleracea HOM05D009526 ORTHO05D011552 1.1e-82 310.1 173 97.1
A09p58360 Brassica napus HOM05D009526 ORTHO05D011552 5.6e-79 297.7 173 92.5
BraA09t41228Z Brassica rapa HOM05D009526 ORTHO05D011552 5.6e-79 297.7 173 92.5
BcaB08g34975 Brassica carinata HOM05D009526 ORTHO05D011552 2.5e-63 245.7 175 80.6
BcaC07g41164 Brassica carinata HOM05D009526 ORTHO05D011552 2.5e-63 245.7 175 80.6
Sp5g32610 Schrenkiella parvula HOM05D009526 ORTHO05D011552 1.2e-52 210.3 161 74.5
Thhalv10000606m.g Eutrema salsugineum HOM05D009526 ORTHO05D011552 6.3e-46 188.0 170 68.2
CARHR112100 Cardamine hirsuta HOM05D009526 ORTHO05D011552 1.0e-40 170.6 177 59.9
AT2G21237 Arabidopsis thaliana HOM05D009526 ORTHO05D011552 7.4e-39 164.5 178 57.9
AL4G10370 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 2.9e-35 152.5 165 58.2
AL7G10790 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 5.7e-31 138.3 162 53.1
Carub.0004s0028 Capsella rubella HOM05D009526 ORTHO05D011552 1.7e-30 136.7 145 57.9
AL2G17580 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 7.7e-28 127.9 162 48.8
Sp4g00430 Schrenkiella parvula HOM05D009526 ORTHO05D011552 1.3e-27 127.1 81 79.0
Thhalv10027568m.g Eutrema salsugineum HOM05D009526 ORTHO05D011552 1.7e-27 126.7 160 50.6
BcaB03g12231 Brassica carinata HOM05D009526 ORTHO05D011552 3.8e-27 125.6 163 47.2
A08p23950 Brassica napus HOM05D009526 ORTHO05D011552 8.5e-27 124.4 162 47.5
BraA08t34353Z Brassica rapa HOM05D009526 ORTHO05D011552 8.5e-27 124.4 162 47.5
BcaC01g00263 Brassica carinata HOM05D009526 ORTHO05D011552 5.5e-26 121.7 162 46.3
BolC3t19995H Brassica oleracea HOM05D009526 ORTHO05D011552 5.5e-26 121.7 162 46.3
C03p77390 Brassica napus HOM05D009526 ORTHO05D011552 9.4e-26 120.9 162 45.7
AT4G38905 Arabidopsis thaliana HOM05D009526 ORTHO05D011552 2.1e-25 119.8 162 47.5
THA.LOC104807777 Tarenaya hassleriana HOM05D009526 ORTHO05D011552 2.6e-20 102.8 126 48.4
QL11p046590 Quercus lobata HOM05D009526 ORTHO05D011552 2.7e-09 66.2 138 29.7
BcaC02g08806 Brassica carinata HOM05D000624 ORTHO05D000495 4.0e-08 62.4 46 73.9
RhsimUnG0205400 Rhododendron simsii HOM05D030420 ORTHO05D011552 1.2e-07 60.8 68 39.7
Sc16g0010960 Simmondsia chinensis HOM05D009526 ORTHO05D011552 7.5e-07 58.2 80 37.5
Ciclev10030263m.g Citrus clementina HOM05D009526 ORTHO05D011552 1.3e-06 57.4 185 29.2
Duzib132G0500 Durio zibethinus HOM05D009526 ORTHO05D011552 6.3e-06 55.1 171 31.6


User provided reference genes

Program Settings