Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 8.0e-194 680.2 343 100.0
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 8.0e-194 680.2 343 100.0
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 3.3e-192 674.9 343 99.4
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 1.2e-189 666.4 343 97.7
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 6.5e-188 660.6 343 97.1
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 2.7e-173 612.1 343 90.4
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 5.0e-164 581.3 344 86.9
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 8.6e-164 580.5 343 86.0
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 1.9e-163 579.3 344 86.0
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 2.1e-162 575.9 343 85.1
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 3.4e-152 542.0 354 79.9
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 2.9e-135 485.7 345 72.8
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 3.5e-133 478.8 386 68.9
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 1.8e-121 439.9 340 63.5
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 4.0e-121 438.7 341 64.8
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 5.3e-121 438.3 325 66.5
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 5.3e-121 438.3 303 70.3
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 6.9e-121 438.0 330 64.8
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 1.2e-120 437.2 330 64.8
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 1.5e-120 436.8 321 66.0
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 3.4e-120 435.6 340 62.9
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 7.6e-120 434.5 339 64.0
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 1.7e-119 433.3 321 65.4
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 1.4e-118 430.3 329 63.5
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 1.9e-118 429.9 340 62.9
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 2.5e-118 429.5 332 63.9
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 4.2e-118 428.7 309 67.3
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 5.5e-118 428.3 345 63.8
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 5.5e-118 428.3 315 64.8
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 1.6e-117 426.8 321 65.7
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 2.1e-117 426.4 328 64.0
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 3.5e-117 425.6 330 62.7
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 7.9e-117 424.5 331 62.5
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 1.0e-116 424.1 329 65.0
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 1.0e-116 424.1 340 62.1
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 1.3e-116 423.7 334 62.6
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 5.1e-116 421.8 339 62.2
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 6.7e-116 421.4 337 61.4
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.5e-115 420.2 330 63.0
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 1.9e-115 419.9 314 65.3
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 2.5e-115 419.5 340 60.6
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 2.5e-115 419.5 346 61.8
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 3.3e-115 419.1 330 62.7
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 3.3e-115 419.1 323 61.3
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 5.6e-115 418.3 343 59.8
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 5.6e-115 418.3 342 61.1
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 7.4e-115 417.9 360 58.6
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 7.4e-115 417.9 314 65.0
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 2.1e-114 416.4 320 60.9
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 3.7e-114 415.6 306 64.4
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 3.7e-114 415.6 340 59.7
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 3.7e-114 415.6 341 59.8
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 4.8e-114 415.2 314 63.4
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 4.0e-113 412.1 319 62.1
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 5.3e-113 411.8 324 63.3
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 9.0e-113 411.0 314 62.1
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 1.2e-112 410.6 314 62.4
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 2.6e-112 409.5 312 63.5
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 4.5e-112 408.7 314 63.4
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 7.6e-112 407.9 340 60.3
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 1.0e-111 407.5 349 59.9
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 1.3e-111 407.1 314 63.4
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 1.7e-111 406.8 324 62.0
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 2.2e-111 406.4 372 57.5
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 2.2e-111 406.4 315 61.6
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 2.2e-111 406.4 317 60.6
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 6.5e-111 404.8 315 62.9
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 6.5e-111 404.8 324 62.0
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 1.1e-110 404.1 313 61.7
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 1.1e-110 404.1 313 61.7
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 2.5e-110 402.9 315 62.2
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 3.2e-110 402.5 347 58.5
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 4.2e-110 402.1 345 59.1
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 5.5e-110 401.7 311 62.1
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 7.1e-110 401.4 349 60.7
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 1.2e-109 400.6 342 59.1
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 1.6e-109 400.2 330 60.3
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 1.6e-109 400.2 324 62.0
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 2.1e-109 399.8 309 62.8
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 4.6e-109 398.7 313 61.7
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 1.0e-108 397.5 324 60.2
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 1.8e-108 396.7 368 55.7
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 3.0e-108 396.0 341 59.5
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 8.7e-108 394.4 319 60.5
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 8.7e-108 394.4 310 61.3
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.1e-107 394.0 284 66.9
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 1.5e-107 393.7 306 62.1
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 1.4e-105 387.1 310 59.7
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 1.4e-105 387.1 310 59.7
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 2.4e-105 386.3 283 65.0
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 1.5e-104 383.6 313 58.8
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 1.7e-103 380.2 308 60.1
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 2.2e-103 379.8 350 54.3
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 8.5e-103 377.9 320 55.6
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.1e-102 377.5 279 65.9
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 3.2e-102 375.9 319 58.6
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 9.4e-102 374.4 318 58.2
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 1.2e-101 374.0 321 56.7
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 1.2e-101 374.0 310 57.7
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 3.6e-101 372.5 318 58.2
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 4.6e-101 372.1 319 58.3
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 6.1e-101 371.7 323 57.6
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 7.9e-101 371.3 332 56.6
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 1.0e-100 370.9 308 58.4
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 3.0e-100 369.4 332 54.5
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 3.9e-100 369.0 307 58.6
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 5.7e-99 365.2 306 58.8
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 1.3e-98 364.0 279 62.4
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 8.2e-98 361.3 306 56.2
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 3.4e-96 355.9 319 55.2
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 5.0e-95 352.1 330 53.0
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 1.1e-94 350.9 316 55.7
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 1.4e-94 350.5 280 61.8
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 5.5e-94 348.6 306 55.6
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 7.2e-94 348.2 255 66.7
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 5.1e-92 342.0 310 57.1
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 2.0e-91 340.1 271 62.4
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 9.1e-89 331.3 304 55.9
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 3.5e-88 329.3 251 63.3
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 1.4e-86 323.9 310 54.2
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.4e-86 323.9 278 55.0
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 3.2e-86 322.8 308 54.2
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 4.2e-86 322.4 309 50.2
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 8.0e-85 318.2 323 48.0
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 2.2e-82 310.1 303 48.8
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 3.7e-82 309.3 337 49.9
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 3.7e-82 309.3 321 47.4
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 4.8e-82 308.9 337 49.9
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 1.8e-81 307.0 230 63.5
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 9.1e-81 304.7 332 50.0
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 1.5e-78 297.4 313 50.2
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 9.4e-78 294.7 338 45.9
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 4.7e-77 292.4 335 46.9
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 1.3e-74 284.3 328 47.9
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 5.3e-73 278.9 235 55.7
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 2.1e-69 266.9 277 49.5
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 7.5e-67 258.5 213 62.4
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 9.1e-65 251.5 226 58.0
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 4.4e-59 232.6 164 67.1
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 1.7e-58 230.7 322 43.8
TAR381G1258 Trochodendron aralioides HOM05D004652 ORTHO05D005634 9.5e-54 214.9 188 59.6
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 3.9e-47 193.0 162 53.7
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 3.9e-47 193.0 162 53.7
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 2.8e-45 186.8 140 62.9
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 7.1e-41 172.2 334 31.7
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 8.1e-37 158.7 116 63.8
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 8.1e-37 158.7 112 65.2
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 1.9e-33 147.5 308 34.4
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 1.3e-31 141.4 336 31.0
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 2.5e-30 137.1 368 30.4
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 7.3e-30 135.6 112 58.9
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 3.2e-25 120.2 129 48.8
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 6.6e-23 112.5 164 39.6
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 8.4e-18 95.5 168 35.7
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 7.1e-17 92.4 85 54.1
CDE01G0594 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 4.0e-12 76.6 105 39.0
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 5.3e-12 76.3 279 23.3


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