Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 1.1e-98 363.2 182 100.0
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 7.4e-98 360.5 182 99.5
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 8.5e-86 320.5 182 89.6
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 1.9e-69 266.2 156 87.2
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 4.3e-45 185.3 128 72.7
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 6.2e-44 181.4 128 74.2
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 1.8e-43 179.9 129 76.0
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 2.6e-42 176.0 162 60.5
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 3.7e-41 172.2 129 71.3
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 3.8e-33 145.6 136 57.4
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 4.7e-28 128.6 137 51.1
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 1.1e-27 127.5 138 52.2
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 4.4e-26 122.1 128 53.1
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 9.9e-26 120.9 136 47.8
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 2.9e-25 119.4 134 50.0
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 6.4e-25 118.2 139 48.9
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 8.4e-25 117.9 137 48.9
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 1.1e-24 117.5 137 51.1
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 1.4e-24 117.1 134 52.2
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.4e-24 116.3 134 51.5
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 5.4e-24 115.2 138 46.4
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 7.1e-24 114.8 140 45.7
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.2e-23 114.0 134 50.7
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 1.2e-23 114.0 136 46.3
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 1.6e-23 113.6 141 46.8
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.6e-23 113.6 133 51.1
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 3.0e-22 109.4 130 49.2
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 1.5e-21 107.1 136 46.3
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 4.3e-21 105.5 140 43.6
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.3e-21 105.5 139 45.3
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 4.3e-21 105.5 138 47.8
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 4.3e-21 105.5 145 46.2
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 7.3e-21 104.8 142 43.0
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 1.3e-20 104.0 125 44.8
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.3e-20 104.0 139 44.6
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 1.6e-20 103.6 132 47.7
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.1e-20 103.2 139 43.9
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 2.1e-20 103.2 128 47.7
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 3.6e-20 102.4 131 43.5
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 8.1e-20 101.3 141 41.1
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 1.1e-19 100.9 132 43.2
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.8e-19 100.1 144 43.8
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 2.4e-19 99.8 143 45.5
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.4e-19 99.8 147 42.9
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 2.4e-19 99.8 147 42.9
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 2.4e-19 99.8 139 43.9
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 9.0e-19 97.8 144 43.1
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 3.4e-18 95.9 137 42.3
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 4.5e-18 95.5 132 43.9
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 7.6e-18 94.7 132 43.2
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 9.9e-18 94.4 129 45.7
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.3e-17 94.0 132 43.9
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 8.4e-17 91.3 132 42.4
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 1.4e-16 90.5 139 44.6
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 1.9e-16 90.1 132 43.2
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.4e-16 89.7 139 41.7
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 4.2e-16 89.0 126 40.5
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 5.4e-16 88.6 132 41.7
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 5.4e-16 88.6 136 44.1
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 7.1e-16 88.2 110 42.7
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 9.3e-16 87.8 108 45.4
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.2e-15 87.4 89 52.8
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 1.6e-15 87.0 129 41.9
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 2.1e-15 86.7 130 42.3
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 2.7e-15 86.3 147 38.8
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 3.5e-15 85.9 102 45.1
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 1.3e-14 84.0 110 46.4
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 1.8e-14 83.6 126 40.5
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 1.9e-13 80.1 129 41.9
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.9e-13 80.1 93 51.6
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 2.8e-12 76.3 122 43.4
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 3.6e-12 75.9 89 50.6
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 2.4e-11 73.2 107 43.9
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 6.9e-11 71.6 92 46.7
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 7.6e-10 68.2 94 43.6
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 1.3e-09 67.4 105 40.0
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 2.9e-09 66.2 82 52.4
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 7.1e-08 61.6 118 37.3
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 6.0e-07 58.5 140 32.1


User provided reference genes

Program Settings