Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 2.0e-95 352.4 184 100.0
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 2.0e-95 352.4 184 100.0
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 1.0e-94 350.1 184 99.5
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 3.9e-94 348.2 184 98.9
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 1.2e-92 343.2 184 98.4
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 4.3e-77 291.6 190 88.4
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.9e-72 276.2 185 86.5
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 7.1e-72 274.2 187 82.9
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 2.1e-71 272.7 190 84.7
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 3.0e-70 268.9 187 82.4
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.5e-69 266.5 187 82.4
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 1.5e-69 266.5 183 80.9
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 2.8e-68 262.3 183 80.3
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 2.6e-66 255.8 187 79.1
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 2.6e-66 255.8 186 80.1
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 4.9e-65 251.5 188 78.2
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 4.2e-64 248.4 189 76.7
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 5.4e-64 248.1 186 74.2
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 4.6e-63 245.0 185 75.1
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 7.8e-63 244.2 187 77.5
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.0e-62 243.8 186 77.4
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 3.9e-62 241.9 187 77.0
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 2.1e-60 236.1 184 76.6
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 1.8e-59 233.0 183 74.9
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 1.7e-57 226.5 190 71.1
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 6.4e-57 224.6 182 68.7
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 1.9e-56 223.0 195 67.7
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 3.2e-56 222.2 210 66.7
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 4.2e-56 221.9 195 67.7
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 9.3e-56 220.7 160 75.0
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 1.2e-55 220.3 150 79.3
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 3.5e-55 218.8 142 83.8
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 7.9e-55 217.6 153 78.4
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 1.3e-54 216.9 142 82.4
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 1.7e-54 216.5 145 82.1
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 2.3e-54 216.1 143 80.4
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 2.3e-54 216.1 142 81.7
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 2.3e-54 216.1 165 74.5
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 3.9e-54 215.3 141 83.0
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 3.9e-54 215.3 141 83.0
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 3.9e-54 215.3 200 65.5
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 6.6e-54 214.5 152 77.0
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 6.6e-54 214.5 142 80.3
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 8.7e-54 214.2 146 81.5
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 1.1e-53 213.8 142 79.6
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 1.1e-53 213.8 154 74.7
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 1.5e-53 213.4 149 77.9
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 1.9e-53 213.0 153 76.5
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 1.9e-53 213.0 188 68.1
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 2.5e-53 212.6 153 76.5
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 2.5e-53 212.6 142 80.3
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 5.6e-53 211.5 199 62.8
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 7.3e-53 211.1 145 80.7
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 7.3e-53 211.1 147 78.2
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 7.3e-53 211.1 142 81.0
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 9.6e-53 210.7 142 80.3
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 9.6e-53 210.7 142 79.6
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 1.6e-52 209.9 145 78.6
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.1e-52 209.5 182 68.1
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 2.1e-52 209.5 182 68.1
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.1e-52 209.5 145 77.9
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 2.1e-52 209.5 148 77.7
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 2.8e-52 209.1 141 80.9
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 3.6e-52 208.8 145 79.3
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 3.6e-52 208.8 141 79.4
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 3.6e-52 208.8 142 78.9
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 4.8e-52 208.4 137 82.5
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 4.8e-52 208.4 187 68.4
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 4.8e-52 208.4 148 77.0
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 6.2e-52 208.0 143 80.4
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 8.1e-52 207.6 141 78.7
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 1.1e-51 207.2 147 77.6
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.1e-51 207.2 181 67.4
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 1.4e-51 206.8 183 67.8
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 1.4e-51 206.8 197 64.0
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.4e-51 206.8 181 67.4
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.4e-51 206.8 181 67.4
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 1.4e-51 206.8 142 78.9
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 1.4e-51 206.8 162 71.0
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 2.4e-51 206.1 187 67.9
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 2.4e-51 206.1 143 78.3
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 2.4e-51 206.1 167 71.9
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 3.1e-51 205.7 190 65.3
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 3.1e-51 205.7 148 76.4
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 4.0e-51 205.3 142 77.5
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 4.0e-51 205.3 145 77.2
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 4.0e-51 205.3 141 80.1
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 4.0e-51 205.3 142 77.5
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 5.3e-51 204.9 152 75.7
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 5.3e-51 204.9 144 76.4
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 5.3e-51 204.9 187 67.9
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 9.0e-51 204.1 145 76.6
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 9.0e-51 204.1 143 75.5
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.2e-50 203.8 162 72.2
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 1.2e-50 203.8 143 81.1
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 1.5e-50 203.4 189 64.0
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 1.5e-50 203.4 190 63.2
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 2.0e-50 203.0 139 77.7
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 2.6e-50 202.6 145 76.6
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 3.4e-50 202.2 189 64.0
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 3.4e-50 202.2 155 73.5
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 4.5e-50 201.8 199 62.3
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 4.5e-50 201.8 143 76.9
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 4.5e-50 201.8 146 76.7
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 7.6e-50 201.1 175 65.7
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 9.9e-50 200.7 190 63.7
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 9.9e-50 200.7 189 63.5
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 1.7e-49 199.9 141 76.6
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 1.7e-49 199.9 145 74.5
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 2.2e-49 199.5 145 77.9
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 2.9e-49 199.1 143 76.9
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.8e-49 198.7 153 73.2
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 6.4e-49 198.0 141 75.2
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.1e-48 197.2 131 81.7
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.1e-48 197.2 160 72.5
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.9e-48 196.4 113 89.4
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.9e-48 196.4 142 76.1
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 3.2e-48 195.7 114 86.0
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 3.2e-48 195.7 114 86.0
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 5.4e-48 194.9 142 76.8
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 5.4e-48 194.9 142 72.5
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 7.1e-48 194.5 111 90.1
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 9.3e-48 194.1 160 70.6
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 1.2e-47 193.7 142 76.1
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 2.7e-47 192.6 165 67.3
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 2.7e-47 192.6 111 89.2
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.5e-47 192.2 191 62.8
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 6.0e-47 191.4 146 71.2
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 1.3e-46 190.3 113 85.0
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 3.9e-46 188.7 149 70.5
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 1.5e-45 186.8 142 72.5
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 3.3e-45 185.7 160 70.0
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 8.1e-44 181.0 184 59.2
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 5.3e-43 178.3 107 86.0
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 2.6e-42 176.0 109 79.8
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 7.6e-42 174.5 142 62.0
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 7.6e-42 174.5 154 64.3
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 6.5e-41 171.4 141 66.0
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 2.5e-40 169.5 124 76.6
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 4.2e-40 168.7 145 64.1
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 5.5e-40 168.3 140 65.0
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.2e-39 167.2 144 61.8
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 3.9e-38 162.2 187 58.3
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 1.9e-37 159.8 114 71.9
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 3.3e-37 159.1 134 63.4
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 7.4e-37 157.9 128 64.8
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.6e-36 156.8 141 63.8
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.6e-36 156.8 141 63.8
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 3.1e-35 152.5 109 76.1
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 2.6e-34 149.4 155 60.0
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 5.0e-33 145.2 153 60.1
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 8.4e-33 144.4 142 62.0
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 2.5e-32 142.9 108 72.2
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 7.2e-32 141.4 300 36.0
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 3.3e-29 132.5 107 61.7
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 2.6e-26 122.9 102 72.5
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 1.0e-25 120.9 97 74.2
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 3.8e-25 119.0 98 75.5
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 6.5e-25 118.2 152 46.1
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 8.5e-25 117.9 91 73.6
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.1e-24 117.5 106 67.9
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 2.5e-24 116.3 98 74.5
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 2.5e-24 116.3 98 74.5
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 1.1e-19 100.9 86 66.3
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.0e-18 96.7 114 56.1
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 1.4e-16 90.5 49 95.9
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.6e-15 87.0 47 91.5
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 7.9e-15 84.7 86 55.8
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 5.7e-13 78.6 44 88.6
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 1.1e-08 64.3 38 84.2
AagrBONN_evm.TU.Sc2ySwM_368.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.4e-06 57.4 109 39.4
AagrBONN_evm.TU.Sc2ySwM_114.14 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.0e-06 56.2 117 37.6
AagrBONN_evm.TU.Sc2ySwM_114.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.0e-06 56.2 117 37.6
AagrBONN_evm.TU.Sc2ySwM_83.9 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.0e-06 56.2 117 37.6
AagrBONN_evm.TU.Sc2ySwM_344.958 Anthoceros agrestis HOM05D010958 ORTHO05D004381 5.2e-06 55.5 106 38.7
AagrBONN_evm.TU.Sc2ySwM_340.1461 Anthoceros agrestis HOM05D010958 ORTHO05D004381 8.8e-06 54.7 113 36.3


User provided reference genes

Program Settings